View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4565-Insertion-12 (Length: 281)
Name: NF4565-Insertion-12
Description: NF4565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4565-Insertion-12 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 8 - 281
Target Start/End: Original strand, 33817370 - 33817648
Alignment:
| Q |
8 |
gtggataatggtgatttagagttgatgtcaagcactagaagctgtgatgttccatttcatactttgtatgcagatcacataatgatatttcgcaatggga |
107 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
33817370 |
gtggataatggtgatttagagttgatgtcaagcactagaagttgtgatgttccatttcatactttgtatgcagatcacataatgatatttagcaatggga |
33817469 |
T |
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| Q |
108 |
aggcatcttgcataaattcactgataaaccttttcactagatatgcacaggtttctggtca-gtggtcagcaatagcaaatcaactattttctcggggtc |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
33817470 |
aggcatcttgcataaattcactgataaaccttttcactagatatgcacaggtttctggtcaggtggtcagcaatagcaaatcaactattttctcggggtc |
33817569 |
T |
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| Q |
207 |
aatctct----ataatagattacaacatattgttgaccttattggttttcaagtgggttctctaccattcattttgtca |
281 |
Q |
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||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
33817570 |
aatctctaataataatagattacaacatattgttgaccttactggttttcaagtgggttctctaccattcattttgtca |
33817648 |
T |
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