View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4566_high_9 (Length: 326)

Name: NF4566_high_9
Description: NF4566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4566_high_9
NF4566_high_9
[»] chr3 (25 HSPs)
chr3 (3-251)||(22530202-22530451)
chr3 (9-251)||(29549216-29549459)
chr3 (44-245)||(6921069-6921270)
chr3 (246-316)||(17208536-17208606)
chr3 (246-296)||(6156722-6156772)
chr3 (246-308)||(14442187-14442249)
chr3 (246-296)||(2841496-2841546)
chr3 (246-296)||(14520458-14520508)
chr3 (246-289)||(3527154-3527197)
chr3 (246-291)||(22841274-22841319)
chr3 (246-290)||(14641544-14641588)
chr3 (246-286)||(54875474-54875514)
chr3 (246-296)||(5215659-5215709)
chr3 (246-291)||(12917301-12917346)
chr3 (246-287)||(14152398-14152439)
chr3 (246-291)||(45803326-45803371)
chr3 (246-290)||(6159417-6159461)
chr3 (256-296)||(13185917-13185957)
chr3 (256-296)||(19568198-19568238)
chr3 (246-290)||(29907651-29907695)
chr3 (246-290)||(29948817-29948861)
chr3 (246-290)||(29997971-29998015)
chr3 (256-296)||(40808018-40808058)
chr3 (256-296)||(40812855-40812895)
chr3 (256-296)||(44274440-44274480)
[»] chr4 (16 HSPs)
chr4 (44-239)||(54874533-54874728)
chr4 (73-239)||(33096113-33096279)
chr4 (245-293)||(9622500-9622548)
chr4 (246-296)||(14631147-14631197)
chr4 (246-296)||(16296950-16297000)
chr4 (246-290)||(10273395-10273439)
chr4 (246-289)||(55583208-55583251)
chr4 (246-300)||(13847213-13847267)
chr4 (35-116)||(13154250-13154330)
chr4 (246-290)||(9639022-9639066)
chr4 (246-286)||(12424290-12424330)
chr4 (246-287)||(26446219-26446260)
chr4 (256-296)||(15115244-15115284)
chr4 (252-292)||(15239810-15239850)
chr4 (256-296)||(19434549-19434589)
chr4 (246-290)||(25513863-25513907)
[»] scaffold0231 (1 HSPs)
scaffold0231 (246-325)||(17482-17561)
[»] chr5 (8 HSPs)
chr5 (246-325)||(18744886-18744965)
chr5 (256-325)||(6551251-6551320)
chr5 (256-325)||(21617889-21617958)
chr5 (246-290)||(32607312-32607356)
chr5 (246-291)||(16063763-16063808)
chr5 (256-309)||(20469153-20469206)
chr5 (246-290)||(21398640-21398684)
chr5 (246-286)||(23199207-23199247)
[»] chr8 (14 HSPs)
chr8 (246-315)||(21399729-21399798)
chr8 (246-315)||(21794222-21794291)
chr8 (256-325)||(45469180-45469249)
chr8 (256-310)||(6101729-6101783)
chr8 (246-290)||(22208281-22208325)
chr8 (246-290)||(22345176-22345220)
chr8 (246-290)||(22356836-22356880)
chr8 (256-308)||(36727016-36727068)
chr8 (246-296)||(18816285-18816335)
chr8 (256-316)||(23899957-23900017)
chr8 (246-291)||(22610262-22610307)
chr8 (246-287)||(36732411-36732452)
chr8 (246-286)||(18834434-18834474)
chr8 (246-282)||(22483798-22483834)
[»] chr7 (27 HSPs)
chr7 (256-325)||(48807286-48807355)
chr7 (256-325)||(14218856-14218925)
chr7 (246-296)||(708419-708469)
chr7 (246-296)||(15575639-15575689)
chr7 (246-296)||(18874655-18874705)
chr7 (246-296)||(20252172-20252222)
chr7 (247-293)||(47095465-47095511)
chr7 (256-325)||(16078352-16078421)
chr7 (246-290)||(58409-58453)
chr7 (246-290)||(38299760-38299804)
chr7 (246-296)||(3287756-3287806)
chr7 (248-290)||(13744506-13744548)
chr7 (246-291)||(18570659-18570704)
chr7 (246-291)||(33556100-33556145)
chr7 (246-290)||(19195623-19195667)
chr7 (246-286)||(25943279-25943319)
chr7 (246-297)||(8488083-8488134)
chr7 (246-297)||(8513742-8513793)
chr7 (246-293)||(36300634-36300681)
chr7 (246-308)||(15720791-15720853)
chr7 (73-122)||(16541658-16541707)
chr7 (73-122)||(16623955-16624004)
chr7 (246-287)||(43745668-43745709)
chr7 (246-290)||(8930761-8930805)
chr7 (246-290)||(13315078-13315122)
chr7 (256-296)||(20586374-20586414)
chr7 (246-286)||(43276744-43276784)
[»] chr2 (11 HSPs)
chr2 (256-325)||(3539859-3539928)
chr2 (246-296)||(21315466-21315516)
chr2 (246-296)||(21335256-21335306)
chr2 (246-290)||(23801508-23801552)
chr2 (246-287)||(23610638-23610679)
chr2 (38-219)||(24733970-24734151)
chr2 (268-308)||(28652530-28652570)
chr2 (268-325)||(18387704-18387761)
chr2 (246-290)||(149497-149541)
chr2 (246-290)||(21369305-21369349)
chr2 (256-296)||(24516208-24516248)
[»] scaffold0207 (1 HSPs)
scaffold0207 (256-316)||(13362-13422)
[»] scaffold0004 (2 HSPs)
scaffold0004 (246-325)||(111372-111451)
scaffold0004 (246-290)||(75949-75993)
[»] chr6 (9 HSPs)
chr6 (275-325)||(23501713-23501763)
chr6 (246-290)||(10446229-10446273)
chr6 (246-287)||(21683074-21683115)
chr6 (247-290)||(19825482-19825525)
chr6 (246-308)||(18982584-18982646)
chr6 (246-288)||(29045283-29045325)
chr6 (256-296)||(15890702-15890742)
chr6 (246-290)||(23658101-23658145)
chr6 (276-308)||(25601308-25601340)
[»] scaffold0411 (1 HSPs)
scaffold0411 (268-313)||(13390-13435)
[»] scaffold0056 (2 HSPs)
scaffold0056 (256-325)||(67143-67212)
scaffold0056 (246-287)||(18287-18328)
[»] chr1 (16 HSPs)
chr1 (256-325)||(13302924-13302993)
chr1 (246-296)||(50544884-50544934)
chr1 (256-311)||(21239024-21239079)
chr1 (246-291)||(34392780-34392825)
chr1 (246-290)||(8306618-8306662)
chr1 (246-290)||(35895111-35895155)
chr1 (246-290)||(38056668-38056712)
chr1 (246-290)||(45499554-45499598)
chr1 (252-291)||(7703140-7703179)
chr1 (246-288)||(17901792-17901834)
chr1 (246-291)||(20588650-20588695)
chr1 (246-291)||(20593188-20593233)
chr1 (256-296)||(7051912-7051952)
chr1 (246-286)||(22145666-22145706)
chr1 (256-308)||(24723329-24723381)
chr1 (246-290)||(28476730-28476774)
[»] scaffold1186 (1 HSPs)
scaffold1186 (246-296)||(2032-2082)
[»] scaffold0005 (1 HSPs)
scaffold0005 (246-296)||(186186-186236)
[»] scaffold0026 (1 HSPs)
scaffold0026 (268-325)||(146757-146814)
[»] scaffold0676 (1 HSPs)
scaffold0676 (246-290)||(2893-2937)
[»] scaffold0220 (1 HSPs)
scaffold0220 (246-290)||(13961-14005)
[»] scaffold0594 (1 HSPs)
scaffold0594 (246-296)||(2259-2309)
[»] scaffold0108 (1 HSPs)
scaffold0108 (246-308)||(6430-6492)
[»] scaffold0149 (1 HSPs)
scaffold0149 (256-297)||(21633-21674)
[»] scaffold0139 (1 HSPs)
scaffold0139 (246-287)||(23546-23587)
[»] scaffold0048 (1 HSPs)
scaffold0048 (248-293)||(68719-68764)
[»] scaffold0878 (1 HSPs)
scaffold0878 (246-290)||(3418-3462)
[»] scaffold0853 (1 HSPs)
scaffold0853 (246-286)||(2454-2494)
[»] scaffold0431 (1 HSPs)
scaffold0431 (246-286)||(5645-5685)
[»] scaffold0328 (1 HSPs)
scaffold0328 (246-290)||(18636-18680)
[»] scaffold0174 (2 HSPs)
scaffold0174 (246-290)||(19868-19912)
scaffold0174 (246-290)||(5466-5510)
[»] scaffold0061 (2 HSPs)
scaffold0061 (246-290)||(14582-14626)
scaffold0061 (246-290)||(23640-23684)
[»] scaffold0031 (1 HSPs)
scaffold0031 (246-290)||(127339-127383)
[»] scaffold0098 (1 HSPs)
scaffold0098 (246-296)||(40119-40169)
[»] scaffold0205 (1 HSPs)
scaffold0205 (248-293)||(5609-5653)
[»] scaffold0086 (1 HSPs)
scaffold0086 (246-291)||(35181-35226)
[»] scaffold0037 (1 HSPs)
scaffold0037 (256-309)||(112943-112996)
[»] scaffold1941 (1 HSPs)
scaffold1941 (256-296)||(160-200)
[»] scaffold0802 (1 HSPs)
scaffold0802 (256-296)||(4699-4739)
[»] scaffold0555 (1 HSPs)
scaffold0555 (246-290)||(8742-8786)
[»] scaffold0414 (1 HSPs)
scaffold0414 (246-286)||(11160-11200)
[»] scaffold0379 (1 HSPs)
scaffold0379 (246-286)||(10959-10999)
[»] scaffold0241 (1 HSPs)
scaffold0241 (256-296)||(3204-3244)
[»] scaffold0148 (1 HSPs)
scaffold0148 (246-290)||(8856-8900)
[»] scaffold0028 (1 HSPs)
scaffold0028 (268-308)||(3030-3070)


Alignment Details
Target: chr3 (Bit Score: 166; Significance: 8e-89; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 3 - 251
Target Start/End: Complemental strand, 22530451 - 22530202
Alignment:
Q  3 actactactccaccacaccaaaac-caccgtcgcacctcccaccaaccctcgacctcacttctcttccccgtcaccctctttattttttcttcccgcacc 101  Q
    ||||| |||||||||||||||||  |||| || ||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  22530451 actaccactccaccacaccaaaaaacaccctcacacctcccaccaatcctcgacctcacttcccttccccgttaccctctttattttttcttcccacacc 22530352  T
Q  102 tgacaaaacatcaaacctattttaaatatcctcttgaaagtttacccccaacatctttcccacacctttaacatcatccgacatagccttactacttcca 201  Q
    ||||| |||||||||||||||  |||||||| |||| || |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  22530351 tgacagaacatcaaacctattagaaatatccccttggaaatttacccccaacttctttcccatacctttaacatcatccgacatagccttactacttcca 22530252  T
Q  202 tgaagaaccaaccaattcgaccagtcgttattgacagaagattgacaacc 251  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  22530251 tgaagaaccaaccaatttgaccagtcgttattgagagaagattgagaacc 22530202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 9 - 251
Target Start/End: Original strand, 29549216 - 29549459
Alignment:
Q  9 actccaccacaccaaaaccaccgtcg-cacctcccaccaaccctcgacctcacttctcttccccgtcaccctctttattttttcttcccgcacctgacaa 107  Q
    |||| ||||||||||| ||||| ||  ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29549216 actctaccacaccaaacccaccctccacacctcccaccaaccctcggcctcacttctcttccccatcaccctctttattttttcttcccgcacctgacaa 29549315  T
Q  108 aacatcaaacctattttaaatatcctcttgaaagtttacccccaacatctttcccacacctttaacatcatccgacatagccttactacttccatgaaga 207  Q
     |||| ||||||| |||   ||||| ||||||| || |||||||| ||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  29549316 tacattaaacctactttgtgtatccccttgaaaattcacccccaatatctttcccattcctttaacatcatccgaaatagccttactacttccatgaaga 29549415  T
Q  208 accaaccaattcgaccagtcgttattgacagaagattgacaacc 251  Q
    |||||||||||||||||||| ||||| | ||| |||||| ||||    
T  29549416 accaaccaattcgaccagtcattattaatagatgattgagaacc 29549459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 44 - 245
Target Start/End: Complemental strand, 6921270 - 6921069
Alignment:
Q  44 ccaaccctcgacctcacttctcttccccgtcaccctctttattttttcttcccgcacctgacaaaacatcaaacctattttaaatatcctcttgaaagtt 143  Q
    |||||||||||||| |  ||||| | || |||||||||||||||||||| || || |||||||| |||||||||||||||| | ||||| ||||||| ||    
T  6921270 ccaaccctcgaccttaactctctccaccatcaccctctttattttttctaccagctcctgacaacacatcaaacctattttgattatccccttgaaaatt 6921171  T
Q  144 tacccccaacatctttcccacacctttaacatcatccgacatagccttactacttccatgaagaaccaaccaattcgaccagtcgttattgacagaagat 243  Q
     |||| || || ||| ||||  ||  ||||||||||||| | |||||| ||| | |||||||| || ||||||||||||||||| ||||| ||||| |||    
T  6921170 caccctcaccaacttacccatccccctaacatcatccgataaagccttgctattaccatgaagtactaaccaattcgaccagtcattattaacagatgat 6921071  T
Q  244 tg 245  Q
    ||    
T  6921070 tg 6921069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 17208536 - 17208606
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg 316  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17208536 acaactcattattagagaaagctagtcccacccttaccttagattgatcgattgaaaggttctcttctctg 17208606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 6156722 - 6156772
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  6156722 acaacccattattagagaaagctagtcccacccttaccttagattgatcga 6156772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 308
Target Start/End: Original strand, 14442187 - 14442249
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct 308  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||||| ||| ||||||||||    
T  14442187 acaacccattattacagaaagctagtcccacccttaccttagattgattgatcgaaaggttct 14442249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 2841546 - 2841496
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  2841546 acaacccattattagagaaagctagtcacacccttaccttagattgatcga 2841496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 14520458 - 14520508
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  14520458 acaacccattattaaagaaagctagtcccacccttaccttagattgatcga 14520508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 3527197 - 3527154
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagat 289  Q
    |||||||||||||||| ||||||||||| |||||||||||||||    
T  3527197 acaacccattattagagaaagctagtcccacccttaccttagat 3527154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 22841319 - 22841274
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattg 291  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||    
T  22841319 acaacccattattagagaaagctagtcccacccttacattagattg 22841274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 14641588 - 14641544
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||    
T  14641588 acaacccattattagagaaagctaatcccacccttaccttagatt 14641544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 54875514 - 54875474
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttacctta 286  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  54875514 acaacccattattagagaaagctagtcccacccttacctta 54875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 5215659 - 5215709
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    ||||| |||||||||| ||||||||| | |||||||||||| |||||||||    
T  5215659 acaactcattattagagaaagctagtgccacccttaccttatattgatcga 5215709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 12917346 - 12917301
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattg 291  Q
    |||||||||||||||| |||| |||||| ||||||| |||||||||    
T  12917346 acaacccattattagagaaagttagtcccacccttatcttagattg 12917301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 14152439 - 14152398
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttag 287  Q
    ||||| |||||||||| ||||||||||| |||||||||||||    
T  14152439 acaactcattattagagaaagctagtcccacccttaccttag 14152398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 45803371 - 45803326
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattg 291  Q
    |||||||||||||||| ||||||||||| ||||| || ||||||||    
T  45803371 acaacccattattagagaaagctagtcccaccctaactttagattg 45803326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 6159417 - 6159461
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||| ||||  ||||||||||||||||    
T  6159417 acaacccattattagagaaagcgagtctcacccttaccttagatt 6159461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 13185917 - 13185957
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  13185917 attagagaaagttagtcccacccttaccttagattgatcga 13185957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 19568238 - 19568198
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  19568238 attagagaaagttagtcccacccttaccttagattgatcga 19568198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 29907651 - 29907695
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||| ||||| | ||||||||||| ||||||||||||||||    
T  29907651 acaacccaatattaaagaaagctagtcccacccttaccttagatt 29907695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 29948817 - 29948861
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||| ||||| | ||||||||||| ||||||||||||||||    
T  29948817 acaacccaatattaaagaaagctagtcccacccttaccttagatt 29948861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 29997971 - 29998015
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||| ||||| | ||||||||||| ||||||||||||||||    
T  29997971 acaacccaatattaaagaaagctagtcccacccttaccttagatt 29998015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 40808018 - 40808058
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  40808018 attagagaaagttagtcccacccttaccttagattgatcga 40808058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 40812855 - 40812895
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  40812855 attagagaaagttagtcccacccttaccttagattgatcga 40812895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 44274440 - 44274480
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  44274440 attagagaaagttagtcccacccttaccttagattgatcga 44274480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 44 - 239
Target Start/End: Original strand, 54874533 - 54874728
Alignment:
Q  44 ccaaccctcgacctcacttctcttccccgtcaccctctttattttttcttcccgcacctgacaaaacatcaaacctattttaaatatcctcttgaaagtt 143  Q
    |||||||||| ||| || ||||| | || ||| |||||||||||||||||||  |||||||||| |||||||||||||||| ||||||| ||||||| ||    
T  54874533 ccaaccctcggccttacctctctccaccatcaacctctttattttttcttccaacacctgacaacacatcaaacctattttgaatatccccttgaaaatt 54874632  T
Q  144 tacccccaacatctttcccacacctttaacatcatccgacatagccttactacttccatgaagaaccaaccaattcgaccagtcgttattgacaga 239  Q
     |||||||  | ||||||||  ||  ||||||||||||| | |||||| ||| | |||||||| || |||||| |||||||||||| ||| |||||    
T  54874633 cacccccactaactttcccatccccctaacatcatccgataaagccttgctattaccatgaagtactaaccaactcgaccagtcgtaattaacaga 54874728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 239
Target Start/End: Complemental strand, 33096279 - 33096113
Alignment:
Q  73 tcaccctctttattttttcttcccgcacctgacaaaacatcaaacctattttaaatatcctcttgaaagtttacccccaacatctttcccacacctttaa 172  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||  ||| |   ||||| ||||||| || | ||||| || |||||||| | |  |||    
T  33096279 tcaccctctttattttttcttcccgcacctgacaacacatcgaactgattattcttatccccttgaaaattcaaccccaccacctttcccaaatccctaa 33096180  T
Q  173 catcatccgacatagccttactacttccatgaagaaccaaccaattcgaccagtcgttattgacaga 239  Q
    | ||| | |||||| ||| || ||||||||||||| |||||||||||  |||||| ||||| |||||    
T  33096179 cgtcagctgacataacctcaccacttccatgaagagccaaccaattcatccagtcattattaacaga 33096113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 9622500 - 9622548
Alignment:
Q  245 gacaacccattattagaaaaagctagtccgacccttaccttagattgat 293  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  9622500 gacaacccattattagagaaagctagtcccacccttaccttagattgat 9622548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 14631147 - 14631197
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  14631147 acaacccattattagagaaagctagtctcacccttaccttagattgatcga 14631197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 16296950 - 16297000
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  16296950 acaactcattattagagaaagctagtcccacccttaccttagattgatcga 16297000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 10273395 - 10273439
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  10273395 acaacccattattagagaaagctagtcccacccttaccttagatt 10273439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 55583208 - 55583251
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagat 289  Q
    |||||||||||||||| ||||||||||| |||||||||||||||    
T  55583208 acaacccattattagagaaagctagtcccacccttaccttagat 55583251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 13847213 - 13847267
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattga 300  Q
    |||||||||||||||| ||||||||||  ||||||||||||| || |||||||||    
T  13847213 acaacccattattagagaaagctagtctcacccttaccttaggttaatcgattga 13847267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 13154330 - 13154250
Alignment:
Q  35 cacctcccaccaaccctcgacctcacttctcttccccgtcaccctctttattttttcttcccgcacctgacaaaacatcaaa 116  Q
    |||||| |||||||||| | ||| ||||| ||| ||| || ||||||||||||||||||||| | |||||||| ||||||||    
T  13154330 cacctcacaccaacccttggcct-acttccctttcccatctccctctttattttttcttcccacccctgacaacacatcaaa 13154250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 9639022 - 9639066
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||    
T  9639022 acaactcattattagagaaagctagtcccacccttaccttagatt 9639066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 12424330 - 12424290
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttacctta 286  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  12424330 acaacccattattagagaaagctagtcccacccttacctta 12424290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 26446219 - 26446260
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttag 287  Q
    |||||||||||||||| ||||||||||| |||||||| ||||    
T  26446219 acaacccattattagagaaagctagtcctacccttactttag 26446260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 15115244 - 15115284
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  15115244 attagagaaagttagtcccacccttaccttagattgatcga 15115284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 15239850 - 15239810
Alignment:
Q  252 cattattagaaaaagctagtccgacccttaccttagattga 292  Q
    |||||||||| ||||||||||  ||||||||||||||||||    
T  15239850 cattattagagaaagctagtctcacccttaccttagattga 15239810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 19434589 - 19434549
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  19434589 attagagaaagttagtcccacccttaccttagattgatcga 19434549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 25513863 - 25513907
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||| |||||||||| ||||||||||| ||| ||||||||||||    
T  25513863 acaactcattattagagaaagctagtcccaccattaccttagatt 25513907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 246 - 325
Target Start/End: Complemental strand, 17561 - 17482
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  17561 acaatccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctggttctcctc 17482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 18744886 - 18744965
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  18744886 acaacccattattagagaaagttagtcccacccttaccttagattgatcgattgaaaggttcacttctctggttctcctc 18744965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 6551320 - 6551251
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||| |||| |||||  |||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  6551320 attagagaaagttagtctcacccttaccttagattgatcgattgaaaggttatcttctctggttctcctc 6551251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 21617958 - 21617889
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||| |||| |||||| |||||||||||||||| |||||| |||||||||||||||||| | ||||||    
T  21617958 attagagaaagttagtcccacccttaccttagatttatcgatcgaaaggttctcttctctggttctcctc 21617889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 32607356 - 32607312
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  32607356 acaacccattattagagaaagctagtcccacccttaccttagatt 32607312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 16063763 - 16063808
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattg 291  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||    
T  16063763 acaacccattattagagaaaggtagtcccacccttaccttagattg 16063808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 20469206 - 20469153
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctc 309  Q
    |||||| |||| |||||| ||||||||||||||||||||||| ||||| |||||    
T  20469206 attagagaaagttagtcccacccttaccttagattgatcgatcgaaagcttctc 20469153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 21398684 - 21398640
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||    
T  21398684 acaacccattattagagaaagctaatcccacccttaccttagatt 21398640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 23199247 - 23199207
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttacctta 286  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  23199247 acaacccattattagagaaagctagtcccacccttacctta 23199207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 21399729 - 21399798
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctct 315  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||| | ||||||||||||||||||    
T  21399729 acaacccattattagagaaagctagtcccacccttaccttagattgatcaaatgaaaggttctcttctct 21399798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 21794222 - 21794291
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctct 315  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||| | ||||||||||||||||||    
T  21794222 acaacccattattagagaaagctagtcccacccttaccttagattgatcaaatgaaaggttctcttctct 21794291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 45469249 - 45469180
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  45469249 attagagaaagttagtctcacccttaccttagattgatcgattgaaaggttctcttctctggttctcctc 45469180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 6101783 - 6101729
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctct 310  Q
    |||||| |||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  6101783 attagagaaagttagtcccacctttaccttagattgatcgattgaaaggttctct 6101729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 22208281 - 22208325
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  22208281 acaacccattattagagaaagctagtcccacccttaccttagatt 22208325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 22345176 - 22345220
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  22345176 acaacccattattagagaaagctagtcccacccttaccttagatt 22345220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 22356836 - 22356880
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  22356836 acaacccattattagagaaagctagtcccacccttaccttagatt 22356880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 36727068 - 36727016
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct 308  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||||||||||    
T  36727068 attagagaaagttagtctcacccttaccttagattgatcgattgaaaggttct 36727016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 18816335 - 18816285
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||| ||||| ||||||||||| |||||||||||| |||||||||    
T  18816335 acaacccatttttagagaaagctagtcccacccttaccttatattgatcga 18816285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 23900017 - 23899957
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg 316  Q
    |||||| |||| |||||  ||||||||||||||||||||||| ||||| ||||| ||||||    
T  23900017 attagagaaagttagtcacacccttaccttagattgatcgatcgaaagcttctcctctctg 23899957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 22610307 - 22610262
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattg 291  Q
    ||||| |||||||||| |||| |||||| |||||||||||||||||    
T  22610307 acaactcattattagagaaagttagtcccacccttaccttagattg 22610262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 36732452 - 36732411
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttag 287  Q
    |||||||||||||||| ||||||||||  |||||||||||||    
T  36732452 acaacccattattagagaaagctagtcacacccttaccttag 36732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 18834434 - 18834474
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttacctta 286  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  18834434 acaatccattattagagaaagctagtcccacccttacctta 18834474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 22483798 - 22483834
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttac 282  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  22483798 acaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 48807355 - 48807286
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  48807355 attagagaaagttagtcccacccttaccttagattgatcgattgaaaggttctcttctctggttctcctc 48807286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 14218925 - 14218856
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  14218925 attagagaaagttagtctcacccttaccttagattgatcgattgaaaggttctcttctctgattctcctc 14218856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 708469 - 708419
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  708469 acaacccattattagagaaagctagtcccacccctaccttagattgatcga 708419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 15575689 - 15575639
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  15575689 acaacccattattagagaaagctagtcccacccctaccttagattgatcga 15575639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 18874705 - 18874655
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  18874705 acaacccattattagagaaagctagtctcacccttaccttagattgatcga 18874655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 20252222 - 20252172
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  20252222 acaactcattattagagaaagctagtcctacccttaccttagattgatcga 20252172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 47095465 - 47095511
Alignment:
Q  247 caacccattattagaaaaagctagtccgacccttaccttagattgat 293  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  47095465 caacccattattagagaaagctagtcccacccttaccttagattgat 47095511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 16078352 - 16078421
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||| |||| |||||| ||||||||||||  |||| ||||||||||||||||||||||| | ||||||    
T  16078352 attagagaaagttagtcccacccttaccttatcttgaccgattgaaaggttctcttctctggttctcctc 16078421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 58453 - 58409
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  58453 acaacccattattagagaaagctagtcccacccttaccttagatt 58409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 38299760 - 38299804
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  38299760 acaacccattattagagaaagctagtcccacccttaccttagatt 38299804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 3287756 - 3287806
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| ||||||||| ||||||||||  ||||||||||||||||||||||    
T  3287756 acaacctattattagagaaagctagtctcacccttaccttagattgatcga 3287806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 13744548 - 13744506
Alignment:
Q  248 aacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  13744548 aacccattattagagaaagctagtcccacccttaccttagatt 13744506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 18570659 - 18570704
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattg 291  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||    
T  18570659 acaacccattattagagaaagctagtctcacccttaccttagattg 18570704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 33556145 - 33556100
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattg 291  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||    
T  33556145 acaacccattattagagaaagctagtcccacccttatcttagattg 33556100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 19195623 - 19195667
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||    
T  19195623 acaactcattattagagaaagctagtcccacccttaccttagatt 19195667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 25943279 - 25943319
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttacctta 286  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  25943279 acaacccattattagagaaagctagtcccacccttacctta 25943319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 8488134 - 8488083
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgat 297  Q
    |||||||||||||||| |||| |||||| ||||||||||||| || ||||||    
T  8488134 acaacccattattagagaaagttagtcccacccttaccttaggttaatcgat 8488083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 8513793 - 8513742
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgat 297  Q
    |||||||||||||||| |||| |||||| ||||||||||||| || ||||||    
T  8513793 acaacccattattagagaaagttagtcccacccttaccttaggttaatcgat 8513742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 36300681 - 36300634
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgat 293  Q
    |||||||||||||||| ||||||||||  ||| |||||||||||||||    
T  36300681 acaacccattattagagaaagctagtctcacctttaccttagattgat 36300634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 308
Target Start/End: Original strand, 15720791 - 15720853
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct 308  Q
    |||||||||||| ||| ||||||||||| ||| |||||||| |||||| ||| ||| ||||||    
T  15720791 acaacccattatgagagaaagctagtcccacctttaccttaaattgattgatcgaatggttct 15720853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 16541707 - 16541658
Alignment:
Q  73 tcaccctctttattttttcttcccgcacctgacaaaacatcaaacctatt 122  Q
    |||||||| ||||||||||||||||| || ||||| ||||||||| ||||    
T  16541707 tcaccctccttattttttcttcccgctccggacaacacatcaaacatatt 16541658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 16623955 - 16624004
Alignment:
Q  73 tcaccctctttattttttcttcccgcacctgacaaaacatcaaacctatt 122  Q
    |||||||| ||||||||||||||||| || ||||| ||||||||| ||||    
T  16623955 tcaccctccttattttttcttcccgctccggacaacacatcaaacatatt 16624004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 43745668 - 43745709
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttag 287  Q
    ||||| |||||||||| ||||||||||| |||||||||||||    
T  43745668 acaactcattattagagaaagctagtcccacccttaccttag 43745709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 8930805 - 8930761
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| |||  |||||| ||||||||||||||||    
T  8930805 acaacccattattagagaaatgtagtcccacccttaccttagatt 8930761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 13315122 - 13315078
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| |||| |||||  ||||||||||||||||    
T  13315122 acaacccattattagagaaagatagtctcacccttaccttagatt 13315078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 20586374 - 20586414
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  20586374 attagagaaagttagtcccacccttaccttagattgatcga 20586414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 43276784 - 43276744
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttacctta 286  Q
    |||||||||||||||| |||| |||||| ||||||||||||    
T  43276784 acaacccattattagagaaagttagtcccacccttacctta 43276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 3539859 - 3539928
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||| |||| |||||| |||||||||||||||| ||||||||||||||||||||||||| | ||||||    
T  3539859 attagagaaagttagtcccacccttaccttagattcatcgattgaaaggttctcttctctggttctcctc 3539928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 21315516 - 21315466
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  21315516 acaacccattattagagaaagctagtcccacccttaccttagattgatcga 21315466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 21335306 - 21335256
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  21335306 acaacccattattagagaaagctagtcccacccttaccttagattgatcga 21335256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 23801508 - 23801552
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  23801508 acaacccattattagagaaagctagtcccacccttaccttagatt 23801552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 23610638 - 23610679
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttag 287  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  23610638 acaacccattattagagaaagctagtcccacccttaccttag 23610679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 219
Target Start/End: Complemental strand, 24734151 - 24733970
Alignment:
Q  38 ctcccaccaaccctcgacctcacttctcttccccgtcaccctctttattttttcttcccgcacctgacaaaacatcaaacctattttaaatatcctcttg 137  Q
    |||||| | ||||||||||| ||||| ||  ||| |||| |||| || ||||||||||||| |||||||| || |||||| |||| |   ||||| |||     
T  24734151 ctcccaaccaccctcgaccttacttccctaacccatcactctctctaatttttcttcccgctcctgacaacacttcaaacatattatgcttatccccttt 24734052  T
Q  138 aaagtttacccccaacatctttcccacacctttaacatcatccgacatagccttactacttccatgaagaaccaaccaattc 219  Q
    |||    | |||||    |||||||| ||| ||||||||||| |||||  |||| ||| | |||||||||||||||||||||    
T  24734051 aaaagacaaccccactgcctttcccatacccttaacatcatctgacatcaccttgctattaccatgaagaaccaaccaattc 24733970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 28652570 - 28652530
Alignment:
Q  268 tagtccgacccttaccttagattgatcgattgaaaggttct 308  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  28652570 tagtcccacccttaccttagattgatcgatcgaaaggttct 28652530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 18387761 - 18387704
Alignment:
Q  268 tagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||| |||||||| |||||||||||||| ||||| ||||| |||||| | ||||||    
T  18387761 tagtcccacccttactttagattgatcgatcgaaagcttctcctctctggttctcctc 18387704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 149541 - 149497
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||| |||||||||| ||||||||| | ||||||||||||||||    
T  149541 acaactcattattagagaaagctagttccacccttaccttagatt 149497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 21369305 - 21369349
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||| ||||| |||||| |||| ||||||||||||||||    
T  21369305 acaacccattgttagagaaagcttgtcccacccttaccttagatt 21369349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 24516208 - 24516248
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  24516208 attagagaaagttagtcccacccttaccttagattgatcga 24516248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 13422 - 13362
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg 316  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13422 attagagaaagttagtcccacccttaccttagattgatcgattgaaaggttctattctctg 13362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 111372 - 111451
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||||||||||||| |||||||| || |||||||||||||||| |||||| ||||| ||||| |||||| | ||||||    
T  111372 acaacccattattagagaaagctagccccacccttaccttagattaatcgatcgaaagcttctcctctctggttctcctc 111451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 75949 - 75993
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||||||||||| || ||||||||||| ||||||||||||||||    
T  75949 acaacccattattggagaaagctagtcccacccttaccttagatt 75993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 23501713 - 23501763
Alignment:
Q  275 acccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  23501713 acccttaccttagattgatcgattgaaaggttctcttctctggttctcctc 23501763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 10446229 - 10446273
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  10446229 acaacccattattagagaaagctagtcccacccttaccttagatt 10446273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 21683115 - 21683074
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttag 287  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  21683115 acaacccattattagagaaagctagtcccacccttaccttag 21683074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 19825525 - 19825482
Alignment:
Q  247 caacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||    
T  19825525 caacccattattagagaaagctagtctcacccttaccttagatt 19825482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 308
Target Start/End: Original strand, 18982584 - 18982646
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct 308  Q
    |||||||||||||||| |||| || ||| ||| ||||||||||||||| ||||  ||||||||    
T  18982584 acaacccattattagataaagttaatcccaccgttaccttagattgattgattacaaggttct 18982646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 29045283 - 29045325
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttaga 288  Q
    |||||||||||||||| ||||||||||  ||||||||||||||    
T  29045283 acaacccattattagagaaagctagtctcacccttaccttaga 29045325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 15890742 - 15890702
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  15890742 attagagaaagttagtcccacccttaccttagattgatcga 15890702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 23658101 - 23658145
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||| ||||||||  ||||||||||| ||||||||||||||||    
T  23658101 acaacctattattagggaaagctagtcccacccttaccttagatt 23658145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 308
Target Start/End: Complemental strand, 25601340 - 25601308
Alignment:
Q  276 cccttaccttagattgatcgattgaaaggttct 308  Q
    |||||||||||||||||||||| ||||||||||    
T  25601340 cccttaccttagattgatcgatcgaaaggttct 25601308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 268 - 313
Target Start/End: Complemental strand, 13435 - 13390
Alignment:
Q  268 tagtccgacccttaccttagattgatcgattgaaaggttctcttct 313  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  13435 tagtcccacccttaccttagattgatcgattgaaaggttctcttct 13390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 67143 - 67212
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||| |||| |||||| ||| |||||||||||||||| ||||||||||||||||||||| | ||||||    
T  67143 attagagaaagttagtcccacctttaccttagattgatcaattgaaaggttctcttctctggttctcctc 67212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 18287 - 18328
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttag 287  Q
    |||||||||||||||| ||||||||||  |||||||||||||    
T  18287 acaacccattattagagaaagctagtcacacccttaccttag 18328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 13302924 - 13302993
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||| |||| |||||  |||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  13302924 attagagaaagttagtctcacccttaccttagattgatcgattgaaaggttctattctctggttctcctc 13302993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 50544884 - 50544934
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  50544884 acaacccattattagagaaagctagtctcacccttaccttagattgatcga 50544934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 21239079 - 21239024
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctctt 311  Q
    |||||| |||| |||||| |||| ||||||||||||||||||||||||||| ||||    
T  21239079 attagagaaagttagtcccacccataccttagattgatcgattgaaaggttatctt 21239024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 34392780 - 34392825
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattg 291  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||    
T  34392780 acaacccattattagagaaagctagtcacacccttaccttagattg 34392825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 8306618 - 8306662
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| || |||||||||||||    
T  8306618 acaacccattattagagaaagctagtcccactcttaccttagatt 8306662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 35895111 - 35895155
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  35895111 acaacccattattagataaagctagtcctacccataccttagatt 35895155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 38056712 - 38056668
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||    
T  38056712 acaacccattactagagaaagctagtcccacccttaccttagatt 38056668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 45499554 - 45499598
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||    
T  45499554 acaacccattattagagaaagctagtctcacccttaccttagatt 45499598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 7703140 - 7703179
Alignment:
Q  252 cattattagaaaaagctagtccgacccttaccttagattg 291  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  7703140 cattattagagaaagctagtcccacccttaccttagattg 7703179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 17901834 - 17901792
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttaga 288  Q
    |||||||||||||||| ||||||||||  ||||||||||||||    
T  17901834 acaacccattattagagaaagctagtctcacccttaccttaga 17901792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 20588650 - 20588695
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattg 291  Q
    |||||||||||||||| ||||||| ||| |||||||||||| ||||    
T  20588650 acaacccattattagagaaagctaatcccacccttaccttaaattg 20588695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 20593188 - 20593233
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattg 291  Q
    |||||||||||||||| ||||||| ||| |||||||||||| ||||    
T  20593188 acaacccattattagagaaagctaatcccacccttaccttaaattg 20593233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 7051952 - 7051912
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  7051952 attagagaaagttagtcccacccttaccttagattgatcga 7051912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 22145706 - 22145666
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttacctta 286  Q
    |||||||||||||||| |||| |||||| ||||||||||||    
T  22145706 acaacccattattagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 24723381 - 24723329
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct 308  Q
    |||||| |||| |||||| ||||||||||||||||||| ||| | ||||||||    
T  24723381 attagagaaagttagtcccacccttaccttagattgattgatcgcaaggttct 24723329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 28476774 - 28476730
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||| |||||||||| ||| ||||||| ||||||||||||||||    
T  28476774 acaactcattattagagaaatctagtcccacccttaccttagatt 28476730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 2032 - 2082
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  2032 acaacccattattagagaaagctagtctcacccttaccttagattgatcga 2082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 186236 - 186186
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  186236 acaacccattattagagaaagctagtctcacccttaccttagattgatcga 186186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 146757 - 146814
Alignment:
Q  268 tagtccgacccttaccttagattgatcgattgaaaggttctcttctctgctcctcctc 325  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||||||| | ||||||    
T  146757 tagtcccacccataccttagattgatcgattgaaaggttcttttctctggttctcctc 146814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 2893 - 2937
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  2893 acaacccattattagagaaagctagtcccacccttaccttagatt 2937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 13961 - 14005
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  13961 acaacccattattagagaaagctagtcccacccttaccttagatt 14005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 2259 - 2309
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||| ||||    
T  2259 acaacccattattatagaaagctagtcccacccttaccttagattggtcga 2309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 308
Target Start/End: Original strand, 6430 - 6492
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct 308  Q
    ||||| |||||||||| ||||||||||  ||||||||||||||||||| ||| | ||||||||    
T  6430 acaactcattattagagaaagctagtcttacccttaccttagattgattgatcgcaaggttct 6492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 21633 - 21674
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgat 297  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  21633 attagagaaagctagtcccacccttaccttagattgatcgat 21674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 23546 - 23587
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttag 287  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  23546 acaacccattattagagaaagctagtcctacccttaccttag 23587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 68764 - 68719
Alignment:
Q  248 aacccattattagaaaaagctagtccgacccttaccttagattgat 293  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||    
T  68764 aacccattattagagaaaggtagtcccacccttaccttagattgat 68719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 3462 - 3418
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||    
T  3462 acaacgcattattagagaaagctagtcccacccttaccttagatt 3418  T

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Target: scaffold0853 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 2494 - 2454
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttacctta 286  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  2494 acaacccattattagagaaagctagtcccacccttacctta 2454  T

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Target: scaffold0431 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 5645 - 5685
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttacctta 286  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  5645 acaacccattattagagaaagctagtcccacccttacctta 5685  T

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Target: scaffold0328 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 18680 - 18636
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||    
T  18680 acaactcattattagagaaagctagtcccacccttaccttagatt 18636  T

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Target: scaffold0174 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 19868 - 19912
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||    
T  19868 acaacccattattagagaaatctagtcctacccttaccttagatt 19912  T

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Target: scaffold0174; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 5466 - 5510
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||| |||||||||| |||| |||||| ||||||||||||||||    
T  5466 acaactcattattagagaaaggtagtcccacccttaccttagatt 5510  T

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Target: scaffold0061 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 14626 - 14582
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||    
T  14626 acaacccattattagagaaagctagtctcacccttaccttagatt 14582  T

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Target: scaffold0061; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 23684 - 23640
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||    
T  23684 acaacccattattagagaaagctagtctcacccttaccttagatt 23640  T

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Target: scaffold0031 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 127383 - 127339
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||    
T  127383 acaatccattattagagaaagctagtcccacccttaccttagatt 127339  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 40119 - 40169
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||||||||||||| |||| |||||  | ||||||||||||||||||||    
T  40119 acaacccattattagagaaagttagtcgcatccttaccttagattgatcga 40169  T

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Target: scaffold0205 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 5653 - 5609
Alignment:
Q  248 aacccattattagaaaaagctagtccgacccttaccttagattgat 293  Q
    |||||||||||||| || |||||||| |||||||||||||||||||    
T  5653 aacccattattagagaa-gctagtcccacccttaccttagattgat 5609  T

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Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 35226 - 35181
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagattg 291  Q
    |||||||||||||||  ||||||||| | |||||||||||||||||    
T  35226 acaacccattattagggaaagctagtaccacccttaccttagattg 35181  T

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Target: scaffold0037 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 112996 - 112943
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctc 309  Q
    |||||| |||| |||||| ||||||| ||||||||||||||| ||||| |||||    
T  112996 attagagaaagttagtcccacccttatcttagattgatcgatcgaaagcttctc 112943  T

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Target: scaffold1941 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 160 - 200
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  160 attagagaaagttagtcccacccttaccttagattgatcga 200  T

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Target: scaffold0802 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 4739 - 4699
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  4739 attagagaaagttagtcccacccttaccttagattgatcga 4699  T

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Target: scaffold0555 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 8786 - 8742
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    ||||||||||||||||  |||||||||  ||||||||||||||||    
T  8786 acaacccattattagagtaagctagtctcacccttaccttagatt 8742  T

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Target: scaffold0414 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 11200 - 11160
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttacctta 286  Q
    |||||||||||||||| ||||||||||| | ||||||||||    
T  11200 acaacccattattagagaaagctagtcccatccttacctta 11160  T

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Target: scaffold0379 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 10959 - 10999
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttacctta 286  Q
    |||||||||||||||| ||||||||| | ||||||||||||    
T  10959 acaacccattattagagaaagctagttccacccttacctta 10999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 3204 - 3244
Alignment:
Q  256 attagaaaaagctagtccgacccttaccttagattgatcga 296  Q
    |||||| |||| |||||| ||||||||||||||||||||||    
T  3204 attagagaaagttagtccaacccttaccttagattgatcga 3244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 8856 - 8900
Alignment:
Q  246 acaacccattattagaaaaagctagtccgacccttaccttagatt 290  Q
    |||| ||||||||||| ||||||||||| ||||||| ||||||||    
T  8856 acaatccattattagataaagctagtcccacccttaacttagatt 8900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 3070 - 3030
Alignment:
Q  268 tagtccgacccttaccttagattgatcgattgaaaggttct 308  Q
    |||||| ||||||||||| ||||||||||||| ||||||||    
T  3070 tagtcccacccttaccttggattgatcgattgcaaggttct 3030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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