View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5291-Insertion-2 (Length: 855)

Name: NF5291-Insertion-2
Description: NF5291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5291-Insertion-2
NF5291-Insertion-2
[»] chr3 (46 HSPs)
chr3 (346-853)||(45386947-45387430)
chr3 (8-161)||(45386609-45386762)
chr3 (553-853)||(45234415-45234708)
chr3 (8-144)||(45390978-45391114)
chr3 (557-853)||(116626-116915)
chr3 (672-853)||(44555185-44555355)
chr3 (671-853)||(1430207-1430382)
chr3 (678-853)||(54185620-54185788)
chr3 (653-853)||(50615375-50615567)
chr3 (552-853)||(37179872-37180162)
chr3 (671-853)||(45235650-45235825)
chr3 (552-853)||(50614243-50614537)
chr3 (573-853)||(37178658-37178932)
chr3 (552-839)||(32942686-32942965)
chr3 (671-853)||(53396911-53397086)
chr3 (577-853)||(19669420-19669690)
chr3 (552-853)||(27867774-27868066)
chr3 (553-853)||(44557873-44558163)
chr3 (671-853)||(32146817-32146987)
chr3 (671-853)||(117738-117911)
chr3 (552-853)||(32943915-32944204)
chr3 (671-853)||(53439139-53439315)
chr3 (555-853)||(32147904-32148193)
chr3 (742-853)||(37481360-37481467)
chr3 (552-725)||(41786499-41786672)
chr3 (557-725)||(54185304-54185472)
chr3 (740-812)||(53518128-53518197)
chr3 (740-834)||(23917648-23917739)
chr3 (740-834)||(40762476-40762566)
chr3 (552-629)||(117952-118030)
chr3 (741-834)||(23917212-23917301)
chr3 (554-634)||(54185839-54185920)
chr3 (553-628)||(32146698-32146774)
chr3 (740-830)||(14525122-14525208)
chr3 (740-811)||(29348158-29348226)
chr3 (740-813)||(34995421-34995491)
chr3 (555-633)||(50615588-50615666)
chr3 (740-812)||(38173784-38173853)
chr3 (740-812)||(53377617-53377686)
chr3 (747-849)||(8576211-8576309)
chr3 (740-771)||(28769646-28769677)
chr3 (746-833)||(41786404-41786486)
chr3 (747-849)||(41928146-41928244)
chr3 (796-853)||(19601484-19601540)
chr3 (740-769)||(34359563-34359592)
chr3 (747-847)||(52701050-52701146)
[»] chr8 (50 HSPs)
chr8 (552-853)||(13323854-13324148)
chr8 (552-853)||(39337822-39338116)
chr8 (555-853)||(24452405-24452694)
chr8 (556-853)||(21136247-21136534)
chr8 (552-852)||(37707026-37707320)
chr8 (671-853)||(35862855-35863030)
chr8 (575-853)||(36063727-36063996)
chr8 (552-853)||(24451176-24451473)
chr8 (552-853)||(37705832-37706126)
chr8 (552-854)||(35369992-35370285)
chr8 (653-853)||(41281602-41281797)
chr8 (553-853)||(16472689-16472981)
chr8 (553-853)||(16477260-16477552)
chr8 (552-853)||(21135018-21135312)
chr8 (552-853)||(36062499-36062795)
chr8 (552-853)||(13322882-13323174)
chr8 (671-850)||(35369006-35369176)
chr8 (672-851)||(35863968-35864136)
chr8 (552-725)||(21575506-21575679)
chr8 (740-853)||(39336873-39336982)
chr8 (682-853)||(1737385-1737548)
chr8 (552-845)||(41280183-41280469)
chr8 (740-853)||(17842345-17842454)
chr8 (742-834)||(17842793-17842881)
chr8 (740-834)||(41590213-41590303)
chr8 (740-853)||(37967415-37967524)
chr8 (552-629)||(39336712-39336790)
chr8 (740-813)||(43988495-43988565)
chr8 (815-852)||(16478478-16478515)
chr8 (740-812)||(41590680-41590749)
chr8 (740-834)||(8784906-8784996)
chr8 (58-117)||(40578165-40578224)
chr8 (744-833)||(6590595-6590680)
chr8 (575-725)||(16478528-16478677)
chr8 (740-813)||(36126606-36126676)
chr8 (740-812)||(6590146-6590215)
chr8 (552-628)||(35368885-35368962)
chr8 (740-812)||(10409478-10409547)
chr8 (747-847)||(44893744-44893840)
chr8 (552-634)||(1692584-1692667)
chr8 (740-771)||(12667023-12667054)
chr8 (740-810)||(14122090-14122157)
chr8 (552-634)||(42816014-42816097)
chr8 (747-812)||(30133871-30133933)
chr8 (743-810)||(5696257-5696320)
chr8 (740-773)||(9252525-9252558)
chr8 (552-604)||(14840503-14840556)
chr8 (740-812)||(36471167-36471236)
chr8 (552-604)||(42817251-42817304)
chr8 (745-774)||(44802362-44802391)
[»] chr1 (39 HSPs)
chr1 (552-853)||(36249163-36249456)
chr1 (552-853)||(37985907-37986200)
chr1 (671-853)||(12367520-12367694)
chr1 (552-853)||(30981448-30981739)
chr1 (553-853)||(33709249-33709542)
chr1 (554-853)||(36368194-36368489)
chr1 (553-853)||(33708018-33708310)
chr1 (671-853)||(11999534-11999708)
chr1 (553-843)||(37987008-37987290)
chr1 (671-853)||(36362296-36362468)
chr1 (671-853)||(15054496-15054670)
chr1 (671-853)||(46595971-46596144)
chr1 (553-853)||(29231948-29232241)
chr1 (740-853)||(12368534-12368643)
chr1 (553-853)||(36248032-36248324)
chr1 (554-853)||(533914-534208)
chr1 (671-812)||(30982700-30982835)
chr1 (741-853)||(29231208-29231316)
chr1 (553-833)||(15053345-15053617)
chr1 (554-634)||(12368725-12368806)
chr1 (792-853)||(46597079-46597139)
chr1 (740-812)||(46517418-46517487)
chr1 (740-834)||(21794663-21794753)
chr1 (741-834)||(26805367-26805456)
chr1 (740-812)||(30742673-30742742)
chr1 (740-810)||(48410003-48410070)
chr1 (739-853)||(2058958-2059067)
chr1 (740-812)||(41331948-41332017)
chr1 (740-812)||(19791121-19791190)
chr1 (743-834)||(35531117-35531204)
chr1 (740-811)||(42972316-42972384)
chr1 (552-634)||(12251899-12251982)
chr1 (740-810)||(13501087-13501154)
chr1 (747-847)||(25352756-25352852)
chr1 (740-771)||(33752868-33752899)
chr1 (585-634)||(29231069-29231118)
chr1 (552-628)||(36362176-36362253)
chr1 (573-634)||(51839915-51839976)
chr1 (747-812)||(51840106-51840168)
[»] chr5 (40 HSPs)
chr5 (553-854)||(13920953-13921249)
chr5 (653-853)||(13919861-13920054)
chr5 (554-853)||(38693740-38694034)
chr5 (556-852)||(26864933-26865222)
chr5 (671-853)||(8218302-8218477)
chr5 (578-853)||(43441164-43441431)
chr5 (552-853)||(34527409-34527698)
chr5 (552-843)||(26865993-26866275)
chr5 (653-853)||(34526831-34527021)
chr5 (685-851)||(18950960-18951117)
chr5 (742-853)||(41138909-41139016)
chr5 (552-717)||(41140052-41140218)
chr5 (676-853)||(38691802-38691972)
chr5 (552-853)||(8217214-8217501)
chr5 (671-853)||(43440066-43440239)
chr5 (552-634)||(23318050-23318133)
chr5 (553-634)||(41138725-41138807)
chr5 (741-812)||(21837026-21837094)
chr5 (740-812)||(40158147-40158216)
chr5 (740-834)||(8404269-8404359)
chr5 (740-853)||(10463621-10463728)
chr5 (556-634)||(18951158-18951237)
chr5 (740-813)||(4463109-4463179)
chr5 (775-853)||(41139947-41140022)
chr5 (740-812)||(4462294-4462363)
chr5 (740-812)||(42877953-42878022)
chr5 (740-834)||(17742657-17742747)
chr5 (740-853)||(27307702-27307810)
chr5 (740-809)||(4462456-4462522)
chr5 (740-853)||(17742216-17742324)
chr5 (744-812)||(22023411-22023476)
chr5 (555-634)||(23312658-23312738)
chr5 (740-810)||(4425903-4425970)
chr5 (740-810)||(8313092-8313159)
chr5 (747-847)||(3407199-3407295)
chr5 (747-847)||(19332351-19332447)
chr5 (740-770)||(35529800-35529830)
chr5 (747-849)||(40272346-40272444)
chr5 (671-720)||(41138846-41138895)
chr5 (573-634)||(43439969-43440030)
[»] chr2 (46 HSPs)
chr2 (552-853)||(44492579-44492874)
chr2 (573-853)||(20719335-20719612)
chr2 (552-853)||(21438994-21439287)
chr2 (671-853)||(42487972-42488145)
chr2 (553-853)||(23787319-23787611)
chr2 (672-853)||(43933038-43933212)
chr2 (576-853)||(23787847-23788116)
chr2 (671-853)||(1373502-1373676)
chr2 (673-853)||(20701074-20701247)
chr2 (574-853)||(42486773-42487044)
chr2 (556-852)||(3104693-3104983)
chr2 (554-853)||(33001164-33001457)
chr2 (553-854)||(44493803-44494096)
chr2 (653-853)||(3105722-3105912)
chr2 (671-843)||(20721531-20721694)
chr2 (653-853)||(18672064-18672250)
chr2 (671-853)||(20719766-20719940)
chr2 (555-853)||(20720854-20721142)
chr2 (671-853)||(43931958-43932134)
chr2 (571-725)||(33000689-33000843)
chr2 (671-853)||(18673116-18673288)
chr2 (553-634)||(20721735-20721817)
chr2 (552-628)||(1373721-1373797)
chr2 (740-834)||(41121069-41121159)
chr2 (740-812)||(31435920-31435989)
chr2 (741-812)||(4327948-4328016)
chr2 (743-810)||(13027791-13027855)
chr2 (574-629)||(18673331-18673386)
chr2 (740-835)||(41120624-41120715)
chr2 (552-629)||(1373262-1373340)
chr2 (740-829)||(19176644-19176729)
chr2 (741-834)||(35498881-35498970)
chr2 (743-812)||(44287026-44287092)
chr2 (552-604)||(3105952-3106005)
chr2 (740-834)||(14200839-14200929)
chr2 (740-812)||(31771198-31771267)
chr2 (740-772)||(8794799-8794831)
chr2 (671-714)||(21440250-21440291)
chr2 (740-812)||(35498452-35498521)
chr2 (740-834)||(33831999-33832089)
chr2 (747-812)||(3117864-3117926)
chr2 (747-849)||(9111458-9111556)
chr2 (741-771)||(27694423-27694453)
chr2 (552-604)||(18671972-18672025)
chr2 (552-628)||(32317888-32317965)
chr2 (573-634)||(38276062-38276123)
[»] chr4 (47 HSPs)
chr4 (8-144)||(734586-734722)
chr4 (572-850)||(25422991-25423260)
chr4 (552-853)||(33688373-33688667)
chr4 (654-853)||(33689597-33689784)
chr4 (653-853)||(37329699-37329893)
chr4 (552-853)||(44209786-44210081)
chr4 (671-846)||(53570825-53570992)
chr4 (671-853)||(25421882-25422058)
chr4 (671-853)||(31316356-31316531)
chr4 (552-853)||(31317860-31318152)
chr4 (671-853)||(53568971-53569146)
chr4 (671-853)||(11670938-11671112)
chr4 (653-853)||(53571833-53572023)
chr4 (552-853)||(11669818-11670110)
chr4 (573-853)||(25243906-25244178)
chr4 (553-853)||(10322621-10322914)
chr4 (552-847)||(44208573-44208860)
chr4 (672-853)||(10321513-10321686)
chr4 (552-853)||(31470660-31470953)
chr4 (553-853)||(35061129-35061411)
chr4 (553-809)||(15562628-15562877)
chr4 (741-834)||(7491021-7491110)
chr4 (740-812)||(23473824-23473893)
chr4 (573-629)||(45046733-45046789)
chr4 (740-810)||(19522593-19522660)
chr4 (552-722)||(35054882-35055053)
chr4 (553-627)||(40170070-40170145)
chr4 (741-834)||(10085813-10085902)
chr4 (740-812)||(10085368-10085437)
chr4 (575-628)||(31316260-31316313)
chr4 (552-628)||(45045199-45045276)
chr4 (552-608)||(53569320-53569377)
chr4 (553-626)||(53570707-53570780)
chr4 (792-836)||(4850422-4850466)
chr4 (817-853)||(35055079-35055115)
chr4 (552-602)||(10321401-10321452)
chr4 (740-810)||(19523066-19523133)
chr4 (740-771)||(40391118-40391149)
chr4 (747-847)||(48738397-48738493)
chr4 (552-629)||(13086448-13086526)
chr4 (747-847)||(13508756-13508852)
chr4 (740-774)||(43938319-43938353)
chr4 (741-834)||(51395489-51395578)
chr4 (741-811)||(51395958-51396025)
chr4 (792-834)||(55938399-55938440)
chr4 (741-809)||(28448734-28448799)
chr4 (553-629)||(53568852-53568929)
[»] chr7 (42 HSPs)
chr7 (553-853)||(46331671-46331962)
chr7 (671-853)||(33624604-33624779)
chr7 (671-853)||(38199872-38200046)
chr7 (579-853)||(46330522-46330790)
chr7 (552-853)||(33625711-33626003)
chr7 (671-853)||(15131633-15131805)
chr7 (553-853)||(45958962-45959256)
chr7 (553-853)||(38198761-38199053)
chr7 (552-853)||(46043365-46043654)
chr7 (673-853)||(44166963-44167132)
chr7 (653-853)||(45957906-45958096)
chr7 (671-853)||(43083145-43083318)
chr7 (552-853)||(46044596-46044891)
chr7 (740-853)||(3496487-3496596)
chr7 (553-853)||(43084146-43084434)
chr7 (671-853)||(3495476-3495647)
chr7 (581-725)||(44168205-44168348)
chr7 (671-725)||(15130560-15130612)
chr7 (740-834)||(47792176-47792266)
chr7 (792-853)||(15130642-15130702)
chr7 (573-634)||(43830672-43830733)
chr7 (552-628)||(43831969-43832046)
chr7 (740-812)||(6588569-6588638)
chr7 (556-634)||(33624487-33624566)
chr7 (747-847)||(38595304-38595400)
chr7 (741-834)||(38159282-38159371)
chr7 (685-722)||(3496609-3496646)
chr7 (573-638)||(43309626-43309691)
chr7 (553-629)||(45957805-45957882)
chr7 (740-812)||(21109692-21109761)
chr7 (740-812)||(35482400-35482469)
chr7 (740-810)||(38158831-38158898)
chr7 (554-629)||(43083029-43083104)
chr7 (740-774)||(43574121-43574155)
chr7 (740-774)||(44080840-44080874)
chr7 (747-812)||(8832597-8832659)
chr7 (553-629)||(15131848-15131925)
chr7 (793-834)||(22378383-22378423)
chr7 (740-812)||(22378803-22378871)
chr7 (741-774)||(29156345-29156378)
chr7 (552-636)||(38200081-38200166)
chr7 (800-853)||(44168083-44168135)
[»] scaffold0097 (5 HSPs)
scaffold0097 (573-853)||(23173-23450)
scaffold0097 (671-843)||(25359-25522)
scaffold0097 (671-853)||(23604-23778)
scaffold0097 (653-853)||(24692-24881)
scaffold0097 (553-634)||(25564-25646)
[»] chr6 (31 HSPs)
chr6 (552-853)||(22971591-22971887)
chr6 (552-853)||(23816511-23816807)
chr6 (553-853)||(17246385-17246677)
chr6 (555-853)||(5079811-5080101)
chr6 (672-853)||(18503283-18503455)
chr6 (572-853)||(3335471-3335744)
chr6 (653-853)||(5078796-5078989)
chr6 (653-853)||(8231002-8231195)
chr6 (671-853)||(22972092-22972264)
chr6 (671-853)||(23816134-23816306)
chr6 (740-843)||(17244422-17244521)
chr6 (552-634)||(7855403-7855486)
chr6 (740-812)||(861704-861773)
chr6 (740-812)||(30492604-30492673)
chr6 (553-636)||(7852247-7852331)
chr6 (740-835)||(17697264-17697355)
chr6 (740-834)||(5974183-5974273)
chr6 (552-634)||(15119355-15119438)
chr6 (743-834)||(18804110-18804198)
chr6 (743-812)||(861235-861301)
chr6 (740-853)||(2087321-2087429)
chr6 (740-774)||(20898359-20898393)
chr6 (740-812)||(939187-939256)
chr6 (740-812)||(14256489-14256558)
chr6 (740-854)||(15721368-15721478)
chr6 (740-770)||(6197806-6197836)
chr6 (740-853)||(11400373-11400482)
chr6 (747-847)||(3913148-3913244)
chr6 (793-834)||(22731922-22731962)
chr6 (740-813)||(22732341-22732410)
chr6 (743-811)||(30660664-30660729)
[»] scaffold0651 (2 HSPs)
scaffold0651 (575-853)||(7167-7437)
scaffold0651 (552-853)||(5518-5810)
[»] scaffold0093 (1 HSPs)
scaffold0093 (552-843)||(49071-49353)
[»] scaffold0148 (2 HSPs)
scaffold0148 (654-853)||(35075-35266)
scaffold0148 (653-853)||(38683-38875)
[»] scaffold0385 (2 HSPs)
scaffold0385 (671-853)||(9244-9415)
scaffold0385 (671-853)||(10254-10427)
[»] scaffold0003 (3 HSPs)
scaffold0003 (553-725)||(239206-239379)
scaffold0003 (671-853)||(240303-240476)
scaffold0003 (792-853)||(239423-239483)
[»] scaffold0287 (2 HSPs)
scaffold0287 (740-853)||(28-137)
scaffold0287 (685-722)||(150-187)
[»] scaffold0125 (2 HSPs)
scaffold0125 (740-812)||(21890-21959)
scaffold0125 (740-774)||(21633-21667)
[»] scaffold0514 (2 HSPs)
scaffold0514 (741-812)||(6519-6587)
scaffold0514 (743-833)||(6059-6145)
[»] scaffold0036 (1 HSPs)
scaffold0036 (740-853)||(17680-17790)
[»] scaffold0005 (1 HSPs)
scaffold0005 (552-634)||(282610-282693)
[»] scaffold1191 (1 HSPs)
scaffold1191 (740-834)||(998-1087)
[»] scaffold1190 (2 HSPs)
scaffold1190 (743-833)||(80-166)
scaffold1190 (741-812)||(535-603)
[»] scaffold0233 (2 HSPs)
scaffold0233 (740-771)||(16832-16863)
scaffold0233 (741-770)||(17066-17095)
[»] scaffold0627 (1 HSPs)
scaffold0627 (741-811)||(6816-6883)


Alignment Details
Target: chr3 (Bit Score: 248; Significance: 1e-137; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 346 - 853
Target Start/End: Original strand, 45386947 - 45387430
Alignment:
Q  346 gttatcattaaaaacctctcccatggcttcaagtttcacaaaaggaatctgcctctaagataagcttcgtgcaactatcacttatgccgtctttgccttc 445  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45386947 gttatcattagaaacctctcccatggcttcaagtttcacaaaaggaatctgcctctaagataagcttcgtgcaactatcacttatgccgtctttgccttc 45387046  T
Q  446 tctctcgcttttgtatactactgctaaagtacacctctatagtactactctatgatatgctaaatcctatatttataatctcatttttagtattatannn 545  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||       
T  45387047 tctctcgcttttgtatactactgctaaagtacacctctatagtactactctatgatatgctaaatcc--tatttataatctcatttttagtattata-tt 45387143  T
Q  546 nnnnnnagggttaattaggttttacgt-cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacg-nnnnn 643  Q
          ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           ||||||||||||||||||||          
T  45387144 ttttttagggttaattaggttttacgtccctataaataggcgcgtttccaacattagtccata----------cttaaatttttgatcccaacgtttttt 45387233  T
Q  644 nncaattaggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggt 743  Q
      | |||| ||||||||||| |  |  ||||||||||||||||||||||||||||     ||||||||||||||||||||||          ||| ||||    
T  45387234 ttctatta-gcaaaataggtccttagtgttaattgttgctgattgagcaaacggt-----acacgtggatgccacatctgac--ttttttttgtt-gggt 45387324  T
Q  744 taaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgca 843  Q
    | |||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| |    
T  45387325 tgaatatgtttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gatgttttagtctttacaaaaatactatgta 45387420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 45386609 - 45386762
Alignment:
Q  8 cctttcacaaccaccatatgagatttgcaatcagttatcacttcttcaacacctggaaaatctttcaatgaccgacgaactttccgagcacagccttcac 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45386609 cctttcacaaccaccatatgagatttgcaatcagttatcacttcttcaacacctggaaaatctttcaatgaccgacgaactttccgagcacagccttcac 45386708  T
Q  108 aatgcatgaaaattctcagcaaaatctctgctggaggcggtggagttgcagcag 161  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45386709 aatgcatgaaaactctcagcaaaatctctgctggaggcggtggagttgcagcag 45386762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 553 - 853
Target Start/End: Original strand, 45234415 - 45234708
Alignment:
Q  553 gggttaattaggttttacgtcctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaatta 651  Q
    |||||||||| |||||| |||||||||||||| ||||||||||||||||||| ||  ||||| ||||||||||||||||||| ||||       |  |||    
T  45234415 gggttaattatgttttaggtcctataaataggtgcgtttccaacattagtccctacttaaattttattaaatttttgatccccaacgtttttttccgtta 45234514  T
Q  652 ggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatg 751  Q
    | ||||||||||   | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||| |||||||||    
T  45234515 g-caaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgactttttttt--gttggg-ttaaatatg 45234610  T
Q  752 tttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtat 851  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  45234611 tttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatactatgcactaagtat 45234706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 45390978 - 45391114
Alignment:
Q  8 cctttcacaaccaccatatgagatttgcaatcagttatcacttcttcaacacctggaaaatctttcaatgaccgacgaactttccgagcacagccttcac 107  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  45390978 cctttcacaaccaccgtatgagacttgcaatcagttatcacttcttcaacacctggaaaatctttcaacgaccgacgaactttccgagcacagctttcac 45391077  T
Q  108 aatgcatgaaaattctcagcaaaatctctgctggagg 144  Q
    |||||||||||| | |||||||||||||||| |||||    
T  45391078 aatgcatgaaaactttcagcaaaatctctgccggagg 45391114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 557 - 853
Target Start/End: Original strand, 116626 - 116915
Alignment:
Q  557 taattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaattaggc 654  Q
    |||||| |||||| |||| |||||||| ||| ||||||||||||||||| ||  ||||| |||||||||||||| |||| ||||       |  |||| |    
T  116626 taattatgttttaggtccctataaataagcgtgtttccaacattagtccctacttaaattttattaaatttttggtccccaacgtttttttccgttag-c 116724  T
Q  655 aaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgttt 754  Q
    || |||||| | | | |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||          |||||| ||||||||||||    
T  116725 aatataggtcctcgctgttaattgttgctgcttgagtaaacggcgaagcacacgtggatgccacatctgacttttttt---gttggg-ttaaatatgttt 116820  T
Q  755 ttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||||||||||||||| |||| |||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  116821 ttagtccctataaaatggagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcaatatta 116915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 672 - 853
Target Start/End: Original strand, 44555185 - 44555355
Alignment:
Q  672 ttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaatt 771  Q
    |||||||||| |||||||||||||||    ||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||||    
T  44555185 ttaattgttgttgattgagcaaacgg----gcacacgtggatgccacatctgacttttttt---gttggg-ttaaatatgtttttagtccctataaaatt 44555276  T
Q  772 gagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||| ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  44555277 gagg-cattttaaagtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagtatta 44555355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 1430382 - 1430207
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||           ||  ||||||||||||||||||||||| ||||||    
T  1430382 gttaattgttgctgattgagcaaacggtgaagcacacatggatgccacatctgaccttttttt---ttttggttaaatatgtttttagtccctgtaaaat 1430286  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||  ||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  1430285 tgagg-cattttaa-gtttaa-tccttacttaattttaatagt-tgttttagtcctttcaaaaatactatgcactcagtatta 1430207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 678 - 853
Target Start/End: Complemental strand, 54185788 - 54185620
Alignment:
Q  678 gttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattgagggc 777  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||||||  |    
T  54185788 gttgttgattgagcaaacggtgaagcacacgtggatgccacatctgactttttttt--gttggg-ttaaatatgtttttagtccctataaaattgaga-c 54185693  T
Q  778 attttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||||| |||||| ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||    
T  54185692 attttaa-gtttag-tccttacttaattttaatagt-tgttttagtcattacaaaaatactatgcactcagtatta 54185620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 653 - 853
Target Start/End: Complemental strand, 50615567 - 50615375
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    ||||||||||| | | | |||||||||||||||||||||||||||  ||||||||||||||||||||||||||          |||||| ||||||||||    
T  50615567 gcaaaataggtcctcgctgttaattgttgctgattgagcaaacgg--aagcacacgtggatgccacatctgacttttttttt-gttggg-ttaaatatgt 50615472  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||| ||||    
T  50615471 ttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatacaatgcattcaatatt 50615376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 552 - 853
Target Start/End: Complemental strand, 37180162 - 37179872
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||||||||| ||||||||||||||||| ||  ||||| |||||||||||||| |||| ||||       | ||    
T  37180162 agggttaattacgttttaggtccctataaataggcgtgtttccaacattagtccctacttaaattttattaaatttttggtccccaacgtttttttccat 37180063  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| |||||||||| |   |  |||||||||||||||||||||||||| |||||||||  ||||||||||||||||           ||   ||  ||||    
T  37180062 tag-caaaataggtccttgctattaattgttgctgattgagcaaacggagaagcacacaaggatgccacatctgacttt--------tttttgtataata 37179972  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    ||||||||||||||  |||||||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  37179971 tgtttttagtccctgcaaaattgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatattatgcactcagt 37179876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 45235825 - 45235650
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || || ||||          ||| || ||||||||||||||||||||||||||||    
T  45235825 gttaattgttgctgattgagcaaatggtgaagcacacgtggatgtcatatttgacgttttttt--gttagg-ttaaatatgtttttagtccctataaaat 45235729  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  45235728 tgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactacgcactcagtatta 45235650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 50614243 - 50614537
Alignment:
Q  552 agggttaattaggttttacgtc-ctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    |||||||| || |||||| ||| |||||||||||||||||| |||||||||||| ||  ||||| |||||||||||||| |||| |||        |  |    
T  50614243 agggttaaatatgttttaagtctctataaataggcgcgttttcaacattagtccctacttaaattttattaaatttttggtccccaacatttttttcctt 50614342  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||  ||||||||||   | | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||          |||||| |||||||    
T  50614343 taa-caaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgtcacatctgacttttttt---gttggg-ttaaata 50614437  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    | ||||||||| |||||||||||| |||||||| ||||||| ||||||| |||||||||||| | ||||||| |||||||||||||| ||| ||||||||    
T  50614438 tatttttagtctctataaaattga-ggcatttt-aagttta-gtccttatttaattttaata-gttgttttaatccttacaaaaatattatacactcagt 50614533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 573 - 853
Target Start/End: Original strand, 37178658 - 37178932
Alignment:
Q  573 cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnn-caattaggcaaaataggttcccacc 670  Q
    |||||||||||||| ||||||||||||| ||||||  ||||| ||||||||||||||||||| ||||        |  ||||  ||||||||| | |       
T  37178658 cctataaataggcgtgtttccaacattaatccatacttaaattttattaaatttttgatccccaacgttttttttccgttagt-aaaataggtcctcgtt 37178756  T
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||| |||||||| |||    
T  37178757 gttaattgttgctaattgagcaaacggtgaagcacacgtggatgccacatctgactttttctt--gttggg-ttaaatatgtttttaatccctatacaat 37178853  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| ||||||| |||||||||||||||||||| | |||| |||| |||||||||||| |||||||||| |||||    
T  37178854 tga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttatagttcttacaaaaatattatgcactcaatatta 37178932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 552 - 839
Target Start/End: Original strand, 32942686 - 32942965
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||| ||||  ||||| ||||||||||| ||  ||||| ||||||||||||||||||| ||||       |  |    
T  32942686 agggttaattatgttttaggtccctataaagaggcatgtttctaacattagtccctacttaaattttattaaatttttgatccccaacgttttttccg-t 32942784  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    |||  ||||||||| | | | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||          |||||| |||||||    
T  32942785 taga-aaaataggtcctcgctgttaattgttgctgattgagcaaacagtgaagcacacgtggatgccacatctgacttttttt---gttggg-ttaaata 32942879  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    ||||||| ||||||||| |||||| ||||||||  |||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  32942880 tgttttttgtccctatataattga-ggcatttt-gagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatacta 32942965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 53396911 - 53397086
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||          |||||  ||||||||||||||||||||||||||||    
T  53396911 gttaattgttgttgattgagcaaacggtgaagcacacgtggatgtcacatctaactttttttt--gttgga-ttaaatatgtttttagtccctataaaat 53397007  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||  |||| ||| |||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  53397008 tgaga-cattataa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatattatgcactcagtatta 53397086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 577 - 853
Target Start/End: Original strand, 19669420 - 19669690
Alignment:
Q  577 taaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatc-ccaacgnnnnnnn--caattaggcaaaataggttcccaccgtt 673  Q
    |||||||||||||||||||||||||||| ||  ||||| ||||||||||||||||| ||||||         |  ||||  ||||||||| | | | |||    
T  19669420 taaataggcgcgtttccaacattagtccctacttaaattttattaaatttttgatctccaacgtttttttttcggttagt-aaaataggtcctcgctgtt 19669518  T
Q  674 aattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattga 773  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||          |||||| ||||||||||||| |||||| ||||||||||    
T  19669519 aattgttgctgattgagcaaacggtgaagcacacgcggatgccacttctaactttttttt--gttggg-ttaaatatgttttaagtccccataaaattga 19669615  T
Q  774 gggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    || ||||||||  |||  |||||||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  19669616 gg-cattttaa--ttttagtccttacttaattttaatag--ttgtttaatccttacaaaaatactatgcactcagtatta 19669690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 27867774 - 27868066
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcc-caacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||||||||| |||| |||||||||| ||||  ||||| |||||||||||||| ||| |||||       |  |    
T  27867774 agggttaattatgttttaggtccctataaataggcgagttttcaacattagttcatacttaaattttattaaatttttggtcctcaacgtttttttccgt 27867873  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
       ||||||||||| | |   |||||||||||||||||  |||||||||||||||||| |||||||||||||||||           ||  | |||||||    
T  27867874 a--gcaaaataggtcctcgttgttaattgttgctgattaggcaaacggtgaagcacacatggatgccacatctgactttctt-----ttttgcttaaata 27867966  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||| ||||||||||  |||||||| |||||| || |||||||||||||||||  ||||||||||||||||||| |||||||||||||||    
T  27867967 tgtttttagtccctgtaaaattgaga-cattttaa-gtttag-tcattacttaattttaatagt-tgttttagtccttacaaaattactatgcactcagt 27868062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 553 - 853
Target Start/End: Complemental strand, 44558163 - 44557873
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccca-acgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| ||||||||| |||||||||||||||||||| ||  ||||| |||||||||||||  ||||  |||       |  ||    
T  44558163 gggttaattatgttttaggtccctataaatagacgcgtttccaacattagtccctacttaaattttattaaatttttcgtccctgacgttttttccg-tt 44558065  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || ||||||||||   | | ||||||||||||||||||||||||| |  ||| ||||| ||||||||||||||||          |||||| ||||||||    
T  44558064 ag-caaaataggtcttcgctgttaattgttgctgattgagcaaacag--aagaacacgcggatgccacatctgacttttttt---gttggg-ttaaatat 44557972  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||||| |||||| ||| ||    
T  44557971 gtttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatattatgcattcaata 44557876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 32146817 - 32146987
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||          ||| |||||||||||||||||||||||||||||||    
T  32146817 gttaattgttgctgattgagcaaacggtgaatcacacgtggatgccacatctgac-tgtttttttgtt-gggttaaatatgtttttagtccctataaaat 32146914  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| ||||||| ||| |||||||||||||||||       | || |||||||||||| ||||||||||||||||    
T  32146915 tga-ggcatttt-aagttta-gtcattacttaattttaatag-------ttgttcttacaaaaatattatgcactcagtatta 32146987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 117911 - 117738
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||| |||||||||||||||  ||||||||||||||||||||||||||          |||||| |||||||||||||||||  |||||||||    
T  117911 gttaattgttgttgattgagcaaacgg--aagcacacgtggatgccacatctgactttttttt--gttggg-ttaaatatgtttttagtttctataaaat 117817  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||| | ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||    
T  117816 tgagg-cattttaa-gtttag-tgcttacttaattttaatagt-tgttttagtccttacaaaaatactatgcattcaatatta 117738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 552 - 853
Target Start/End: Complemental strand, 32944204 - 32943915
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| ||||||||||| |||||  ||||||||||  ||  ||||| |||||||||||||| | |  ||||       | ||    
T  32944204 agggttaattatgttttaggtccctataaataggcacgtttttaacattagtctctacttaaattttattaaatttttggttcttaacgtttttttccat 32944105  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| |||||||| | | ||| ||||||||||||||||||||||||||||||||||||| | |||| ||||||||||           ||   ||||||||    
T  32944104 tag-caaaatagttcctcactgttaattgttgctgattgagcaaacggtgaagcacac-tagatgtcacatctgactttt-------tttttgttaaata 32944014  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||| ||||||||| |||||||| ||||||| |||||||||||||||||||| | |||||||||||||| |||||| |||||||||||||    
T  32944013 tgtttttagtccctgtaaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttataaaaat-ctatgcactcagt 32943919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 53439139 - 53439315
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||           || || ||||||||||||||||| ||||||||||    
T  53439139 gttaattattgttgattgagcaaacggtgaagcacacgtggatgtcacatctgacttttttttt--tttggattaaatatgtttttagttcctataaaat 53439236  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||  |||| ||| |||||| | ||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  53439237 tgaga-cattataa-gtttag-tacttacttaattttaatagt-tgttttagtccttacaaaaatattatgcactcagtatta 53439315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 555 - 853
Target Start/End: Complemental strand, 32148193 - 32147904
Alignment:
Q  555 gttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcc-caacgnnnnnnncaattag 652  Q
    |||||||| |||||| |||| ||||||||||||  |||||||||||||| | | | ||||| |||||||||||||  ||| |||||       |  |||     
T  32148193 gttaattatgttttaggtccctataaataggcgtatttccaacattagttcctgtttaaattttattaaattttttgtcctcaacgtttttttctgtta- 32148095  T
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
     |||||||||| | | | ||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||           ||   |||||||||||    
T  32148094 tcaaaataggtcctcgcagttaattgttgctgattaagcaaacggtgaagcacaaatggataccacatctgacttttt------tttttgttaaatatgt 32148001  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||  ||||||||| |||||||| |||||||  | ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  32148000 ttttagtccccgtaaaattga-ggcatttt-aagttta-attcttacttaattttaata-gttgttttattccttacaaaaatactatgcactcagtatt 32147905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 742 - 853
Target Start/End: Complemental strand, 37481467 - 37481360
Alignment:
Q  742 gttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatg 841  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||  |||||| |||||||||||| | ||||||||| ||||||||||||  |||    
T  37481467 gttaaatatgtttttagtccctataaaattga-ggcatttt-aagttta-atccttatttaattttaata-gttgttttagtgcttacaaaaatatcatg 37481372  T
Q  842 cactcagtatta 853  Q
    ||||||| ||||    
T  37481371 cactcagaatta 37481360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 552 - 725
Target Start/End: Complemental strand, 41786672 - 41786499
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| ||||||  ||| | ||||||||   ||||||||||||| ||| ||  ||||| ||||||||||||||||||| ||||       || |    
T  41786672 agggttaattatgttttagatccctgtaaataggtttgtttccaacattattccctacttaaattttattaaatttttgatccccaacgtttttttca-t 41786574  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgac 725  Q
    ||| ||||||||||   ||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  41786573 tag-caaaataggtcatcactgttaattgttgctgattgagcaaacggtgaagcatacatggatgccacatctgac 41786499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 557 - 725
Target Start/End: Original strand, 54185304 - 54185472
Alignment:
Q  557 taattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcc-caacgnnnnnnncaattaggc 654  Q
    |||||| |||||| ||||| ||||||||||||||||||||||||||| | ||  ||||| |||||||||||||| ||| |||||       |  |||| |    
T  54185304 taattatgttttaggtccttataaataggcgcgtttccaacattagttcctacttaaattttattaaatttttggtccacaacgtttttttcg-ttag-c 54185401  T
Q  655 aaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgac 725  Q
    |||||||||   | | ||||||||||| ||||| ||||||||||||||||||| ||||||||||| |||||    
T  54185402 aaaataggtcatcgctgttaattgttggtgattaagcaaacggtgaagcacacatggatgccacacctgac 54185472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 53518197 - 53518128
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||||||||||||||||||| || | |||| ||||||| |||||||||||||||||||||    
T  53518197 gggttaaatatgtttttagtccctataaaattg-ggacctttt-aagttta-gtccttacttaattttaatag 53518128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 740 - 834
Target Start/End: Complemental strand, 23917739 - 23917648
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||| ||||| |||||||||||||||||   ||||  |||||||| ||||||||||||||||||||| | |||||||||  |||||||    
T  23917739 gggttaaatatttttttggtccctataaaattgaga--atttctaagtttag-tccttacttaattttaataggtttttttagtccccacaaaaa 23917648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 740 - 834
Target Start/End: Original strand, 40762476 - 40762566
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||| |||||||||| |||||||||  ||| ||||| ||||||| |||||||||||||||||||||| | ||||||||| || |||||    
T  40762476 gggttaaatatatttttagtccttataaaatt--gggaatttttaagttta-gtccttacttaattttaatagg-ttttttagtccctagaaaaa 40762566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 552 - 629
Target Start/End: Complemental strand, 118030 - 117952
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttg 629  Q
    ||||||||||| |||||| |||| |||||||||||| ||||||||||||||||  ||  ||||| ||||||||||||||    
T  118030 agggttaattatgttttaggtccctataaataggcgtgtttccaacattagtctctacttaaattttattaaatttttg 117952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 741 - 834
Target Start/End: Original strand, 23917212 - 23917301
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    |||||||||||||||| ||| |||||||||||||  |  ||| ||||||| |||||||||||||||||||| | | ||||||||||||||||||    
T  23917212 ggttaaatatgtttttggtctctataaaattgagatc--ttttaagttta-gtccttacttaattttaata-gttcttttagtccttacaaaaa 23917301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 554 - 634
Target Start/End: Complemental strand, 54185920 - 54185839
Alignment:
Q  554 ggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||||| |||||| || || ||||||||||| |||| |||||||| ||||||  ||||| |||||||||||||||||||    
T  54185920 ggttaattatgttttatgttcttataaataggcgtgttttcaacattaatccatacttaaattttattaaatttttgatccc 54185839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 628
Target Start/End: Original strand, 32146698 - 32146774
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaattttt 628  Q
    |||||||||| |||||| |||| ||||||||||||  |||||||||||||| ||||  ||||| |||||||||||||    
T  32146698 gggttaattatgttttaggtccatataaataggcgtatttccaacattagttcatacttaaattttattaaattttt 32146774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 740 - 830
Target Start/End: Complemental strand, 14525208 - 14525122
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttaca 830  Q
    ||||||||||||||||| ||||||||||| ||  ||| ||||  ||||||| |||||||||||||||||||||| | ||||||||| ||||    
T  14525208 gggttaaatatgtttttcgtccctataaattt--gggaatttctaagttta-gtccttacttaattttaatagg-ttttttagtccctaca 14525122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 740 - 811
Target Start/End: Original strand, 29348158 - 29348226
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaata 811  Q
    ||||||||||||||||| ||||||||||||||| || | |||| ||||||| ||||||||||||||||||||    
T  29348158 gggttaaatatgtttttggtccctataaaattg-ggacctttt-aagttta-gtccttacttaattttaata 29348226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 740 - 813
Target Start/End: Original strand, 34995421 - 34995491
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatagg 813  Q
    ||||||||||||||||| |||||||||||||||||  |  ||| ||| ||| ||||||||||||||||||||||    
T  34995421 gggttaaatatgtttttggtccctataaaattgagacc--ttttaagatta-gtccttacttaattttaatagg 34995491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 633
Target Start/End: Complemental strand, 50615666 - 50615588
Alignment:
Q  555 gttaattaggttttacgtcctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcc 633  Q
    |||||||| |||||| ||| |||||||||||||||||| ||||||||||| ||  || ||  ||||||||||||| |||    
T  50615666 gttaattatgttttaggtcttataaataggcgcgtttctaacattagtccttacttacattctattaaatttttggtcc 50615588  T

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Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 38173784 - 38173853
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||| |||||||||||||  |||  | ||| ||||||| |||||||||||||||||||||    
T  38173784 gggttaaatatgtttttggtccctataaaat--aggaaactttcaagttta-gtccttacttaattttaatag 38173853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 53377686 - 53377617
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||||||||||||||||||   || | ||  ||||||| |||||||||||||||||||||    
T  53377686 gggttaaatatgtttttagtccctataaaatt--aggaacttctaagttta-gtccttacttaattttaatag 53377617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 747 - 849
Target Start/End: Complemental strand, 8576309 - 8576211
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactc 846  Q
    ||||||||||  ||||||||||||||||  | |||  |||||||| ||||||||||||||||||||  | ||||||||| || ||||| | |||||||||    
T  8576309 atatgtttttgctccctataaaattgagacctttt--aagtttag-tccttacttaattttaatagtgt-ttttagtccatataaaaaaattatgcactc 8576214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 771
Target Start/End: Complemental strand, 28769677 - 28769646
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaatt 771  Q
    ||||||||||||||||||||||||||||||||    
T  28769677 gggttaaatatgtttttagtccctataaaatt 28769646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 746 - 833
Target Start/End: Complemental strand, 41786486 - 41786404
Alignment:
Q  746 aatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaa 833  Q
    |||||||||||||||| ||||||||||||| |||||||| |||||  || |||||||||||||||| | ||||||| |||||||||||    
T  41786486 aatatgtttttagtcc-tataaaattgagg-cattttaa-gtttaa-tctttacttaattttaata-gttgttttaatccttacaaaa 41786404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 747 - 849
Target Start/End: Complemental strand, 41928244 - 41928146
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactc 846  Q
    |||||||||| ||||||||||||||| || | |||| ||||||| |||||||||||||| ||||||  | ||||||||| || ||||| | |||||||||    
T  41928244 atatgtttttggtccctataaaattg-ggacctttt-aagttta-gtccttacttaattataatagtgt-ttttagtccatataaaaaaattatgcactc 41928149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 853
Target Start/End: Original strand, 19601484 - 19601540
Alignment:
Q  796 ttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||||||||||||||| || |||||||||||| ||||| | ||||||||| ||||||    
T  19601484 ttacttaattttaatag-atattttagtccttataaaaaaattatgcactcggtatta 19601540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 740 - 769
Target Start/End: Complemental strand, 34359592 - 34359563
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaa 769  Q
    ||||||||||||||||||||||||||||||    
T  34359592 gggttaaatatgtttttagtccctataaaa 34359563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 747 - 847
Target Start/End: Original strand, 52701050 - 52701146
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactc 846  Q
    |||||||||| |||||||||||||||||  |  ||| ||||||| ||| |||||||||||||||||  | ||||||||| || ||||| | |||||||||    
T  52701050 atatgtttttggtccctataaaattgagacc--ttttaagttta-gtctttacttaattttaatagtgt-ttttagtccatataaaaaaattatgcactc 52701145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 1e-58; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 552 - 853
Target Start/End: Complemental strand, 13324148 - 13323854
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||| || |       |  |    
T  13324148 agggttaattatgttttaggtccctataaataggcgcgtttccaacattagtccctacttaaattttattaaatttttgatccccaatgtttttttccgt 13324049  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| |||||||||| | | | ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||          |||||| |||||||    
T  13324048 tag-caaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtggatgtcacatctgacttttttt---gttggg-ttaaata 13323954  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||| ||||||||||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  13323953 tgtttttagtccttataaaattgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagt 13323858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 552 - 853
Target Start/End: Complemental strand, 39338116 - 39337822
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| ||||||  ||| |||||||||||| ||||||||||||||||| ||  ||||| |||||||||||||| |||| ||||       |  |    
T  39338116 agggttaattatgttttagatccctataaataggcgtgtttccaacattagtccctacttaaattttattaaatttttggtccccaacgtttttttccgt 39338017  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| | |||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||| |||||||    
T  39338016 tag-cgaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttt---gttggg-ttaaata 39337922  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| | |||||||||| |||||||||||||||||||| |||    
T  39337921 tgtttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtcgttacaaaaatactatgcacttagt 39337826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 555 - 853
Target Start/End: Complemental strand, 24452694 - 24452405
Alignment:
Q  555 gttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccca-acgnnnnnnncaattag 652  Q
    |||||||| |||||| |||| |||||||||||| ||||||||||||||||| ||  ||||| ||||||| |||||| ||||  |||       |  ||||    
T  24452694 gttaattatgttttaagtccctataaataggcgtgtttccaacattagtccctacttaaattttattaattttttggtccccgacgtttttttccgttag 24452595  T
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
     |||||||||| | | | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||           ||  ||||||||||||    
T  24452594 -caaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacatggatgccacatctgactattt------ttttggttaaatatgt 24452502  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  24452501 ttttagtccctgtaaaattgagg-cattttaa-gtttag-tccttacttaattttaataat-tgttttagtccttacaaaaatactatgcactcagtatt 24452406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 556 - 853
Target Start/End: Complemental strand, 21136534 - 21136247
Alignment:
Q  556 ttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaattagg 653  Q
    ||||||| |||||| |||| |||||||||||| ||||||||||||||||| ||  ||||| |||||||||||||| | || ||||       |  ||||     
T  21136534 ttaattatgttttaggtccctataaataggcgtgtttccaacattagtccctacttaaattttattaaatttttggttcctaacgtttttttccgttag- 21136436  T
Q  654 caaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtt 753  Q
    |||||||||| | | | |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||           ||  |||||||||||||    
T  21136435 caaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacacggatgccacatctcactttt-------ttttggttaaatatgtt 21136343  T
Q  754 tttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  21136342 tttagtccctgtaaaattgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagtatta 21136247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 552 - 852
Target Start/End: Complemental strand, 37707320 - 37707026
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||||||||| ||||       |  |    
T  37707320 agggttaattatgttttaggtccctataaacaggcgcgtttccaacattagtccctacttaaattttattaaatttttgatccccaacgtttttttccgt 37707221  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    |||  ||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||          |||||| |||||||    
T  37707220 taga-aaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgtcacatctgacattttttt--gttggg-ttaaata 37707125  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    | |||||| |||||||||| |||||| |||||||| |||||| ||||| || |||||||||||  | |||||||||||||||||||||||||||||||||    
T  37707124 tatttttaatccctataaatttgagg-cattttaa-gtttag-tccttgctaaattttaatagt-tattttagtccttacaaaaatactatgcactcagt 37707029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 35862855 - 35863030
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||          |||||| ||||||| ||||||||||||||||||||    
T  35862855 gttaattgttgctgattgagcaaacggtgaagcacacatggatgtcacatctgactttttttt--gttggg-ttaaatacgtttttagtccctataaaat 35862951  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  35862952 tgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagtatta 35863030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 575 - 853
Target Start/End: Complemental strand, 36063996 - 36063727
Alignment:
Q  575 tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaattaggcaaaataggttcccaccgtt 673  Q
    ||||||||||| |||||||||||||||||| ||  ||||| ||||||||||||||||||| ||||       |  |||| |||||||||| | ||  |||    
T  36063996 tataaataggcccgtttccaacattagtcc-tacttaaattttattaaatttttgatccccaacgtttttttctgttag-caaaataggtcctcattgtt 36063899  T
Q  674 aattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattga 773  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||||||          |||| | |||||||||||||||||||||||||||||||    
T  36063898 aattgttgctgattgat-aaacggtgaagcacacgtggatgtcacatctgactttttttt--gttgag-ttaaatatgtttttagtccctataaaattga 36063803  T
Q  774 gggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    || |||||||| |||||| ||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  36063802 gg-cattttaa-gtttag-tccttacttaattttaatagc-tgtttttgtccttacaaaaatactatgcactcagtatta 36063727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 24451176 - 24451473
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    |||||||||||  ||||| |||| |||||||||||| ||||||||||||||||| ||  ||||| ||||||||||||||||||| ||||       |  |    
T  24451176 agggttaattatattttaggtccctataaataggcgtgtttccaacattagtccctacttaaattttattaaatttttgatccccaacgttttttcc--t 24451273  T
Q  650 taggcaaaataggttcccaccgttaattgttg---ctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaa 746  Q
    |  |||||||||||   ||| |||||||||||   |||||||||||||||||||||||||||||||||| |||||||||          |||||| ||||    
T  24451274 ttagcaaaataggtcttcactgttaattgttgttactgattgagcaaacggtgaagcacacgtggatgcaacatctgactttttttt--gttggg-ttaa 24451370  T
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactc 846  Q
    ||||||||||||||||||||||||||| | |||||| ||||||| |||||||||||||||||||| | | ||||||| |||||||||||||||||||||     
T  24451371 atatgtttttagtccctataaaattga-gacatttt-aagttta-gtccttacttaattttaata-gtttttttagttcttacaaaaatactatgcactt 24451466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 37705832 - 37706126
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| ||||||||||||||||| |||||||||||| ||  ||||| |||||||||||||| |||| ||||               
T  37705832 agggttaattatgttttaggtccctataaataggcgcgttttcaacattagtccctacttaaattttattaaatttttggtccccaacgtttttttttcg 37705931  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    |  ||||||||||| | | | ||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||           ||  |||||||||    
T  37705932 ttagcaaaataggtcctcgctgttaattgttgttgattgagcaaacagtgaagcacacatggatgccacatctgactttttt-----ttttggttaaata 37706026  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||| | ||||||||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  37706027 tgtttttagtccttgtaaaattgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacagaaatactatgcactcagt 37706122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 552 - 854
Target Start/End: Complemental strand, 35370285 - 35369992
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaatt 650  Q
    ||||||||||| |||||| |||| |||||||||||| |||| |||||||||| | ||  ||||| |||||||||||||| ||||||||       |  ||    
T  35370285 agggttaattatgttttaggtccctataaataggcgtgttttcaacattagttcctacataaat-ttattaaatttttggtcccaacgtttttttccgtt 35370187  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||||||| |   |||||||||||||||||||||||| ||||||||||||||||||||||||||||||          ||| |||||||||||    
T  35370186 ag-caaaataggttctcgttgttaattgttgctgattgagcaaaaggtgaagcacacgtggatgccacatctgac---tttttttgtt-gggttaaatat 35370092  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    |||||||||||||||||||| ||   |||||| ||||||| ||| |||||||||||||||| | |||||||||||| |||||||||||||||| | ||||    
T  35370091 gtttttagtccctataaaatcga-aacatttt-aagttta-gtctttacttaattttaata-gttgttttagtcctcacaaaaatactatgcatttagta 35369996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 653 - 853
Target Start/End: Complemental strand, 41281797 - 41281602
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    ||||||||||||| | | ||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||          |||||| ||||||||||    
T  41281797 gcaaaataggttctcgctgttaaatgttgttgattgagcaaacggtgaagcacacgtggatgccacatctaacttttttttttgttggg-ttaaatatgt 41281699  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||   |||||||||||||||||||||| |||||||||| ||||    
T  41281698 ttttagtccctataaaattga-ggcatttt-aagttta-atccttacttaattttaata-attgttttagtccttacaaaaatattatgcactcaatatt 41281603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 553 - 853
Target Start/End: Original strand, 16472689 - 16472981
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaatta 651  Q
    ||||||||||  ||||| |||| |||||||||||||||||||||||||||||| ||  ||||| ||||||||||||||| ||| |         |  |||    
T  16472689 gggttaattatattttaggtccctataaataggcgcgtttccaacattagtccctacttaaattttattaaatttttgacccccaatgttttttccgtta 16472788  T
Q  652 ggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatg 751  Q
    | |||||||||||    | |||||||||| |||||||||||||||||||||||||||||||||||||||| |||            | ||||||||||||    
T  16472789 g-caaaataggtttttgctgttaattgttactgattgagcaaacggtgaagcacacgtggatgccacatcggactttttttta---ttgggttaaatatg 16472884  T
Q  752 tttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtat 851  Q
    ||||||||||||||||| |||||| | |||||| |||||| ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||| ||    
T  16472885 tttttagtccctataaa-ttgagg-cgttttaa-gtttag-tccttacttaattttaatagt-tgttttagtcgttacaaaaatactatgcactcagaat 16472979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 553 - 853
Target Start/End: Original strand, 16477260 - 16477552
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaatta 651  Q
    ||||||||||  ||||| |||| |||||||||||||||||||||||||||||| ||  ||||| ||||||||||||||| ||| |         |  |||    
T  16477260 gggttaattatattttaggtccctataaataggcgcgtttccaacattagtccctacttaaattttattaaatttttgacccccaatgttttttccgtta 16477359  T
Q  652 ggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatg 751  Q
    | |||||||||||    | |||||||||| |||||||||||||||||||||||||||||||||||||||| |||            | ||||||||||||    
T  16477360 g-caaaataggtttttgctgttaattgttactgattgagcaaacggtgaagcacacgtggatgccacatcggactttttttta---ttgggttaaatatg 16477455  T
Q  752 tttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtat 851  Q
    ||||||||||||||||| |||||| | |||||| |||||| ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||| ||    
T  16477456 tttttagtccctataaa-ttgagg-cgttttaa-gtttag-tccttacttaattttaatagt-tgttttagtcgttacaaaaatactatgcactcagaat 16477550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 21135018 - 21135312
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaa-cgnnnnnnncaat 649  Q
    ||||||||||| |||||  |||| |||||||||||| |||| ||||||||||||  |  ||||| ||||||||||||||||||| | ||       |  |    
T  21135018 agggttaattatgtttttggtccctataaataggcgtgttttcaacattagtcccaacttaaattttattaaatttttgatccccatcgtttttttccgt 21135117  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| |||||||||| | | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||          |||||| |||||||    
T  21135118 tag-caaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcatacgtggatgccacatctgactttttttt--gttggg-ttaaata 21135213  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||||||||||||| | |||||| ||||||| |||||||||||||||| |||   |||||||||||||||||||||| ||||||| ||||    
T  21135214 tgtttttagtccctataaaattga-gacatttt-aagttta-gtccttacttaattttcata-attgttttagtccttacaaaaatattatgcac-cagt 21135308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 36062499 - 36062795
Alignment:
Q  552 agggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc--aacgnnnnnnncaa 648  Q
    ||||||||||| |||||| ||||| |||||||||||||||| |||||||||||  ||| ||||| |||||||||||||| ||||  ||||         |    
T  36062499 agggttaattatgttttaggtccttataaataggcgcgttttcaacattagtctctatttaaattttattaaatttttggtcccccaacgttttttttca 36062598  T
Q  649 ttaggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaat 748  Q
    |||| ||||||||||   | | ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||           ||  ||||||||    
T  36062599 ttag-caaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaagcacacatggatgccacatttgactctttt-----ttttggttaaat 36062692  T
Q  749 --atgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactc 846  Q
      ||||||||||||| | ||||||||||| |||||||| |||||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||     
T  36062693 gtatgtttttagtccatgtaaaattgagg-cattttaa-gtttag-tccttactaaattttaatagt-tgttttagtccttacaaaaatactatgcacta 36062788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 13322882 - 13323174
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||||||||  ||||||||||||||||| ||  ||||| |||||||||||||| |||| ||||       |  |    
T  13322882 agggttaattatgttttaggtccctataaataggcatgtttccaacattagtccctacttaaattttattaaatttttggtccccaacgtttttttccgt 13322981  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| | ||||||||   ||| ||||||||||| ||||||||||||||||||| ||||| |||||| ||||||||||           ||  |||||||||    
T  13322982 tag-cgaaataggtcttcactgttaattgttgttgattgagcaaacggtgaaacacacatggatgtcacatctgacttttt------ttttggttaaata 13323074  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||| ||||||||| | |||||| ||||||| |||||||||||||||||||| | |||||||||||| |||||||| ||||||||| |||    
T  13323075 tgtttttagtccctgtaaaattga-gacatttt-aagttta-gtccttacttaattttaata-gttgttttagtcctaacaaaaattctatgcacttagt 13323170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 671 - 850
Target Start/End: Original strand, 35369006 - 35369176
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||          |||| |  || ||||||||||||||||||||||||    
T  35369006 gttaattgttgctgattgagcaaacagtgaagcacacgtggatgccatgtctgacttttttt---gttgag--tatatatgtttttagtccctataaaat 35369100  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||| | |||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  35369101 tgatg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagta 35369176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 672 - 851
Target Start/End: Complemental strand, 35864136 - 35863968
Alignment:
Q  672 ttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaatt 771  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||||||||||            ||  ||||||||||||||||||||| | |||||||    
T  35864136 ttaattattgctgattgagcaaacggtgaagcacacatagatgccacatctgattttt-------ttttggttaaatatgtttttagtccatgtaaaatt 35864044  T
Q  772 gagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtat 851  Q
    |||| ||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  35864043 gagg-cattttaaa-tttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagtat 35863968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 552 - 725
Target Start/End: Original strand, 21575506 - 21575679
Alignment:
Q  552 agggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaatt 650  Q
    ||||||||||| |||||| ||||| |||||||| |||||||||||||||||| | ||  ||||| ||||||||||||||||||| |         |  ||    
T  21575506 agggttaattatgttttaggtccttataaatagacgcgtttccaacattagttcctacttaaattttattaaatttttgatccccaacattttttccgtt 21575605  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgac 725  Q
    || |||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21575606 ag-caaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgac 21575679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 740 - 853
Target Start/End: Original strand, 39336873 - 39336982
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||   |||||||||||||| ||||||||||    
T  39336873 gggttaaatatgtttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-attgttttagtccttagaaaaatacta 39336968  T
Q  840 tgcactcagtatta 853  Q
    |||| ||| |||||    
T  39336969 tgcattcaatatta 39336982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 682 - 853
Target Start/End: Original strand, 1737385 - 1737548
Alignment:
Q  682 ctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattgagggcattt 781  Q
    |||||||||||||| ||||||||||||||||||| |||||||||          |||||| ||||||||||||||||| ||||| ||||||||  |||||    
T  1737385 ctgattgagcaaacagtgaagcacacgtggatgctacatctgacttttttt---gttggg-ttaaatatgtttttagttcctatcaaattgaga-cattt 1737479  T
Q  782 taaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||| || |||||||||||||||||  ||||||||| ||||||||||||||||||||| |||||||    
T  1737480 taa-gtttag-tctttacttaattttaatagt-tgttttagttcttacaaaaatactatgcactaagtatta 1737548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 552 - 845
Target Start/End: Original strand, 41280183 - 41280469
Alignment:
Q  552 agggttaattaggttttacgt-cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatc-ccaacgnnnnnnncaat 649  Q
    ||||||||||| ||||||  | ||||||||||||||||||||||||||||||   ||  ||||| |||||||||||||| || ||||||       |  |    
T  41280183 agggttaattatgttttagattcctataaataggcgcgtttccaacattagtatttacttaaattttattaaatttttggtctccaacgtttttttccgt 41280282  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| ||||||||||   | | ||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||           ||  |||||||||    
T  41280283 tag-caaaataggtcatcgctgttaattattgctgattgagcaaacggtggagcacacatagatgccacatctgacttttttt----ttttggttaaata 41280377  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcact 845  Q
     | ||||||||||  ||||||||| |||||||| ||| ||| ||||||| |||||||||||| | ||||||||||| |||||||||| ||||||||    
T  41280378 cggttttagtcccggtaaaattga-ggcatttt-aagctta-gtccttagttaattttaata-gttgttttagtccgtacaaaaatagtatgcact 41280469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 740 - 853
Target Start/End: Original strand, 17842345 - 17842454
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    ||||||||||| |||||||||||||||||||||||  |  || |||||||| |||||||| ||||||||||| | | ||||||||  |||||||| | ||    
T  17842345 gggttaaatatatttttagtccctataaaattgagacc--ttcaaagttta-gtccttacataattttaata-gttcttttagtctctacaaaaaaatta 17842440  T
Q  840 tgcactcagtatta 853  Q
    ||||||||||||||    
T  17842441 tgcactcagtatta 17842454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 742 - 834
Target Start/End: Complemental strand, 17842881 - 17842793
Alignment:
Q  742 gttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||||||| ||||||||||||||||   | |||  |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  17842881 gttaaatatgtttttggtccctataaaattgaaaactttt--aagtttag-tccttacttaattttaatagtat-ttttagtccttacaaaaa 17842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 740 - 834
Target Start/End: Original strand, 41590213 - 41590303
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||| ||||||||| ||||||||||||||||  | | ||| ||||||| |||||||||||||||||||||| | ||||||||| ||||||||    
T  41590213 gggttaattatgtttttggtccctataaaattga--gaacttttaagttta-gtccttacttaattttaatagg-ttttttagtccctacaaaaa 41590303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 740 - 853
Target Start/End: Original strand, 37967415 - 37967524
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    ||||||||||||||||| |||||||||||||||||  |  ||| ||||||| ||| |||||||||||||||| | | ||||||||||||  |||| | ||    
T  37967415 gggttaaatatgtttttcgtccctataaaattgagatc--ttttaagttta-gtctttacttaattttaata-gtttttttagtccttaataaaaaatta 37967510  T
Q  840 tgcactcagtatta 853  Q
    |||| |||||||||    
T  37967511 tgcattcagtatta 37967524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 552 - 629
Target Start/End: Original strand, 39336712 - 39336790
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttg 629  Q
    ||||||||||| |||||| |||| ||||||||||||| ||||||||||||| || ||  ||||| ||||||||||||||    
T  39336712 agggttaattatgttttaggtccctataaataggcgcatttccaacattagaccctacttaaattttattaaatttttg 39336790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 740 - 813
Target Start/End: Complemental strand, 43988565 - 43988495
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatagg 813  Q
    ||||||||||||||||| |||||||||||||||||| |  ||  ||||||| ||||||||||||||||||||||    
T  43988565 gggttaaatatgtttttggtccctataaaattgaggtc--ttctaagttta-gtccttacttaattttaatagg 43988495  T

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Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 815 - 852
Target Start/End: Complemental strand, 16478515 - 16478478
Alignment:
Q  815 tgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16478515 tgttttagtccttacaaaaatactatgcactcagtatt 16478478  T

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Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 41590749 - 41590680
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||||||||||||| |||||||||||| || | |||| ||||||| |||||||||||||||||||||    
T  41590749 gggttaaatatgtttttagttcctataaaattg-ggacctttt-aagttta-gtccttacttaattttaatag 41590680  T

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Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 740 - 834
Target Start/End: Complemental strand, 8784996 - 8784906
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||||||||| |||||| |||||||   || ||||  ||||||| |||||||||||||||||||||| | ||||||||| ||||||||    
T  8784996 gggttaaatatgtttttggtccctctaaaatt--aggaatttctaagttta-gtccttacttaattttaatagg-ttttttagtccctacaaaaa 8784906  T

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Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 40578165 - 40578224
Alignment:
Q  58 acctggaaaatctttcaatgaccgacgaactttccgagcacagccttcacaatgcatgaa 117  Q
    |||||||||| |||| | ||| ||||||||||| |||||||| |||||||||||||||||    
T  40578165 acctggaaaacctttgagtgaacgacgaactttacgagcacaaccttcacaatgcatgaa 40578224  T

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Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 833
Target Start/End: Complemental strand, 6590680 - 6590595
Alignment:
Q  744 taaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaa 833  Q
    ||||||| ||||| |||||||||||||||  || | ||  |||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  6590680 taaatatattttttgtccctataaaattg--ggaacttctaagtttag-tccttacttaattttaatagg-ttttttagtccttacaaaa 6590595  T

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Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 575 - 725
Target Start/End: Complemental strand, 16478677 - 16478528
Alignment:
Q  575 tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatc-ccaacgnnnnnnncaattaggcaaaataggttcccaccgtt 673  Q
    |||||||||||||||||| ||||||||||| ||  ||||| |||||||||| ||| || ||||||       |  |||| |||||||||| | | | |||    
T  16478677 tataaataggcgcgtttctaacattagtccctacttaaattttattaaattattggtctccaacgtttttttcg-ttag-caaaataggtcctcgctgtt 16478580  T
Q  674 aattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgac 725  Q
    ||| |||| ||||| ||||||||||||||||||| |||||| ||||| ||||    
T  16478579 aatggttgttgattaagcaaacggtgaagcacacatggatgacacatatgac 16478528  T

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Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 740 - 813
Target Start/End: Complemental strand, 36126676 - 36126606
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatagg 813  Q
    ||||||||||||| ||| ||||||||||||||||  | | ||| ||||||| ||||||||||||||||||||||    
T  36126676 gggttaaatatgtgtttggtccctataaaattga--gaacttttaagttta-gtccttacttaattttaatagg 36126606  T

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Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 6590146 - 6590215
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||| ||||||||||||||| |  | |||  |||||||| ||||||||||||||||||||    
T  6590146 gggttaaatatgtttttggtccctataaaattgggatctttt--aagtttag-tccttacttaattttaatag 6590215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 628
Target Start/End: Original strand, 35368885 - 35368962
Alignment:
Q  552 agggttaattaggttttacgt-cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaattttt 628  Q
    ||||||||||| |||||| || |||||||||||||| |||| |||||||||| | ||  ||||| |||||||||||||    
T  35368885 agggttaattatgttttaggttcctataaataggcgtgttttcaacattagtacctacttaaattttattaaattttt 35368962  T

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Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 10409478 - 10409547
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||| |||||| |||||||| || | |||| ||||||| |||||||||||||||||||||    
T  10409478 gggttaaatatgtttttggtccctgtaaaattg-ggacctttt-aagttta-gtccttacttaattttaatag 10409547  T

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Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 747 - 847
Target Start/End: Original strand, 44893744 - 44893840
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactc 846  Q
    |||||||||| ||||||||||||||| || | ||||||| |||| |||||||||||||||||||||  | ||||||||| || ||||| | |||||||||    
T  44893744 atatgtttttggtccctataaaattg-ggaccttttaaa-ttta-gtccttacttaattttaatagtgt-ttttagtccatataaaaaaattatgcactc 44893839  T

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Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 634
Target Start/End: Original strand, 1692584 - 1692667
Alignment:
Q  552 agggttaattaggttttacgtc-ctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||||||| || ||| ||| ||||||||||||| |||| ||||| |||||| ||  ||||| |||||||||||||| ||||    
T  1692584 agggttaattatgtattaggtctctataaataggcgtgttttcaacagtagtccctacttaaattttattaaatttttggtccc 1692667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 771
Target Start/End: Complemental strand, 12667054 - 12667023
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaatt 771  Q
    ||||||||||||||||||||||||||||||||    
T  12667054 gggttaaatatgtttttagtccctataaaatt 12667023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 810
Target Start/End: Complemental strand, 14122157 - 14122090
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaat 810  Q
    ||||||||||||||||| |||||||||||||  ||||   ||| ||||||| |||||||||||||||||||    
T  14122157 gggttaaatatgtttttggtccctataaaat--aggggtctttcaagttta-gtccttacttaattttaat 14122090  T

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Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 634
Target Start/End: Original strand, 42816014 - 42816097
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||||||| |||| | |||| |||||||| ||| | ||||||||||||||| ||  ||||| |||||||||||||| ||||    
T  42816014 agggttaattatgtttaaggtccctataaatacgcgtgcttccaacattagtccctacttaaattttattaaatttttggtccc 42816097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 747 - 812
Target Start/End: Complemental strand, 30133933 - 30133871
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||| ||||||||||||||||  |  |||| ||||||| |||||||||||||||||||||    
T  30133933 atatgtttttggtccctataaaattga--gattttttaagttta-gtccttacttaattttaatag 30133871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 810
Target Start/End: Complemental strand, 5696320 - 5696257
Alignment:
Q  743 ttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaat 810  Q
    ||||||||||||||  ||||||||||||||||   ||||| ||||||| |||||||||||||| ||||    
T  5696320 ttaaatatgtttttgatccctataaaattgag---atttttaagttta-gtccttacttaattataat 5696257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 740 - 773
Target Start/End: Original strand, 9252525 - 9252558
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattga 773  Q
    ||||||||||| ||||||||||||||||||||||    
T  9252525 gggttaaatatttttttagtccctataaaattga 9252558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 604
Target Start/End: Complemental strand, 14840556 - 14840503
Alignment:
Q  552 agggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtcc 604  Q
    ||||||||||| |||| | ||||| | |||||||||||||||||||||||||||    
T  14840556 agggttaattatgtttaaggtccttacaaataggcgcgtttccaacattagtcc 14840503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 36471236 - 36471167
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||||| |||| ||||||||||||| |||  |  ||| ||||||| |||||||||||||||||||||    
T  36471236 gggttaaatatgattttggtccctataaaatagagatc--tttcaagttta-gtccttacttaattttaatag 36471167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 604
Target Start/End: Complemental strand, 42817304 - 42817251
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtcc 604  Q
    ||||||||||| |||| | |||| |||||||||||| |||||||||||||||||    
T  42817304 agggttaattatgtttaaggtccctataaataggcgtgtttccaacattagtcc 42817251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 745 - 774
Target Start/End: Original strand, 44802362 - 44802391
Alignment:
Q  745 aaatatgtttttagtccctataaaattgag 774  Q
    ||||||||||||||||||||||||||||||    
T  44802362 aaatatgtttttagtccctataaaattgag 44802391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 6e-58; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 552 - 853
Target Start/End: Complemental strand, 36249456 - 36249163
Alignment:
Q  552 agggttaattaggttttacgt-cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaatt 650  Q
    ||||||||||| |||||| || ||||||||||||||||||| |||||||||||| ||  ||||| |||||||||||| |  || ||||       |  ||    
T  36249456 agggttaattatgttttaagttcctataaataggcgcgttttcaacattagtccctacttaaattttattaaattttggtcccaaacgtttttttccgtt 36249357  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||    
T  36249356 ag-caaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttt---gttggg-ttaaatat 36249262  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  36249261 gtttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttgtagtccttacaaaaatactatgcactcagta 36249166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 37985907 - 37986200
Alignment:
Q  552 agggttaattaggttttacgtcctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatc-ccaacgnnnnnnncaatt 650  Q
    ||||||||||| ||||||  || ||||||||| || |||| |||||||||||| ||| ||||| ||||||||||||||||| ||||||       | |||    
T  37985907 agggttaattatgttttagatcttataaatagacgtgtttgcaacattagtccctatttaaattttattaaatttttgatctccaacgtttttttccatt 37986006  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    ||  ||| ||||| | | | |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||          |||||| ||||||||    
T  37986007 agtgaaa-taggtcctcgctgttaattgttactgattgagcaaacggtgaagcacacgtggatgtcacatctgactgttttt---gttggg-ttaaatat 37986101  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||    
T  37986102 gttttcagtccctataaaattgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcatta 37986197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 12367520 - 12367694
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||    
T  12367520 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttt---gttggg-ttaaatatgtttttagtccctataaaat 12367615  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||    
T  12367616 tga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatactatgcactcaggatta 12367694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 30981448 - 30981739
Alignment:
Q  552 agggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaatt 650  Q
    ||||||||||| |||||| ||||  ||| ||||||||||||||||||||||||| ||  ||||| |||||||||||||| ||||||||       |  ||    
T  30981448 agggttaattatgttttaggtcccgatatataggcgcgtttccaacattagtccctacttaaattttattaaatttttggtcccaacgtttttttccgtt 30981547  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||||| | | | ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||           ||  ||||||||||    
T  30981548 ag-caaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacatgaatgccacatctgacttttt------ttttggttaaatat 30981640  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||||| ||||||||| |||||||| ||||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||  ||||    
T  30981641 gtttttagtccctgtaaaattga-ggcatttt-aagttta-gtccttacttaattttaata-attgttttagtccttacaaaaatactatgcacgtagta 30981736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 553 - 853
Target Start/End: Complemental strand, 33709542 - 33709249
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| |||||||||||| ||||| || |||||||| ||  ||||| ||||||||||||||||||| ||||       |  ||    
T  33709542 gggttaattatgttttaggtccctataaataggcgtgtttctaatattagtccctacttaaattttattaaatttttgatccccaacgtttttttccgtt 33709443  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||||| | | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||    
T  33709442 ag-caaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttt---gttggg-ttaaatat 33709348  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    |||||||  | |||||||||||||| |||||||| |||||| |||||||||||||||||||   |||||||||||||||||||||||||||||||| |||    
T  33709347 gtttttaaccgctataaaattgagg-cattttaa-gtttag-tccttacttaattttaataat-tgttttagtccttacaaaaatactatgcactcggta 33709252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 554 - 853
Target Start/End: Complemental strand, 36368489 - 36368194
Alignment:
Q  554 ggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaa--t 649  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||| ||||||| ||  ||||| ||||||||||||||||||| |||             |    
T  36368489 ggttaattatgttttaggtccttataaataggcgcgtttccaaccttagtccctacttaaattttattaaatttttgatccccaacattttttttttcgt 36368390  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| |||||||| | | | | ||||||||||||||||||| |||||||||||||| || |||||||||||||||||          |||||| |||||||    
T  36368389 tag-caaaatagatcctcgctgttaattgttgctgattgatcaaacggtgaagcatacatggatgccacatctgactttttttt--gttggg-ttaaata 36368294  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  36368293 tgtttttagtccctataaaattgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagt 36368198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 553 - 853
Target Start/End: Original strand, 33708018 - 33708310
Alignment:
Q  553 gggttaattaggttttacgt-cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnn-caat 649  Q
    |||||||||| |||||| || ||||||||||||| |||||||||||||||||||||  ||||| |||||||||||||| |||| ||||        |  |    
T  33708018 gggttaattatgttttaggttcctataaataggcacgtttccaacattagtccatacttaaattttattaaatttttggtccccaacgttttttttccgt 33708117  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| |||||||||| | | | ||||||||||||||||||||||||||||||||||||| | |||||||||||||||           ||   ||||||||    
T  33708118 tag-caaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacatagatgccacatctgacttttt------tttttgttaaata 33708210  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||| ||||||||||| |||||||| |||||  ||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||    
T  33708211 tgtttttagtccctgtaaaattgagg-cattttaa-gtttaa-tccttacttaattttaatagt-tgttttagtctttacaaaaatactatacactcagt 33708306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 11999534 - 11999708
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||          |||| | ||||||||||||||||||||||||||||    
T  11999534 gttaattgttgttgattgagcaaacggtgaagcacatgtggatgccacatctgactttttct---gttgcg-ttaaatatgtttttagtccctataaaat 11999629  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  11999630 tgagg-cattttaa-gtttag-tccttacgtaattttaatagt-tgttttagtccttacaaaaatactatgcactaagtatta 11999708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 553 - 843
Target Start/End: Complemental strand, 37987290 - 37987008
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccca-acgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||||||||| ||  ||||| |||||||||||||| ||||  |||          ||    
T  37987290 gggttaattatgttttaggtccctataaataggcgcgtttccaacattagtccctacttaaattttattaaatttttggtccccgacgttttttttcgtt 37987191  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||||| | | | ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||          ||| || ||||||||    
T  37987190 ag-caaaataggtcctcgctgttaattgttgctgattgagcaaacag--aagcacacgtggatgctacatctgactttttttt--gttagg-ttaaatat 37987097  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgca 843  Q
    ||||||||||||| ||||||||| |||||||| ||||||| || ||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  37987096 gtttttagtccctgtaaaattga-ggcatttt-aagttta-gttcttacttaattttaata-gttgttttagtccttgcaaaaatactatgca 37987008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 36362296 - 36362468
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||| ||||||||||||||||||||||||||||| | |||||||||| ||||           ||  ||||||||||||||||||||||  ||||||    
T  36362296 gttaattattgctgattgagcaaacggtgaagcacacatagatgccacatttgacttttt------ttttggttaaatatgtttttagtccccgtaaaat 36362389  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||| |||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  36362390 tgagg-cattttaa-gtttag-tccttacttaattttagtagt-tgttttagtccttacaaaaatactatgcactcagtatta 36362468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 15054670 - 15054496
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||| || |||||||||    
T  15054670 gttaattgttgctgactcagcaaacggtgaagcacacgtggatgccacatctgacttttttt---gttggg-ttaaatatgtttttaatctctataaaat 15054575  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||| |||||| ||||||||||||   |||| |||| |||||||||||||||||||||||||||||    
T  15054574 tgagg-cattttaa-gtttag-tccttatttaattttaataat-tgttctagttcttacaaaaatactatgcactcagtatta 15054496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 46595971 - 46596144
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||           ||   |||||||||||||||||||||| ||||||    
T  46595971 gttaattgttgttgattgagcaaacggtgaagcacacatggatgtcacgtctgactttttt-----tttttgttaaatatgtttttagtccctgtaaaat 46596065  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||| |||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||    
T  46596066 tgagg-cattttaa-gtttag-tccttacttaattttaataat-tgttttagttcttacaaaaatactatgcactcagtatta 46596144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 553 - 853
Target Start/End: Complemental strand, 29232241 - 29231948
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgat-cccaacgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| ||||||||||||  |||||||||||| ||| ||  ||||| |||||||||||||| | |||||||       |  ||    
T  29232241 gggttaattatgttttaggtccctataaataggcgtatttccaacattaatccctacttaaattttattaaatttttggttcccaacggttttttccgtt 29232142  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || | |||||||| | | | ||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||          ||| || ||||||||    
T  29232141 ag-cgaaataggtcctcgctgttaattgttgctaattgagcaaacagtgaagcaca-gtggatgccacatctgactttttttt--gttagg-ttaaatat 29232047  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
     |||||||||||| ||||||||||  |||||||| ||||||  ||||||||||||||||| |  |||||||||||||||||||||| |||||||||||||    
T  29232046 atttttagtccctgtaaaattgaga-cattttaa-gtttagc-ccttacttaattttaattgt-tgttttagtccttacaaaaatattatgcactcagta 29231951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 740 - 853
Target Start/End: Complemental strand, 12368643 - 12368534
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  12368643 gggttaaatatgtttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatacta 12368548  T
Q  840 tgcactcagtatta 853  Q
    | || ||| |||||    
T  12368547 tacattcaatatta 12368534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 553 - 853
Target Start/End: Original strand, 36248032 - 36248324
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccca-acgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| ||||||||| |||||||||||||||||||| ||  ||||| |||||||||||||| ||||  |||       |  ||    
T  36248032 gggttaattatgttttaggtccctataaatagacgcgtttccaacattagtccctacttaaattttattaaatttttggtccccgacgtttttttccgtt 36248131  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||| | | | | ||||||||||| |||||||||||||||  || |||||||||||||||||||||            |||||| ||||||||    
T  36248132 ag-caaaatagatcctcgctgttaattgttgttgattgagcaaacgg--aatcacacgtggatgccacatctgt-acttttttttgttggg-ttaaatat 36248226  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||| ||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| | |||||| || ||||||||||||||||||| ||| ||    
T  36248227 gtttt-agtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttggttcttacaaaaatactatgcattcaata 36248321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 554 - 853
Target Start/End: Complemental strand, 534208 - 533914
Alignment:
Q  554 ggttaattaggttttacgtc-ctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaatta 651  Q
    ||||||||| |||||| ||| | ||||||||||| |||| |||||||||| | ||| ||||| ||||||||||||||||||| ||||       |  |||    
T  534208 ggttaattatgttttaggtctcaataaataggcgtgttttcaacattagttcctatttaaattttattaaatttttgatcccgaacgtttttttcg-tta 534110  T
Q  652 ggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatg 751  Q
    | ||||||| || | | | ||||||| |||||||| |||||||||||||| |||||||||||||||||||||||          ||| ||||||||||||    
T  534109 g-caaaataagtcctcgctgttaatttttgctgatggagcaaacggtgaaacacacgtggatgccacatctgac--ttttttttgtt-gggttaaatatg 534014  T
Q  752 tttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatact---atgcactcag 848  Q
    |||||| | | ||||||||||| |||||||| |||||||   |||||||||||||||||| | | ||||||||||||||||||||||   ||||||||||    
T  534013 tttttaat-catataaaattga-ggcatttt-aagttta-acccttacttaattttaata-gttattttagtccttacaaaaatactatgatgcactcag 533919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 671 - 812
Target Start/End: Complemental strand, 30982835 - 30982700
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||          ||| ||||||||||  |||||||||||||||||||    
T  30982835 gttaattgttgctaattgagcaaacggtgaagcacacgtggatgccatatctgac--ttttttttgtt-gggttaaataaatttttagtccctataaaat 30982739  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||| |||||||| ||||||| |||||||||||||||||||||    
T  30982738 tga-ggcatttt-aagttta-gtccttacttaattttaatag 30982700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 741 - 853
Target Start/End: Original strand, 29231208 - 29231316
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactat 840  Q
    ||||||||||||||||||||||||||||||||| | |||||| ||||||| |||||||||||||||||||| | |||||||||||||| ||||||| |||    
T  29231208 ggttaaatatgtttttagtccctataaaattga-gacatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttataaaaatattat 29231303  T
Q  841 gcactcagtatta 853  Q
    ||| ||| |||||    
T  29231304 gcattcaatatta 29231316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 553 - 833
Target Start/End: Original strand, 15053345 - 15053617
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccca-acgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| ||||||||||||||||| |||||||||||| ||  ||||| ||||||||| |||| ||||  |||       |  ||    
T  15053345 gggttaattatgttttaggtccctataaataggcgcgttttcaacattagtccctacttaaattttattaaatatttggtccccgacgtttttttccgtt 15053444  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||| | | | | |||||||||| |||||||||||||| |  ||||||| ||||||||||||||||||          |||||| ||||||||    
T  15053445 ag-caaaatagctcctcgctgttaattgttactgattgagcaaacag--aagcacatgtggatgccacatctgactttttttt--gttggg-ttaaatat 15053538  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaa 833  Q
    ||||||||||||||||||||||| ||||||||  |||||| || ||||||||||||||||| | |||||| ||||||||||||    
T  15053539 gtttttagtccctataaaattga-ggcatttt-cagttta-gttcttacttaattttaata-gttgtttttgtccttacaaaa 15053617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 554 - 634
Target Start/End: Complemental strand, 12368806 - 12368725
Alignment:
Q  554 ggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||||||||| ||  ||||| |||||||||||||| ||||    
T  12368806 ggttaattatgttttaggtccctataaataggcgcgtttccaacattagtccctacttaaattttattaaatttttggtccc 12368725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 792 - 853
Target Start/End: Complemental strand, 46597139 - 46597079
Alignment:
Q  792 gtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||    
T  46597139 gtccttacttaattttaatagt-tgttttagtccttacaaaaatactatccattcagtatta 46597079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 46517487 - 46517418
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||| ||||||||||||||| || |||||| ||||||| |||||||||||||||||||||    
T  46517487 gggttaaatatgtttttcgtccctataaaattg-ggacatttt-aagttta-gtccttacttaattttaatag 46517418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 740 - 834
Target Start/End: Complemental strand, 21794753 - 21794663
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||||||||| |||||||||||||||  || | ||  |||||||| ||||||||||||||||||||| | ||| ||||||||||||||    
T  21794753 gggttaaatatgtttttggtccctataaaattg--ggaacttataagtttag-tccttacttaattttaatagg-tttttaagtccttacaaaaa 21794663  T

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Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 741 - 834
Target Start/End: Original strand, 26805367 - 26805456
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    |||||||||||||||| |||||||||||||||  || | ||  |||||||| ||||||||||||||||||||| | ||||| ||||||||||||    
T  26805367 ggttaaatatgtttttggtccctataaaattg--ggaacttctaagtttag-tccttacttaattttaatagg-ttttttaatccttacaaaaa 26805456  T

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Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 30742742 - 30742673
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||||||||||||||||||||| |  |||  |||||||  ||||||||||||||||||||    
T  30742742 gggttaaatatgtttttagtccctataaaattgagag--tttctaagttta-atccttacttaattttaatag 30742673  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 740 - 810
Target Start/End: Original strand, 48410003 - 48410070
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaat 810  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||  |||  |||||||||||||||||||    
T  48410003 gggttaaatatgtttttggtccctataaaattg-ggacattttaagtttt--gtccttacttaattttaat 48410070  T

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Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 739 - 853
Target Start/End: Original strand, 2058958 - 2059067
Alignment:
Q  739 ggggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatact 838  Q
    ||||||||||||||||||||||||||| |||||| || | |||| ||||||| ||||||| ||||||||||||| |  ||||||||| || ||||||| |    
T  2058958 ggggttaaatatgtttttagtccctatgaaattg-ggacctttt-aagttta-gtccttatttaattttaatagta-cttttagtcccta-aaaaatatt 2059052  T
Q  839 atgcactcagtatta 853  Q
     ||||||||| ||||    
T  2059053 ctgcactcagcatta 2059067  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 41332017 - 41331948
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||| |||||||| ||||||||||||||  |  ||| ||||||| |||||||||||||||||||||    
T  41332017 gggttaaatatatttttagttcctataaaattgagacc--ttttaagttta-gtccttacttaattttaatag 41331948  T

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Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 19791121 - 19791190
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||||||||||| | |||||||||||| || | |||| ||||||| |||||||||||||||||||||    
T  19791121 gggttaaatatgtttttatttcctataaaattg-ggacctttt-aagttta-gtccttacttaattttaatag 19791190  T

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Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 743 - 834
Target Start/End: Complemental strand, 35531204 - 35531117
Alignment:
Q  743 ttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    |||||||||||||| |||||||||||||||  || | ||  |||||||| ||||||||||||||||||| | | |||||||||||| |||||    
T  35531204 ttaaatatgtttttggtccctataaaattg--ggaacttctaagtttag-tccttacttaattttaataag-ttttttagtccttagaaaaa 35531117  T

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Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 740 - 811
Target Start/End: Complemental strand, 42972384 - 42972316
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaata 811  Q
    ||||||| ||||||||| ||||||||||||||||  | | ||| ||||||| ||||||||||||||||||||    
T  42972384 gggttaattatgtttttggtccctataaaattga--gaacttttaagttta-gtccttacttaattttaata 42972316  T

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Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 634
Target Start/End: Complemental strand, 12251982 - 12251899
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||||||| |||| | |||| |||||||| ||| | |||||||||| |||| ||| ||||| ||||||||||||| |||||    
T  12251982 agggttaattatgtttaaagtccctataaataagcgagcttccaacattggtccctatttaaattttattaaatttttcatccc 12251899  T

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Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 810
Target Start/End: Original strand, 13501087 - 13501154
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaat 810  Q
    ||||||||||||||||| |||||||||||||  ||||   ||| ||||||| |||||||||||||||||||    
T  13501087 gggttaaatatgtttttggtccctataaaat--aggggtctttcaagttta-gtccttacttaattttaat 13501154  T

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Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 747 - 847
Target Start/End: Complemental strand, 25352852 - 25352756
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatg-ttttagtccttacaaaaatactatgcact 845  Q
    |||||||||| ||||||||||||||| | ||  ||| ||||||| |||||||||||||||||||||  || ||||||||| || ||||| | ||||||||    
T  25352852 atatgtttttggtccctataaaattgtgagc--ttttaagttta-gtccttacttaattttaatag--tgcttttagtccatataaaaaaattatgcact 25352758  T

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Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 771
Target Start/End: Original strand, 33752868 - 33752899
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaatt 771  Q
    ||||||||||||||||||||||||||||||||    
T  33752868 gggttaaatatgtttttagtccctataaaatt 33752899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 634
Target Start/End: Original strand, 29231069 - 29231118
Alignment:
Q  585 cgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    |||||||||||||||||||| ||  ||||| |||||||||||||| ||||    
T  29231069 cgcgtttccaacattagtccttacttaaattttattaaatttttggtccc 29231118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 628
Target Start/End: Original strand, 36362176 - 36362253
Alignment:
Q  552 agggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaattttt 628  Q
    ||||||||||| |||||| || || ||||||||||  ||||||||||||| |||  || ||||| |||||||||||||    
T  36362176 agggttaattatgttttaggttcttataaataggcatgtttccaacattaatccccatttaaattttattaaattttt 36362253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 634
Target Start/End: Original strand, 51839915 - 51839976
Alignment:
Q  573 cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    |||||||||| ||| | |||||||||| |||| ||| ||||| ||||||||||||| |||||    
T  51839915 cctataaataagcgagcttccaacattggtccctatttaaattttattaaatttttcatccc 51839976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 747 - 812
Target Start/End: Original strand, 51840106 - 51840168
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||| ||||||||||||||||   |||||| ||||||| |||||||||||||||||||||    
T  51840106 atatgtttttggtccctataaaattga-aacatttt-aagttta-gtccttacttaattttaatag 51840168  T

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Target: chr5 (Bit Score: 112; Significance: 4e-56; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 553 - 854
Target Start/End: Complemental strand, 13921249 - 13920953
Alignment:
Q  553 gggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaatt 650  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||| || |       |  ||    
T  13921249 gggttaattatgttttaggtccttataaataggcgcgtttccaacattagtccctatttaaattttattaaatttttggtccccaatgtttttttccgtt 13921150  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||||| | | |  |||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||| ||||||||    
T  13921149 ag-caaaataggtcctcgctattaattgttgctgattgagcaaacggtgaagcacacatggatgccacatctgacttttttttt-gttggg-ttaaatat 13921053  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  13921052 gtttttagtccctttaaaattgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatattatgcactcagta 13920957  T

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Target: chr5; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 653 - 853
Target Start/End: Original strand, 13919861 - 13920054
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||||||| || |||||| ||||||||||          |||||| ||||||||||    
T  13919861 gcaaaataggtcctcactgttaattgttgctgattgagcaaacggtgaagcatacatggatgtcacatctgactttttttt--gttggg-ttaaatatgt 13919957  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||    
T  13919958 ttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatactatgcacccagtatt 13920053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 554 - 853
Target Start/End: Complemental strand, 38694034 - 38693740
Alignment:
Q  554 ggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgat-cccaacgnnnnnnncaatta 651  Q
    ||||||||| |||||| |||| |||||||||||| |||||||| |||| |||  |  ||||| |||||||||||||||| ||| ||        |  |||    
T  38694034 ggttaattatgttttaggtccctataaataggcgtgtttccaatattaatccccacttaaattttattaaatttttgatcccctacatttttttccgtta 38693935  T
Q  652 ggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatg 751  Q
     ||||||||||| | ||| ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||          ||| ||||||||||||    
T  38693934 -gcaaaataggtcctcactgttaattgttgttgattgagcaaacggtgaagcacatgcggatgccacatctgac-tttttttttgtt-gggttaaatatg 38693838  T
Q  752 tttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtat 851  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||    
T  38693837 tttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatactatgcactcaatat 38693742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 556 - 852
Target Start/End: Original strand, 26864933 - 26865222
Alignment:
Q  556 ttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaattagg 653  Q
    ||||||| |||||| |||| |||||||| ||||||||| ||||||||||| ||  ||||| ||||| |||||||| |||| ||||       |  ||||     
T  26864933 ttaattatgttttaggtccctataaataagcgcgtttctaacattagtccctacttaaattttattcaatttttggtccccaacgtttttttccgttag- 26865031  T
Q  654 caaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtt 753  Q
    | |||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||          |||||| |||||||||||    
T  26865032 cgaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatatgacttttttt---gttggg-ttaaatatgtt 26865127  T
Q  754 tttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    |||||||||||||||| ||||  |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||    
T  26865128 tttagtccctataaaagtgagt-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatccactcagtatt 26865222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 8218477 - 8218302
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||| | ||||||||||||||||||||||||||||    
T  8218477 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttt---gttgag-ttaaatatgtttttagtccctataaaat 8218382  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttac-aaaaatactatgcactcagtatta 853  Q
    ||| |||||||| ||||||| |||||||||||||||||||| |  |||||||||||||| ||||||||||||||||||||||||    
T  8218381 tga-ggcatttt-aagttta-gtccttacttaattttaata-gtggttttagtccttacaaaaaatactatgcactcagtatta 8218302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 578 - 853
Target Start/End: Complemental strand, 43441431 - 43441164
Alignment:
Q  578 aaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaattaggcaaaataggttcccaccgttaatt 677  Q
    ||||||||| |||| |||||||||||  ||  ||||| |||||||||||||| |||||||        |  |||| |||||||| | |  ||||||||||    
T  43441431 aaataggcgtgttttcaacattagtctctacttaaattttattaaatttttggtcccaacacttttttccgttag-caaaatagatcctgaccgttaatt 43441333  T
Q  678 gttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattgagggc 777  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||||| |||    
T  43441332 gttgctgattgagcaaaccgtaaagcacacgtggatgccacatctgaccttttttt--gttggg-ttaaatatgtttttagtccctataaaattga-ggc 43441237  T
Q  778 attttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||||||  |||  |||||| ||||||||||||| | |||||||||| ||||||||||||||||||||||||||||    
T  43441236 attttaa--ttttagtcctttcttaattttaata-gttgttttagtctttacaaaaatactatgcactcagtatta 43441164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 552 - 853
Target Start/End: Complemental strand, 34527698 - 34527409
Alignment:
Q  552 agggttaattaggttttacgtc-ctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaatt 650  Q
    ||||||||||| ||||||  || ||||||||||||| ||||||||||||| | | ||  ||||| |||||||||||||| |||||| |       |  ||    
T  34527698 agggttaattatgttttagatctctataaataggcgtgtttccaacattaattcctacttaaattttattaaatttttggtcccaatgtttttttccgtt 34527599  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || | |||||||| | | | |||||||||||||||||||||||||||||||||||||||| ||||||||||||            ||| |||||||||||    
T  34527598 ag-cgaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtgaatgccacatctg---gttttttttgtt-gggttaaatat 34527504  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    |||||||||||||    |||||| |||||||| |||||||  | ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  34527503 gtttttagtccct----aattga-ggcatttt-aagttta-ctgcttacttaattttaata-gttgttttagtccttacaaaaatactatgcactcagta 34527412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 552 - 843
Target Start/End: Complemental strand, 26866275 - 26865993
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccca-acgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||||||||| ||||||||||||||||| ||  ||||| |||||||||||||| ||||  |||       |  |    
T  26866275 agggttaattatgttttaggtccctataaataggcgtgtttccaacattagtccctacttaaattttattaaatttttgctccccgacgtttttttccgt 26866176  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| ||||||| ||   | | |||||||||||||||||||||||||||  ||||||||||||||||||||||| ||            | ||||||||||    
T  26866175 tag-caaaataagtcatcgctgttaattgttgctgattgagcaaacgg--aagcacacgtggatgccacatctaactttttttta---ttgggttaaata 26866082  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgca 843  Q
    |||||| ||||||||||||||||||| |||||||| |||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  26866081 tgtttt-agtccctataaaattgagg-cattttaa-gtttag-tccttgcttaattttaatagt-tgttttagtccttacaaaaatactatgca 26865993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 653 - 853
Target Start/End: Original strand, 34526831 - 34527021
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    ||||||||||| | | | |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||          |||||  ||||||||||    
T  34526831 gcaaaataggtcctcgctgttaattgttgctgattgagcaaacgg--aagcacacgtggatgtcacatctgacttttttct--gttgg--ttaaatatgt 34526924  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||| ||||||||||||  |||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||||    
T  34526925 ttttagtccttataaaattgagc-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcattcaatatt 34527020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 685 - 851
Target Start/End: Complemental strand, 18951117 - 18950960
Alignment:
Q  685 attgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattgagggcattttaa 784  Q
    |||||| |||||||||||||||| |||||||||||||||||           ||  ||||||||||||||||||||||| ||||||||||| ||||||||    
T  18951117 attgagaaaacggtgaagcacacatggatgccacatctgactttttt-----ttttggttaaatatgtttttagtccctgtaaaattgagg-cattttaa 18951024  T
Q  785 agtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtat 851  Q
     |||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  18951023 -gtttag-tccttacttaattttaatagt-tgttttaatccttacaaaaatactatgcactcagtat 18950960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 742 - 853
Target Start/End: Original strand, 41138909 - 41139016
Alignment:
Q  742 gttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatg 841  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||| || |||||||||||||||||  |||||||||||||||||||||||||||    
T  41138909 gttaaatatgtttttagtccctgtaaaattgagg-cattttaa-gtttag-tctttacttaattttaatagt-tgttttagtccttacaaaaatactatg 41139004  T
Q  842 cactcagtatta 853  Q
    ||||||||||||    
T  41139005 cactcagtatta 41139016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 552 - 717
Target Start/End: Complemental strand, 41140218 - 41140052
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||||||||||| ||  ||||| |||||||||||||| |||| || |       |  |    
T  41140218 agggttaattatgttttaggtccctataaataggcgcgtttccaacattagtccctacttaaattttattaaatttttggtccccaatgtttttttccgt 41140119  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgcca 717  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  41140118 tag-caaaataggttcccactgttaattgttgctgattgagcaaacagtgaaccacacatggatgcca 41140052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 676 - 853
Target Start/End: Original strand, 38691802 - 38691972
Alignment:
Q  676 ttgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattgagg 775  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||           ||  ||||||||||||||||||| ||| ||||||||||     
T  38691802 ttgttgctgattgagcaaacggtgaagcacatatggatgtcacatctgactttttttt---ttttggttaaatatgtttttagttcctgtaaaattgaga 38691898  T
Q  776 gcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
     |||||||| |||||| ||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||||||    
T  38691899 -cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttataaaaatactatgcattcagtatta 38691972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 8217214 - 8217501
Alignment:
Q  552 agggttaattaggttttacgt-cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaatt 650  Q
    ||||||||||| |||||| || |||||||||||| | |||||||||||||| ||  |  ||||| |||||||||||||| ||||||||       |  ||    
T  8217214 agggttaattatgttttaggttcctataaataggtgtgtttccaacattagccccaacataaattttattaaatttttggtcccaacgtttttttccgtt 8217313  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||||| | |   |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||          |||   |||||||||    
T  8217314 ag-caaaataggtcctcgttgttaattgttgctgattgagcaaacggtgaagcacacgtggatgtcacatcttac---tttttttgtt-cagttaaatat 8217408  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||||||| |||| || |||||||| ||||||| |||||| ||||||||||||| | |||||||||      |||||||||||||| ||||||    
T  8217409 gtttttagtccctattaaatcga-ggcatttt-aagttta-gtccttgcttaattttaata-gttgttttagt------aaaaatactatgcattcagta 8217498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 43440066 - 43440239
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||||||||||||||| |||||| || |||| ||           ||   || |||||||||||||||||||  |||||    
T  43440066 gttaattgttgctgattgagcaaacggtgaagcacacatggatgtcatatctaacttttt------tttttgtcaaatatgtttttagtccctgaaaaat 43440159  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||| ||||||||||||||||||||    ||||||||||||||| |||| |||||||||| |||||    
T  43440160 tgagg-cattttaa-gtttag-tccttacttaattttaatagttgtttttagtccttacaagaatattatgcactcactatta 43440239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 552 - 634
Target Start/End: Complemental strand, 23318133 - 23318050
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||||||| |||||| |||| |||||||||||| ||||||||||||||||| ||  ||||| |||||||||||||| ||||    
T  23318133 agggttaattatgttttaggtccctataaataggcgtgtttccaacattagtccctacttaaattttattaaatttttggtccc 23318050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 553 - 634
Target Start/End: Original strand, 41138725 - 41138807
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    |||||||||| |||||| |||| ||||||||||||||| |||||||||||||| ||  ||||| |||||||||||||| ||||    
T  41138725 gggttaattatgttttaggtccctataaataggcgcgtctccaacattagtccctacttaaattttattaaatttttggtccc 41138807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 741 - 812
Target Start/End: Original strand, 21837026 - 21837094
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||||||||||||||||||||  |  ||| ||||||| |||||||||||||||||||||    
T  21837026 ggttaaatatgtttttagtccctataaaattgagacc--ttttaagttta-gtccttacttaattttaatag 21837094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 40158147 - 40158216
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||||||||||||||||||| || | |||| ||||||| |||||||||||||||||||||    
T  40158147 gggttaaatatgtttttagtccctataaaattg-ggacctttt-aagttta-gtccttacttaattttaatag 40158216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 740 - 834
Target Start/End: Original strand, 8404269 - 8404359
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    |||||||||||||||||  |||||||||||||   || | ||| ||||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  8404269 gggttaaatatgtttttgatccctataaaatt--aggaacttttaagttta-gtccttacttaattttaatagg-ttttttagtccttacaaaaa 8404359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 740 - 853
Target Start/End: Original strand, 10463621 - 10463728
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    ||||||||||||||||| |||||||||||||  ||||  |||| ||||||| ||||||||||||||||||| || | ||||||||| || ||||| ||      
T  10463621 gggttaaatatgtttttggtccctataaaat--aggggtttttcaagttta-gtccttacttaattttaat-ggttcttttagtccctaaaaaaaaac-- 10463714  T
Q  840 tgcactcagtatta 853  Q
    ||||||||||||||    
T  10463715 tgcactcagtatta 10463728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 634
Target Start/End: Complemental strand, 18951237 - 18951158
Alignment:
Q  556 ttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||| |||||| ||||| ||||||| ||| ||||||||||||||||| ||  ||||| |||||||||||||||||||    
T  18951237 ttaattatgttttaggtccttataaataagcgtgtttccaacattagtccctacttaaattttattaaatttttgatccc 18951158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 740 - 813
Target Start/End: Complemental strand, 4463179 - 4463109
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatagg 813  Q
    |||||||||||||||||||||||||||||||||  || | ||  |||||||| |||||||||||||||||||||    
T  4463179 gggttaaatatgtttttagtccctataaaattg--ggaacttctaagtttag-tccttacttaattttaatagg 4463109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 775 - 853
Target Start/End: Complemental strand, 41140022 - 41139947
Alignment:
Q  775 ggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||||||||| |||||| ||||| ||||||||||||||  || ||||||||||| ||||||||||||||||||||||||    
T  41140022 ggcattttaa-gtttag-tccttccttaattttaatagt-tgctttagtccttataaaaatactatgcactcagtatta 41139947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 4462363 - 4462294
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||||||||||||||||||| |  |||||  ||||||| ||||||| |||||||||||||    
T  4462363 gggttaaatatgtttttagtccctataaaattgggaccattt--aagttta-gtccttaattaattttaatag 4462294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 42878022 - 42877953
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||| |||||||||||||||||  |  ||| ||||||| |||||||||||||||||||||    
T  42878022 gggttaaatatgtttttggtccctataaaattgagacc--ttttaagttta-gtccttacttaattttaatag 42877953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 740 - 834
Target Start/End: Complemental strand, 17742747 - 17742657
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||||||||| || ||||||||||||  || | ||  |||||||| || |||||||||||||||||| | ||||||||||||||||||    
T  17742747 gggttaaatatgtttttggttcctataaaattg--ggaacttctaagtttag-tctttacttaattttaataggtt-ttttagtccttacaaaaa 17742657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 740 - 853
Target Start/End: Original strand, 27307702 - 27307810
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    ||||||||||||||||| |||||||||||||  ||||   ||| ||||||| ||||||||||||||||||| || | ||||||||| || ||||| | |     
T  27307702 gggttaaatatgtttttggtccctataaaat--aggggcctttcaagttta-gtccttacttaattttaat-ggttcttttagtcccta-aaaaaaaatc 27307796  T
Q  840 tgcactcagtatta 853  Q
    ||||||||||||||    
T  27307797 tgcactcagtatta 27307810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 809
Target Start/End: Original strand, 4462456 - 4462522
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaa 809  Q
    ||||||||||||||||| ||||||||||||||| || | |||| ||||||| ||||||||||||||||||    
T  4462456 gggttaaatatgtttttggtccctataaaattg-ggacctttt-aagttta-gtccttacttaattttaa 4462522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 853
Target Start/End: Original strand, 17742216 - 17742324
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    ||||||||||||||||| ||||||||||||||| || | |||| ||||||| || ||||||||||||||||| | | ||||| |||||| ||||| | |     
T  17742216 gggttaaatatgtttttggtccctataaaattg-ggacctttt-aagttta-gttcttacttaattttaata-gtttttttattcctta-aaaaaaattc 17742310  T
Q  840 tgcactcagtatta 853  Q
    ||||||||||||||    
T  17742311 tgcactcagtatta 17742324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 744 - 812
Target Start/End: Complemental strand, 22023476 - 22023411
Alignment:
Q  744 taaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||| ||||||||||||||| || | |||| ||||||| |||||||||||||||||||||    
T  22023476 taaatatgtttttggtccctataaaattg-ggacctttt-aagttta-gtccttacttaattttaatag 22023411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 555 - 634
Target Start/End: Original strand, 23312658 - 23312738
Alignment:
Q  555 gttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    |||||||| |||||| |||| |||||||||||| ||||||||||||| | | ||  ||||| |||||||||||||| ||||    
T  23312658 gttaattatgttttaggtccctataaataggcgtgtttccaacattaattcctacttaaattttattaaatttttggtccc 23312738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 810
Target Start/End: Original strand, 4425903 - 4425970
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaat 810  Q
    ||||||||||||||||| |||||||||||||  ||||   ||| ||||||| |||||||||||||||||||    
T  4425903 gggttaaatatgtttttcgtccctataaaat--agggatctttcaagttta-gtccttacttaattttaat 4425970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 810
Target Start/End: Original strand, 8313092 - 8313159
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaat 810  Q
    |||||||||||||||||  |||||||||||| |||| |  ||| ||||||| |||||||||||||||||||    
T  8313092 gggttaaatatgtttttgatccctataaaatagaggtc--tttcaagttta-gtccttacttaattttaat 8313159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 747 - 847
Target Start/End: Complemental strand, 3407295 - 3407199
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatg-ttttagtccttacaaaaatactatgcact 845  Q
    |||||||||| ||||||||||||||| || | |||| ||||||| |||||||||||||||||||||  || ||||||||| || ||||| | ||||||||    
T  3407295 atatgtttttggtccctataaaattg-ggacctttt-aagttta-gtccttacttaattttaatag--tgcttttagtccatataaaaaaattatgcact 3407201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 747 - 847
Target Start/End: Original strand, 19332351 - 19332447
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatg-ttttagtccttacaaaaatactatgcact 845  Q
    |||||||||| ||||||||||||||| || | |||| ||||||| ||||||||||||||||||||  ||| ||||||||| || ||||| | ||||||||    
T  19332351 atatgtttttggtccctataaaattg-ggacctttt-aagttta-gtccttacttaattttaata--atgtttttagtccatataaaaaaattatgcact 19332445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 740 - 770
Target Start/End: Complemental strand, 35529830 - 35529800
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||||||||||||||||||||||||    
T  35529830 gggttaaatatgtttttagtccctataaaat 35529800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 747 - 849
Target Start/End: Original strand, 40272346 - 40272444
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactc 846  Q
    |||||||||| ||||||||||||||| || | ||||||| |||| |||||||||||||| ||||||  | ||||||||| || ||||| | |||||||||    
T  40272346 atatgttttttgtccctataaaattg-ggaccttttaaa-ttta-gtccttacttaattataatagtgt-ttttagtccatataaaaaaattatgcactc 40272441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 720
Target Start/End: Original strand, 41138846 - 41138895
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacat 720  Q
    ||||||||||| ||||| | ||||||||||| ||||| ||||||||||||    
T  41138846 gttaattgttgttgattaatcaaacggtgaaccacacatggatgccacat 41138895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 634
Target Start/End: Original strand, 43439969 - 43440030
Alignment:
Q  573 cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    |||||||||||||| |||| |||||||||| | ||  ||||| |||||||||||||| ||||    
T  43439969 cctataaataggcgtgttttcaacattagttcctacttaaattttattaaatttttggtccc 43440030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 9e-54; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 44492579 - 44492874
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||  ||||| ||||||||||| ||||||| || |       |  |    
T  44492579 agggttaattatgttttaggtccctataaataggcgcgtttccaacattaatccatacttaaattttattaaatttgtgatccccaatgtttttttctgt 44492678  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| |||||||||| | | | |||||||||| ||||||||||||| |||||||||| |||||||||||||||||||          |||||| |||||||    
T  44492679 tag-caaaataggtcctcgctgttaattgttactgattgagcaaatggtgaagcacgcgtggatgccacatctgacttttttat--gttggg-ttaaata 44492774  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    || ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  44492775 tggttttagtccctataaaattgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagt 44492870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 573 - 853
Target Start/End: Complemental strand, 20719612 - 20719335
Alignment:
Q  573 cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnn---caattaggcaaaataggttccca 668  Q
    |||||||||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||| ||||          |  |||| |||||||| | | |     
T  20719612 cctataaataggcgcgtttccaacattagtccctacttaaattttattacatttttgatccccaacgttttttttttccgttag-caaaatagatcctcg 20719514  T
Q  669 ccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaa 768  Q
    | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||           |  |||||||||||||||||||||||||||||    
T  20719513 ctgttaattgttgttgattgagcaaacggtgaagcacacgtggacgccacatctgactttttttttatt--gggttaaatatgtttttagtccctataaa 20719416  T
Q  769 attgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  20719415 attgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagtatta 20719335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 21438994 - 21439287
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| ||||||  ||| ||||||||||||||||||||||||||||| |||  ||||| |||||||||||||| |||| ||||       |  |    
T  21438994 agggttaattatgttttagatccctataaataggcgcgtttccaacattagtctatacttaaattttattaaatttttggtccccaacgtttttttcg-t 21439092  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| | |||||||| | | | |||||||||||||||||||||||| |||||||||||||||||||||||||||||           |||||| |||||||    
T  21439093 tag-cgaaataggtcctcgctgttaattgttgctgattgagcaaatggtgaagcacacgtggatgccacatctga---ttttttttgttggg-ttaaata 21439187  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||||||||||||| |||||| | ||||||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||| || ||    
T  21439188 tgtttttagtccctataaaattga-ggcattgt-aagttta-gtccttacttaattttaata-gttgttttagtacttacaaaaatactatgcattcggt 21439283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 42488145 - 42487972
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||          |||||| |||||||||||||||||| |||||||||    
T  42488145 gttaattgttgctgattgagcaaacggtgaagcacacatggatgccacatctgactttttt----gttggg-ttaaatatgtttttagtctctataaaat 42488051  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||  ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  42488050 tgagg-cattttaa-gtttaa-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagtatta 42487972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 553 - 853
Target Start/End: Original strand, 23787319 - 23787611
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccca-acgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| |||||||||||| |||||||||||||||||  |  ||||| |||||||||||||| ||||  |||       |  ||    
T  23787319 gggttaattatgttttaggtccctataaataggcgtgtttccaacattagtccccacttaaattttattaaatttttggtcccctacgtttttttccgtt 23787418  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||||| | | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||          |||| | ||||||||    
T  23787419 ag-caaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttt---gttgag-ttaaatat 23787513  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||||||||||||||||| |||||||| |||| | |||||||||| ||||| |||  |||||||||||||||||||||| |||||||||||||    
T  23787514 gtttttagtccctataaaattgagg-cattttaa-gtttcg-tccttactta-ttttagtagt-tgttttagtccttacaaaaatattatgcactcagta 23787608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 672 - 853
Target Start/End: Complemental strand, 43933212 - 43933038
Alignment:
Q  672 ttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaatt 771  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||          |||||| |||||||| ||||||||||||||||||||    
T  43933212 ttaatttttgctgattgagcaaacggtgaagcacacgtggatgtcacatctgactttttttt--gttggg-ttaaatatatttttagtccctataaaatt 43933116  T
Q  772 gagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  43933115 gagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcggtatta 43933038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 576 - 853
Target Start/End: Complemental strand, 23788116 - 23787847
Alignment:
Q  576 ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaattaggcaaaataggttcccaccgttaa 675  Q
    |||||||||||  |||||||||||| | | ||  ||||| |||||||||||||||||||||||       |  |||| |||||||||| | | | |||||    
T  23788116 ataaataggcgtatttccaacattaattcttacataaattttattaaatttttgatcccaacgttttttcccgttag-caaaataggtactcgctgttaa 23788018  T
Q  676 ttgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattgagg 775  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||||||      
T  23788017 ttgttgctgattgagaaaacggtgaagcacacgtggatgccacatctgactttatttt--gttggg-ttaaatatgtttttagtccctataaaattga-t 23787922  T
Q  776 gcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
     |||||| ||||||| ||||||||||||||||||||   ||||||||| || |||||||||||||||| |||||||||    
T  23787921 tcatttt-aagttta-gtccttacttaattttaata-tttgttttagttctcacaaaaatactatgcattcagtatta 23787847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 1373676 - 1373502
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||          |||| | ||||||||||||||||||||||||||||    
T  1373676 gttaattgttgctgattgagcaaacggtgaagtacacgtggatgccacatctgacttttttt---gttgag-ttaaatatgtttttagtccctataaaat 1373581  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| ||||||| |||||||||||||||||||| | |||||||||||||| ||||||| |||||||| |||||||    
T  1373580 tga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttaaaaaaatattatgcacttagtatta 1373502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 673 - 853
Target Start/End: Original strand, 20701074 - 20701247
Alignment:
Q  673 taattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattg 772  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||| |||          |||||| ||||||||| ||||||||||||||||||||    
T  20701074 taattgttgttgattgagcaaatggtgaagcacacgtggatgccacatccgactttttttt--gttggg-ttaaatatgattttagtccctataaaattg 20701170  T
Q  773 agggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| |||||| | ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  20701171 agg-cattttaa-gtttag-tgcttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagtatta 20701247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 574 - 853
Target Start/End: Original strand, 42486773 - 42487044
Alignment:
Q  574 ctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaattaggcaaaataggttcccaccgt 672  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||||||||| |||| || |       |   |  |||||||||||   | | ||    
T  42486773 ctataaataggcgcgtttccaacattagtccatacttaaattttattaaatttttggtccccaaagtttttttcccgttagcaaaataggtcatcgctgt 42486872  T
Q  673 taattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattg 772  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| | |||||||           ||  ||||||||||||||||||||||| |||||||     
T  42486873 taattgttgctgattgagcaaacagtgaagcacacatggatgctatatctgactttttt-----ttttggttaaatatgtttttagtccctgtaaaatta 42486967  T
Q  773 agggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  42486968 agg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactacgcactcagtatta 42487044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 556 - 852
Target Start/End: Original strand, 3104693 - 3104983
Alignment:
Q  556 ttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnn-caattagg 653  Q
    ||||||| |||||| |||| |||||||| ||| ||||||||||||||| ||||  ||||| ||||||||||||| ||||||| |        |  ||||     
T  3104693 ttaattatgttttaggtccctataaataagcgtgtttccaacattagttcatacttaaattttattaaattttttatcccaatgttttttttccgttag- 3104791  T
Q  654 caaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtt 753  Q
    ||||||||||   | | ||||||||||||||||||||||||| |||||||||||||||||||||||||   |          |||||| |||||||||||    
T  3104792 caaaataggtcatcgctgttaattgttgctgattgagcaaacagtgaagcacacgtggatgccacatcg--ctcttttttttgttggg-ttaaatatgtt 3104888  T
Q  754 tttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    |||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||    
T  3104889 tttagtccctataaaattga-ggcatttt-aagttta-gttcttacttaattttaata-gttattttagtccttacaaaaatactatgcactcaatatt 3104983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 554 - 853
Target Start/End: Complemental strand, 33001457 - 33001164
Alignment:
Q  554 ggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaatta 651  Q
    ||||||||| |||||| |||| ||||||||| || ||||||||||||||||| |   ||||| ||||||||||||||||||| ||||       |  |||    
T  33001457 ggttaattatgttttaggtccctataaatagacgtgtttccaacattagtccctgcttaaattttattaaatttttgatccccaacgtttttttccgtta 33001358  T
Q  652 ggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatg 751  Q
    | ||||||||||   | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||| ||||||| ||||    
T  33001357 g-caaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctga---ttttttttgtt-gggttaactatg 33001263  T
Q  752 tttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttac-aaaaatactatgcactcagta 850  Q
    ||||||||||||||||||||||||   |||| ||||| |  ||||||||||||||||||| | | ||||||||||||| ||||||| |||||||||||||    
T  33001262 tttttagtccctataaaattgagg--ctttttaagttca-ttccttacttaattttaata-gttattttagtccttacaaaaaatattatgcactcagta 33001167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 553 - 854
Target Start/End: Complemental strand, 44494096 - 44493803
Alignment:
Q  553 gggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcc-caacgnnnnnnncaatt 650  Q
    |||||||||| |||||| ||||| |||||| |||| ||||||||||||||||| ||  ||||| |||||||||||||| ||| |||||       |  ||    
T  44494096 gggttaattatgttttaggtccttataaattggcgtgtttccaacattagtccctacttaaattttattaaatttttggtcctcaacgtttttttccgtt 44493997  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || ||||||||||   ||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||           ||  ||||||||||    
T  44493996 ag-caaaataggtcatcactgttaattgttgttgattgagcaaacggtgaagcacacatggatgccacatctaactttttt-----ttttggttaaatat 44493903  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||| | ||||||||||| |||||||| ||| |  ||||||||||||||||||||  ||||||| ||||||| |||||||||||||| |||||    
T  44493902 gtttttagtccatgtaaaattgagg-cattttaa-gttcaa-tccttacttaattttaatagt-tgttttattccttaccaaaatactatgcacccagta 44493807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 653 - 853
Target Start/End: Complemental strand, 3105912 - 3105722
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    ||||||||||| | | | ||||||||||||||||||||||||||||||||||| | |||||||||||||||||           ||   |||||||||||    
T  3105912 gcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacgcatggatgccacatctgacttttt------tttttgttaaatatgt 3105819  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||| ||||||||| |||||||| ||||||| |||||||||||||||||||| | ||||||||| |||||| ||||||||||||||| |||||    
T  3105818 ttttagtccctgtaaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtacttacataaatactatgcactcggtatt 3105723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 671 - 843
Target Start/End: Complemental strand, 20721694 - 20721531
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||          |||||| |||||||||||||||| |||||||||||    
T  20721694 gttaattgttgctgattgagcaaacag--aagcacacgtggatgccacatctgactttttttt--gttggg-ttaaatatgtttttagcccctataaaat 20721600  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgca 843  Q
    ||| |||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  20721599 tga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatactatgca 20721531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 653 - 853
Target Start/End: Original strand, 18672064 - 18672250
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    ||||||||||| | | | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||           ||   ||  |||||||    
T  18672064 gcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacatggatgccacatctgacttt--------ttcttgt--aatatgt 18672153  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||| | ||||||||||| |||||||| |||||| ||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||    
T  18672154 ttttagtccttgtaaaattgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttaatccttacaaaaatgctatgcactcagtatt 18672249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 20719766 - 20719940
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||| | ||||| |||| | ||||||||||||||||||||||||||||          |||| | ||||||||||||||||||||| ||||||    
T  20719766 gttaattgttgttaattgaacaaatgatgaagcacacgtggatgccacatctgacttttttt---gttgag-ttaaatatgtttttagtccctttaaaat 20719861  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||  ||||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||||||    
T  20719862 tgagg-cattttaa-gtttaa-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgaacttagtatta 20719940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 555 - 853
Target Start/End: Complemental strand, 20721142 - 20720854
Alignment:
Q  555 gttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaattag 652  Q
    |||||||| |||||| |||| ||||||||||| | |||| ||||||||||| ||  ||||| |||||||||||||| |||| ||||       |  ||||    
T  20721142 gttaattatgttttaggtccctataaataggcacatttctaacattagtccctacttaaattttattaaatttttggtccccaacgtttttttccgttag 20721043  T
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
     |||||||||| | | | ||||||||||||||||||||||| | ||||| ||||| |||||| ||||||||||           ||  ||||||||||||    
T  20721042 -caaaataggtcctcgctgttaattgttgctgattgagcaaccagtgaatcacacatggatgtcacatctgactatttt-----ttttggttaaatatgt 20720949  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||| |||||||||  ||||||| ||||||| ||||||| |||||||||||| | |||||||||||||||  ||||||||  |||||||||||    
T  20720948 ttttagtccctgtaaaattga-agcatttt-aagttta-gtccttatttaattttaata-gttgttttagtccttac--aaatactagtcactcagtatt 20720855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 43931958 - 43932134
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||||||||||||||| || ||| |||| || ||           ||   |||||||||||||||||||||| ||||||    
T  43931958 gttaattgttgctgattgagcaaacggtgaagcacacatgaatgtcacacctaacttttttt----ttttagttaaatatgtttttagtccctgtaaaat 43932053  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtcctt--acaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| ||||||| |||||||||||||||||||| | |||||| ||||||  | ||||||||||||||||||||||||    
T  43932054 tga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttggtccttaaaaaaaaatactatgcactcagtatta 43932134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 571 - 725
Target Start/End: Original strand, 33000689 - 33000843
Alignment:
Q  571 gtcctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaattaggcaaaataggttcccac 669  Q
    |||||||||||||||||||||||||| ||||| | ||  ||||| |||||||||||||| |||| || |       |  |||| |||||||||| | | |    
T  33000689 gtcctataaataggcgcgtttccaacgttagttcctacttaaattttattaaatttttggtccccaatgtttttttccgttag-caaaataggtcctcgc 33000787  T
Q  670 cgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgac 725  Q
     |||||||||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  33000788 ggttaattgttgctgattgagtaaacggtgaaacacacgtggatgtcacatctgac 33000843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 18673288 - 18673116
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||| ||||||| |||||||| || |||||||||||||||||           ||  ||| ||||||||||||||||  | |||||     
T  18673288 gttaattgttgctgattaagcaaacagtgaagcatacatggatgccacatctgactttttt-----ttttggtcaaatatgtttttagtct-tgtaaaaa 18673195  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||| |||||| ||||||||||||| | |||||||||||||||||||||||||||  |||||||||    
T  18673194 tgagg-cattttaa-gtttag-tccttatttaattttaatagta-gttttagtccttacaaaaatactatgcgttcagtatta 18673116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 553 - 634
Target Start/End: Complemental strand, 20721817 - 20721735
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    |||||||||| |||||| |||| ||||||||||||||||| |||||||||||||||  ||||| |||||||||||||| ||||    
T  20721817 gggttaattatgttttaggtccctataaataggcgcgttttcaacattagtccatacttaaattttattaaatttttggtccc 20721735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 552 - 628
Target Start/End: Complemental strand, 1373797 - 1373721
Alignment:
Q  552 agggttaattaggttttacgtcctataaataggcgcgtttccaacattagtccatatctaaatgttattaaattttt 628  Q
    ||||||||||| |||||| || |||||||||| || ||||||||||||||||| ||  ||||| |||||||||||||    
T  1373797 agggttaattatgttttaggttctataaatagacgtgtttccaacattagtccctacttaaattttattaaattttt 1373721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 740 - 834
Target Start/End: Complemental strand, 41121159 - 41121069
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||||||||| ||||||||||| |||  || | ||  |||||||| ||||||||||||||||||||| | ||||||||||||||||||    
T  41121159 gggttaaatatgtttttggtccctataaagttg--ggaacttctaagtttag-tccttacttaattttaatagg-ttttttagtccttacaaaaa 41121069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 31435920 - 31435989
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||||||||||||||||||||||||||||  |  ||| ||||||| ||| |||||||||||||||||    
T  31435920 gggttaaatatgtttttagtccctataaaattgagacc--ttttaagttta-gtctttacttaattttaatag 31435989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 741 - 812
Target Start/End: Complemental strand, 4328016 - 4327948
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||||||||| |||||||| || | |||| ||||||| |||||||||||||||||||||    
T  4328016 ggttaaatatgtttttagtccctgtaaaattg-ggacctttt-aagttta-gtccttacttaattttaatag 4327948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 743 - 810
Target Start/End: Complemental strand, 13027855 - 13027791
Alignment:
Q  743 ttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaat 810  Q
    |||||||||||||| |||||||||||||||| | |||||| ||||||| |||||||||||||||||||    
T  13027855 ttaaatatgtttttggtccctataaaattga-gacatttt-aagttta-gtccttacttaattttaat 13027791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 574 - 629
Target Start/End: Complemental strand, 18673386 - 18673331
Alignment:
Q  574 ctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttg 629  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||| ||||||||||||||    
T  18673386 ctataaataggcgtgtttccaacattaatccctatttaaattttattaaatttttg 18673331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 740 - 835
Target Start/End: Original strand, 41120624 - 41120715
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaat 835  Q
    |||||||||||||||||  |||||||||||||| || | |||| ||||||| |||||||||||||||||||| | | |||||||||||| ||||||    
T  41120624 gggttaaatatgtttttgatccctataaaattg-ggacctttt-aagttta-gtccttacttaattttaata-gtttttttagtccttaaaaaaat 41120715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 629
Target Start/End: Original strand, 1373262 - 1373340
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttg 629  Q
    |||||| |||| |||||| |||| |||||||||||  ||||||||||||||||| ||  ||||| ||||||||||||||    
T  1373262 agggttgattatgttttaggtccctataaataggcatgtttccaacattagtccctacataaattttattaaatttttg 1373340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 740 - 829
Target Start/End: Original strand, 19176644 - 19176729
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttac 829  Q
    ||||||||||||||||||||||||||| |||||  || ||| | |||||||| |  |||||||||||||||||| | |||||||||||||    
T  19176644 gggttaaatatgtttttagtccctatagaattg--ggaattcttaagtttagtta-ttacttaattttaatagg-ttttttagtccttac 19176729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 834
Target Start/End: Complemental strand, 35498970 - 35498881
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    |||||| |||||||||  ||||||||||||||||  | |||  |||||||| ||||||||||||||||||||| | ||||||||| ||||||||    
T  35498970 ggttaattatgtttttgatccctataaaattgagaactttt--aagtttag-tccttacttaattttaatagg-ttttttagtccctacaaaaa 35498881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 743 - 812
Target Start/End: Complemental strand, 44287092 - 44287026
Alignment:
Q  743 ttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||||||| ||||||||||||||  ||| | ||| ||||||| |||||||||||||||||||||    
T  44287092 ttaaatatgtttttggtccctataaaatt--ggggactttcaagttta-gtccttacttaattttaatag 44287026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 604
Target Start/End: Complemental strand, 3106005 - 3105952
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtcc 604  Q
    ||||||||||| |||||| |||| |||||||||| |||||||||||||||||||    
T  3106005 agggttaattatgttttaggtccctataaataggtgcgtttccaacattagtcc 3105952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 834
Target Start/End: Original strand, 14200839 - 14200929
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcat-tttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||||| ||| ||||||||||||||||   ||| ||| ||||||| |||||||||||||||||||| | | ||||||||| ||||||||    
T  14200839 gggttaaatatgtatttggtccctataaaattga---catcttttaagttta-gtccttacttaattttaata-gcttttttagtccctacaaaaa 14200929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 31771198 - 31771267
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||| |||||||||||||||||  |  ||| ||| ||| |||||||||||||||||||||    
T  31771198 gggttaaatatgtttttggtccctataaaattgagacc--ttttaagctta-gtccttacttaattttaatag 31771267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 740 - 772
Target Start/End: Complemental strand, 8794831 - 8794799
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattg 772  Q
    |||||||||||||||||||||||||||||||||    
T  8794831 gggttaaatatgtttttagtccctataaaattg 8794799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 671 - 714
Target Start/End: Complemental strand, 21440291 - 21440250
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatg 714  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  21440291 gttaattgttgctgattgagcaaacg--gaagcacacgtggatg 21440250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 35498452 - 35498521
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||||||||||||| |||||||||||| || | |||| ||||||| ||| |||||||||||||||||    
T  35498452 gggttaaatatgtttttagttcctataaaattg-ggacctttt-aagttta-gtctttacttaattttaatag 35498521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 834
Target Start/End: Original strand, 33831999 - 33832089
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||| ||||||||| ||| |||||||||||  || | ||  |||||||| ||||||||||||||||||||| | ||||||||| ||||||||    
T  33831999 gggttaattatgtttttggtctctataaaattg--ggaacttctaagtttag-tccttacttaattttaatagg-ttttttagtccatacaaaaa 33832089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 747 - 812
Target Start/End: Original strand, 3117864 - 3117926
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||| |||||||||||||||||  |  ||| ||||||| |||||||||||||||||||||    
T  3117864 atatgtttttggtccctataaaattgagatc--ttttaagttta-gtccttacttaattttaatag 3117926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 747 - 849
Target Start/End: Original strand, 9111458 - 9111556
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactc 846  Q
    |||||||||| ||||||||||||||| || | |||| ||||||| |||||||||||||| ||||||  | ||||||||| || ||||| | |||||||||    
T  9111458 atatgttttttgtccctataaaattg-ggacctttt-aagttta-gtccttacttaattataatagtgt-ttttagtccatataaaaaaattatgcactc 9111553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 771
Target Start/End: Original strand, 27694423 - 27694453
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaatt 771  Q
    |||||||||||||||||||||||||||||||    
T  27694423 ggttaaatatgtttttagtccctataaaatt 27694453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 604
Target Start/End: Original strand, 18671972 - 18672025
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtcc 604  Q
    ||||||||||| ||||||  ||| |||||||||| |||||||||||||||||||    
T  18671972 agggttaattatgttttagatccatataaataggtgcgtttccaacattagtcc 18672025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 628
Target Start/End: Original strand, 32317888 - 32317965
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaattttt 628  Q
    |||||||||||||||| | |||| |||||||| ||| | |||||||||| || | ||| ||||| |||||||||||||    
T  32317888 agggttaattaggtttaaagtccctataaataagcgagcttccaacattggttcctatttaaattttattaaattttt 32317965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 634
Target Start/End: Original strand, 38276062 - 38276123
Alignment:
Q  573 cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||||||||||  |||||||||||||||  ||  ||||| |||||||||||||| ||||    
T  38276062 cctataaataggcgtatttccaacattagtctctacataaattttattaaatttttggtccc 38276123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 5e-52; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 734586 - 734722
Alignment:
Q  8 cctttcacaaccaccatatgagatttgcaatcagttatcacttcttcaacacctggaaaatctttcaatgaccgacgaactttccgagcacagccttcac 107  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  734586 cctttcacaaccaccgtatgagacttgcaatcagctatcacttcttcaacacctggaaaatctttcaacgaccgacgaactttccgagcacagctttcac 734685  T
Q  108 aatgcatgaaaattctcagcaaaatctctgctggagg 144  Q
    |||||||||||| | |||||||||||||||| |||||    
T  734686 aatgcatgaaaactttcagcaaaatctctgccggagg 734722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 572 - 850
Target Start/End: Complemental strand, 25423260 - 25422991
Alignment:
Q  572 tcctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaattaggcaaaataggttcccaccg 671  Q
    ||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||| ||||||||       |  |||| |||||||||| | | | |    
T  25423260 tcctataaataggcgcgtttccaacattagtccctacttaaattttattaaatttttggtcccaacgtttttttccgttag-caaaataggtcctcgctg 25423162  T
Q  672 ttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaatt 771  Q
    |||||||||| ||||||||||||| |||||||| || |||||||||||||||||           ||   |||||||||||||||||||||| |||||||    
T  25423161 ttaattgttgatgattgagcaaacagtgaagcatacatggatgccacatctgacttctttt----tttcagttaaatatgtttttagtccctgtaaaatt 25423066  T
Q  772 gagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    |||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  25423065 gagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttaaaaaaatactatgcactcagta 25422991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 33688373 - 33688667
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||||||| ||||||||||||||||| | ||  ||||| |||||||||||||| |||| ||||       |  |    
T  33688373 agggttaattatgttttaggtccctataaataggtgcgtttccaacattagttcctacttaaattttattaaatttttggtccccaacgtttttttccgt 33688472  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| |||||||||| | ||  ||||||||||||||||||||||| ||||||||||||  |||||| ||||||||||           ||  |||||||||    
T  33688473 tag-caaaataggtcctcagtgttaattgttgctgattgagcaaccggtgaagcacatatggatgtcacatctgactttttt-----ttttggttaaata 33688566  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
     ||||||||||||| ||||||||||| |||||||| |||||  ||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  33688567 cgtttttagtccctgtaaaattgagg-cattttaaggtttaa-tccttacttaattttaatagt-tgttttagtccttacaaaaatattatgcactcagt 33688663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 654 - 853
Target Start/End: Complemental strand, 33689784 - 33689597
Alignment:
Q  654 caaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtt 753  Q
    |||||||||| | | | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||           ||  |||||||||||||    
T  33689784 caaaataggtactcgctgttaattgttgctgattgagcaaacgatgaagcacacgtggatgccacatctgacttt--------ttttggttaaatatgtt 33689693  T
Q  754 tttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||||||||| ||||||||||| |||||||| |||||  ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  33689692 tttagtccctgtaaaattgagg-cattttaa-gtttaa-tccttacttaattttaatagt-tgttttaatccttacaaaaatactatgcactcagtatta 33689597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 653 - 853
Target Start/End: Complemental strand, 37329893 - 37329699
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    ||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||    
T  37329893 gcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttttt-gttggg-ttaaatatgt 37329796  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||| |||||||||| |||| |||||||| |||||| || |||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||    
T  37329795 ttttagtacctataaaatcgagg-cattttaa-gtttag-tctttacttaattttaatagt-tgttttagtcctcacaaaaatactatgcattcagtatt 37329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 552 - 853
Target Start/End: Complemental strand, 44210081 - 44209786
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnn-caa 648  Q
    ||||||||| | ||||||||||| |||||||||||||||||  ||||||||||  ||  ||||| ||||||||||||||||||| ||||        |      
T  44210081 agggttaatcatgttttacgtccctataaataggcgcgtttttaacattagtctttacttaaattttattaaatttttgatccccaacgttttttttctg 44209982  T
Q  649 ttaggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaat 748  Q
    ||||  ||||||||| | | | ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||          |||||  ||||||    
T  44209981 ttagt-aaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtagatgtcacatctgacttttttt---gttggc-ttaaat 44209887  T
Q  749 atgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcag 848  Q
    |||||||||||| |||||||||||||| |||||||| |||||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  44209886 atgtttttagtctctataaaattgagg-cattttaa-gtttag-tccttacttaattttaatagca-gttttattccttacaaaaatactatgcactcag 44209791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 671 - 846
Target Start/End: Original strand, 53570825 - 53570992
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||          |||||| ||||||||||||||||||||||||||||    
T  53570825 gttaattgttgttgattgagcaaacggtcaagcacacgtggatgccacatctaacttttttt---gttggg-ttaaatatgtttttagtccctataaaat 53570920  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactc 846  Q
    ||| |||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  53570921 tga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatactatgcactc 53570992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 25421882 - 25422058
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||    
T  25421882 gttaattgttactgattgagcaaacggtgaagcacacgtggatgccacatctgacctttttttt-gttggg-ttaaatatgtttttagtccctataaaat 25421979  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| ||||||| |||||||||||||||||| | | ||||| ||||||||||||| ||||||||||| |||||||    
T  25421980 tga-ggcatttt-aagttta-gtccttacttaattttaaca-gttgtttcagtccttacaaaagtactatgcacttagtatta 25422058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 31316356 - 31316531
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||          |||||| ||||||||||||||||||| ||||||||    
T  31316356 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctaacttttttttt-gttggg-ttaaatatgtttttagtcc-tataaaat 31316452  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||| |||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||    
T  31316453 tgagg-cattttaa-gtttag-tccttacttaattttaataat-tgttttagtccttacaaaaataccatgcactcagtatta 31316531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 552 - 853
Target Start/End: Complemental strand, 31318152 - 31317860
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||||||||||||||| ||||||||||| ||  ||||| |||||||||||||| |||| ||||       | ||    
T  31318152 agggttaattatgttttaggtccctataaataggcgcgtttctaacattagtccctacttaaattttattaaatttttggtccccaacgtttttttccat 31318053  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| ||||||||||   | | ||||||||||| |||||||||||||   ||||||||| |||||||||||||||||          |||||  |||||||    
T  31318052 tag-caaaataggtcatcgctgttaattgttgttgattgagcaaacaacgaagcacacatggatgccacatctgactttttt----gttgg--ttaaata 31317960  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    ||||||||||||||| |||||||||| |||||||| |||||| ||||||||||||| |||| |  |||||| |||||||||||||||||||||||| |||    
T  31317959 tgtttttagtccctaaaaaattgagg-cattttaa-gtttag-tccttacttaattctaatcgt-tgtttttgtccttacaaaaatactatgcacttagt 31317864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 53568971 - 53569146
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||          |||||| ||||||||||||||||| ||||||||||    
T  53568971 gttaattgttgctgattgagcaaacagtgaagcacacgtggatgcaacatctgacttttttt---gttggg-ttaaatatgtttttagttcctataaaat 53569066  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttac-aaaaatactatgcactcagtatta 853  Q
    ||| | |||||| ||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  53569067 tga-gacatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaaatactatgcactcagtatta 53569146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 11671112 - 11670938
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| ||||||| ||          |||||| |||||| |||||||||||||||||||||    
T  11671112 gttaattgttgatgattgagcaaacggtgaagcacacgtagatgtcacatctcacttttttt---gttggg-ttaaatttgtttttagtccctataaaat 11671017  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    | ||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  11671016 taagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagtatta 11670938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 653 - 853
Target Start/End: Complemental strand, 53572023 - 53571833
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    ||||||||||| | | | |||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||          |||||| ||||||||||    
T  53572023 gcaaaataggtcctcgctgttaattgttgctgtttgagcaaacgg--aagcacatgtggatgccacatctgacttttttt---gttggg-ttaaatatgt 53571930  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| ||||    
T  53571929 ttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatactatgcattcaatatt 53571834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 11669818 - 11670110
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcc-caacgnnnnnnncaat 649  Q
    ||||||||||  |||||| |||| |||||| ||||||||||||||||||||||| ||| ||||| ||||||||| |||| ||| | |||       |  |    
T  11669818 agggttaattgtgttttaggtccctataaaaaggcgcgtttccaacattagtccctatttaaattttattaaatatttggtcctcgacgtttttttccgt 11669917  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| |||||||||| | | | ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||           |||||| |||||||    
T  11669918 tag-caaaataggtcctcgctgttaattgttgttgattgagcaaacgg--aagcacgtgtggatgccacatctga---ttttttttgttggg-ttaaata 11670010  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| |    
T  11670011 tgtttttaatccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatactatgcattcaat 11670106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 573 - 853
Target Start/End: Complemental strand, 25244178 - 25243906
Alignment:
Q  573 cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcc-caacgnnnnnnncaattaggcaaaataggttcccaccg 671  Q
    |||||||||||||||||||||||||||| | | ||| ||||| ||||||||||||| |||| ||  |       |  |||| |||||||| | | | | |    
T  25244178 cctataaataggcgcgtttccaacattaattcctatttaaattttattaaattttttatcctcagtgtttttttccgttag-caaaatagatcctcgctg 25244080  T
Q  672 ttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaatt 771  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||||          |||| | |||||||||||||||||||||||||||||    
T  25244079 ttaattgttgctgattgagcaaacagtgaagcatacatggatgccacatctgacttttttt---gttgag-ttaaatatgtttttagtccctataaaatt 25243984  T
Q  772 gagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    || |||||||| ||||||| ||||||||||||||||| || | | |||| ||||||||||||||||||||||||||||||||    
T  25243983 ga-ggcatttt-aagttta-gtccttacttaattttatta-gttttttttgtccttacaaaaatactatgcactcagtatta 25243906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 553 - 853
Target Start/End: Complemental strand, 10322914 - 10322621
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| |||||||||||| ||||||||||||||||| ||  ||||| |||||||||||||| |||| || |       |  ||    
T  10322914 gggttaattatgttttaggtccctataaataggcgagtttccaacattagtccctacttaaattttattaaatttttggtccccaatgtttttttctttt 10322815  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||||| | | | ||||||||||||||||| ||||||| ||||| ||||| |||||||||||| ||||           ||  ||||||||||    
T  10322814 ag-caaaataggtccacgctgttaattgttgctgattaagcaaacagtgaaccacacatggatgccacat-tgactttttttt---ttttggttaaatat 10322720  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||||| |||||||||||  ||||||  |||||| ||||||||||||| ||||||  ||||||||||||||||||| ||||||||||||||||    
T  10322719 gtttttagtccctgtaaaattgaggt-attttac-gtttag-tccttacttaattataatagt-tgttttagtccttacaaaactactatgcactcagta 10322624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 552 - 847
Target Start/End: Original strand, 44208573 - 44208860
Alignment:
Q  552 agggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| ||| | |||||||| ||||||| |||||||||||| ||  ||||| |||||||||||||| |||| ||||       |  |    
T  44208573 agggttaattatgttttaggtctttataaatagacgcgttttcaacattagtccctacttaaattttattaaatttttggtccccaacgtttttttccgt 44208672  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| ||||||||||   | | ||||||||||| ||||||||||||| |||||||  || |||||||||||||||||           ||  |||||||||    
T  44208673 tag-caaaataggtcatcgctgttaattgttgttgattgagcaaacagtgaagcgtacatggatgccacatctgactttttt-----ttttggttaaata 44208766  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactca 847  Q
    |||||||||||||| ||||||||| |||||||| ||||||| ||||||||||| |||||||| | |||||||||||||||||||||| ||||||||||    
T  44208767 tgtttttagtccctgtaaaattga-ggcatttt-aagttta-gtccttacttatttttaata-gttgttttagtccttacaaaaatattatgcactca 44208860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 672 - 853
Target Start/End: Original strand, 10321513 - 10321686
Alignment:
Q  672 ttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaatt 771  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||||| ||||           |||   ||||||||||||||||||||| |||||||    
T  10321513 ttaattgttgctgattaagcaaacggtgaaccacacatggatgccacat-tgactttttttttttttg---ttaaatatgtttttagtccctgtaaaatt 10321608  T
Q  772 gagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||| |||||||| |||||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  10321609 gagg-cattttaa-gtttag-tccttactcaattttaatagt-tgttttagtccttacaaaaatactatgcactcagtatta 10321686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 31470660 - 31470953
Alignment:
Q  552 agggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatc-ccaacgnnnnnnncaat 649  Q
    ||||||||||| |||||| ||||| ||||||||||  |||| |||||||||||| ||  ||||| |||||||||||||| || || ||        |  |    
T  31470660 agggttaattatgttttaggtccttataaataggcatgttttcaacattagtccctacttaaattttattaaatttttggtctccgacatttttttccgt 31470759  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| |||||||||| | | | |||||||||||||||||||||||||||  |||||||| | |||||||||||||||          |||||  |||||||    
T  31470760 tag-caaaataggtcctcgctgttaattgttgctgattgagcaaacgg--aagcacacatagatgccacatctgactttttttt--gttgga-ttaaata 31470853  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||||||||||||| | |||||| ||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||| || ||| |    
T  31470854 tgtttttagtccctataaaattga-gacatttt-aagttta-gtcattacttaattttaata-gttgttttagtccttacaaaaatactatacattcaat 31470949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 553 - 853
Target Start/End: Complemental strand, 35061411 - 35061129
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaa-cgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| ||||||||||||||||| |||||||||||| ||  ||||| ||||||||||||||||||||| ||       |  ||    
T  35061411 gggttaattatgttttaggtccctataaataggcgcgttttcaacattagtccctacttaaattttattaaatttttgatcccaaacgtttttttccgtt 35061312  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||||| | | |          |||| |||||||||||||||||||||||||| | ||||||||||||          |||||| ||||||||    
T  35061311 ag-caaaataggtcctcgc----------tgctaattgagcaaacggtgaagcacacgtgta-gccacatctgactttttttt--gttggg-ttaaatat 35061227  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    |||||||| |||||||||||||||| |||||  |||||| |||| | |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  35061226 gtttttagcccctataaaattgagg-cattt--aagttt-ggtcgtgacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagta 35061132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 553 - 809
Target Start/End: Original strand, 15562628 - 15562877
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||||||||| ||  ||||| ||||| |||||||| |||| ||||       |  ||    
T  15562628 gggttaattatgttttaggtccctataaataggcgcgtttccaacattagtccctacttaaat-ttattgaatttttggtccccaacgtttttttctgtt 15562726  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || | |||||||| | | | |||||||||||||||||||||||||||| |||||||||| |||||||||||||||          ||| |||||||||||    
T  15562727 ag-cgaaataggtcctcgctgttaattgttgctgattgagcaaacggtaaagcacacgttgatgccacatctgac---tttttttgtt-gggttaaatat 15562821  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaa 809  Q
     |||||||||| ||||||||||| || ||||| | ||||| ||||||||||||||||||    
T  15562822 ttttttagtccgtataaaattga-ggtatttt-atgttta-gtccttacttaattttaa 15562877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 741 - 834
Target Start/End: Complemental strand, 7491110 - 7491021
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||||||||||||||||||||||| |  | |||| ||||||||  || |||||||||||||||||| | ||||||||||||||||||    
T  7491110 ggttaaatatgtttttagtccctataaaattaa--gaatttcaaagttta-ttctttacttaattttaatagg-ttttttagtccttacaaaaa 7491021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 23473893 - 23473824
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||||||||||||||||| ||  |  |||| ||||||| |||||||||||||||||||||    
T  23473893 gggttaaatatgtttttagtccctataaaatcga--gacttttgaagttta-gtccttacttaattttaatag 23473824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 573 - 629
Target Start/End: Complemental strand, 45046789 - 45046733
Alignment:
Q  573 cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttg 629  Q
    ||||||||||| |||||||||||||||||||| ||  ||||| ||||||||||||||    
T  45046789 cctataaatagacgcgtttccaacattagtccctacttaaattttattaaatttttg 45046733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 740 - 810
Target Start/End: Original strand, 19522593 - 19522660
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaat 810  Q
    ||||||||||||||||| ||||||||||||| ||||   |||| ||||||| |||||||||||||||||||    
T  19522593 gggttaaatatgtttttggtccctataaaatagagg--tttttcaagttta-gtccttacttaattttaat 19522660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 552 - 722
Target Start/End: Original strand, 35054882 - 35055053
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgat-cccaacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| ||||||||| ||| ||| |||||||||| | ||  ||||| |||||||||||||| | |||||||       | ||    
T  35054882 agggttaattatgttttaggtccctataaatagacgcattttcaacattagttcctacttaaattttattaaatttttggtccccaacgtttttttccat 35054981  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatct 722  Q
    || |||||||||||   |   ||||| ||||| ||||||||||||||||||| ||||| || |||||||||||    
T  35054982 ta-gcaaaataggtcatcgttgttaactgttgttgattgagcaaacggtgaaacacacatgtatgccacatct 35055053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 553 - 627
Target Start/End: Original strand, 40170070 - 40170145
Alignment:
Q  553 gggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttt 627  Q
    |||||||||| |||||| ||||| | ||||||||  ||||||||||||||||||||| ||||| |||||| |||||    
T  40170070 gggttaattatgttttaggtccttacaaataggcttgtttccaacattagtccatatttaaattttattatatttt 40170145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 834
Target Start/End: Complemental strand, 10085902 - 10085813
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    |||||||||||||||| |||| |||||||||  ||| | ||||||||||| |||||||| ||||||||||| | | ||||||||| ||||||||    
T  10085902 ggttaaatatgtttttggtccttataaaatt--gggaactttaaagttta-gtccttacataattttaata-gcttttttagtccctacaaaaa 10085813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 10085368 - 10085437
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||| ||||| ||||||||||||||||||||||  |  ||| ||||||| |||||||||||||||||||||    
T  10085368 gggttatatatgattttagtccctataaaattgagacc--ttttaagttta-gtccttacttaattttaatag 10085437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 575 - 628
Target Start/End: Original strand, 31316260 - 31316313
Alignment:
Q  575 tataaataggcgcgtttccaacattagtccatatctaaatgttattaaattttt 628  Q
    |||||||||| ||||||||||||||||||| ||  ||||| |||||||||||||    
T  31316260 tataaataggtgcgtttccaacattagtccctacttaaattttattaaattttt 31316313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 628
Target Start/End: Original strand, 45045199 - 45045276
Alignment:
Q  552 agggttaattaggttttacgt-cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaattttt 628  Q
    ||||||||||| |||| | || |||||||||| |||| |||||||||||||||| ||| ||||| |||||| ||||||    
T  45045199 agggttaattatgtttaaagttcctataaatatgcgcatttccaacattagtccctatttaaattttattatattttt 45045276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 608
Target Start/End: Complemental strand, 53569377 - 53569320
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatat 608  Q
    ||||||||||| |||||| |||| ||||||| || |||||||||||||||||||||||    
T  53569377 agggttaattatgttttaggtccctataaatcggagcgtttccaacattagtccatat 53569320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 626
Target Start/End: Original strand, 53570707 - 53570780
Alignment:
Q  553 gggttaattaggttttacgtcctataaataggcgcgtttccaacattagtccatatctaaatgttattaaattt 626  Q
    |||||||||| |||||| || |||||||||||  |||||  ||||||||||||||  ||||| |||||||||||    
T  53570707 gggttaattatgttttaggttctataaataggttcgtttttaacattagtccatacttaaattttattaaattt 53570780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 792 - 836
Target Start/End: Complemental strand, 4850466 - 4850422
Alignment:
Q  792 gtccttacttaattttaataggatgttttagtccttacaaaaata 836  Q
    |||||||||||||||||||||  | ||||||||||||||||||||    
T  4850466 gtccttacttaattttaatagttttttttagtccttacaaaaata 4850422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 817 - 853
Target Start/End: Original strand, 35055079 - 35055115
Alignment:
Q  817 ttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||||||||||||||||||||||||||||| |||||    
T  35055079 ttttagtccttacaaaaatactatgcactcattatta 35055115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 602
Target Start/End: Original strand, 10321401 - 10321452
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagt 602  Q
    ||||||||||| ||||||  ||| ||||||||||||||||||||||||||||    
T  10321401 agggttaattatgttttagatccctataaataggcgcgtttccaacattagt 10321452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 810
Target Start/End: Complemental strand, 19523133 - 19523066
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaat 810  Q
    ||||||||||||||||| |||||||||||||  ||||   ||| ||||||| |||||||||||||||||||    
T  19523133 gggttaaatatgtttttggtccctataaaat--agggacctttcaagttta-gtccttacttaattttaat 19523066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 771
Target Start/End: Complemental strand, 40391149 - 40391118
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaatt 771  Q
    ||||||||||||||||||||||||||||||||    
T  40391149 gggttaaatatgtttttagtccctataaaatt 40391118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 747 - 847
Target Start/End: Original strand, 48738397 - 48738493
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatg-ttttagtccttacaaaaatactatgcact 845  Q
    |||||||||| |||||||||||||||||  |  ||| ||||||| |||||||||||||||||||||  || ||||||||| || ||||| | ||||||||    
T  48738397 atatgtttttggtccctataaaattgagatc--ttttaagttta-gtccttacttaattttaatag--tgcttttagtccatataaaaaaattatgcact 48738491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 629
Target Start/End: Complemental strand, 13086526 - 13086448
Alignment:
Q  552 agggttaattaggttttacgt-cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttg 629  Q
    ||||||||||| |||| | || ||||||||||||||| ||| ||||||||||||  |  ||||| ||||||||||||||    
T  13086526 agggttaattatgtttaaggttcctataaataggcgcattttcaacattagtcccaacttaaattttattaaatttttg 13086448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 747 - 847
Target Start/End: Original strand, 13508756 - 13508852
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatg-ttttagtccttacaaaaatactatgcact 845  Q
    |||||||||| ||||||||||||||| || | |||| ||||||| |||||||||||||||||||||  || ||||||||| || ||||| | ||||||||    
T  13508756 atatgtttttggtccctataaaattg-ggacctttt-aagttta-gtccttacttaattttaatag--tgcttttagtccatataaaaaaattatgcact 13508850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 740 - 774
Target Start/End: Complemental strand, 43938353 - 43938319
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgag 774  Q
    ||||||||||||||||| |||||||||||||||||    
T  43938353 gggttaaatatgtttttggtccctataaaattgag 43938319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 834
Target Start/End: Original strand, 51395489 - 51395578
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    |||||||||||||||| || ||||||||||  |||| | ||  ||||||| |||||||||||||||||||| | | ||||||||| ||||||||    
T  51395489 ggttaaatatgtttttggttcctataaaat--agggaacttctaagttta-gtccttacttaattttaataag-ttttttagtccctacaaaaa 51395578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 811
Target Start/End: Complemental strand, 51396025 - 51395958
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaata 811  Q
    ||||||||||||||||| |||||||||||||| || | |||| ||||||| ||||||| ||||||||||||    
T  51396025 ggttaaatatgtttttaatccctataaaattg-ggacctttt-aagttta-gtccttatttaattttaata 51395958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 792 - 834
Target Start/End: Complemental strand, 55938440 - 55938399
Alignment:
Q  792 gtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  55938440 gtccttacttaattttaata-gattttttagtccttacaaaaa 55938399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 741 - 809
Target Start/End: Complemental strand, 28448799 - 28448734
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaa 809  Q
    |||||||||||||||| ||||||||||||||| |  |  ||| |||||||| |||||||||||||||||    
T  28448799 ggttaaatatgttttttgtccctataaaattgggacc--tttcaagtttag-tccttacttaattttaa 28448734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 629
Target Start/End: Original strand, 53568852 - 53568929
Alignment:
Q  553 gggttaattaggttttacgt-cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttg 629  Q
    |||||||||| |||||| || |||||||||||||| |||| |||||||| ||  ||  ||||| ||||||||||||||    
T  53568852 gggttaattatgttttaggttcctataaataggcgtgttttcaacattaatctttacttaaattttattaaatttttg 53568929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 2e-48; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 553 - 853
Target Start/End: Complemental strand, 46331962 - 46331671
Alignment:
Q  553 gggttaattaggttttacgtcctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaa-cgnnnnnnncaatta 651  Q
    ||||||||||  ||||| ||||| |||||||||||||||||||||||||||| ||  ||||| |||||||||||||| || ||| ||       || |||    
T  46331962 gggttaattatattttaggtcctgtaaataggcgcgtttccaacattagtccctacttaaattttattaaatttttggtctcaaacgtttttttcagtta 46331863  T
Q  652 ggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatg 751  Q
    | |||||||||| | | | |||||||||| |||||||||||||||||||||||||| |||||||||||||||||           ||   ||||||||||    
T  46331862 g-caaaataggtcctcgctgttaattgttactgattgagcaaacggtgaagcacacatggatgccacatctgactttttt-----tttttgttaaatatg 46331769  T
Q  752 tttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtat 851  Q
    |||||||||||| ||||||||||| |||||||| |||||| || |||||||||||||||||  | |||||||||||||||||||||||||||||||||||    
T  46331768 tttttagtccctgtaaaattgagg-cattttaa-gtttag-tctttacttaattttaatagt-tattttagtccttacaaaaatactatgcactcagtat 46331673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 33624604 - 33624779
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||          |||| | ||||||||||||||||||||||||||||    
T  33624604 gttaattgttgctgattgagcaaacggtgaaacacacgtggatgccacatctgacattttttt--gttgtg-ttaaatatgtttttagtccctataaaat 33624700  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||||    
T  33624701 tga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaataccatgcactcaatatta 33624779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 38200046 - 38199872
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||          |||||| |||||||| |||||||||||||||||||    
T  38200046 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgtcacatctgacttttttt---gttggg-ttaaatatatttttagtccctataaaat 38199951  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||| |||| |||||||    
T  38199950 tga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatactatacacttagtatta 38199872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 579 - 853
Target Start/End: Original strand, 46330522 - 46330790
Alignment:
Q  579 aataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaattaggcaaaataggttcccaccgttaatt 677  Q
    |||||||| ||||||||||||||||| ||  ||||| ||||||||||||| ||||| ||||           | |||||||||||| | | | |||||||    
T  46330522 aataggcgtgtttccaacattagtccctacttaaattttattaaattttttatccccaacgttttttttccgttggcaaaataggtcctcgctgttaatt 46330621  T
Q  678 gttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattgagggc 777  Q
    |||||||| |||||||| |||||||||||| |||||||||||||||||          |||||| ||||||||||||||||||||||||||||||| |||    
T  46330622 gttgctgaatgagcaaatggtgaagcacacatggatgccacatctgactttttttt--gttggg-ttaaatatgtttttagtccctataaaattga-ggc 46330717  T
Q  778 attttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| ||||||| |||||||||||||||||||| | |||||||||||||| |||||||||||||||||| |||||    
T  46330718 atttt-aagttta-gtccttacttaattttaata-gttgttttagtccttataaaaatactatgcactcaatatta 46330790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 552 - 853
Target Start/End: Complemental strand, 33626003 - 33625711
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| ||||||||| || ||||||| ||||||| | ||  ||||| |||||||||||||| |||| ||||       |  |    
T  33626003 agggttaattatgttttaggtccctataaatagacgtgtttccatcattagttcctacttaaattttattaaatttttggtccccaacgtttttttccgt 33625904  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| |||||||||||| | | ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||           ||   ||||||||    
T  33625903 tag-caaaataggttctcgctgttaattgttgttgattgagcaaacggtgaagcacacatggatgccacatctgactttttt-----tttttgttaaata 33625810  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||  | ||||||||||||||| ||||||||||| |||||||    
T  33625809 tgtttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaattttaat-cgttgttttagtccttac-aaaatactatgtactcagt 33625715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 15131805 - 15131633
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||           ||   |||||||||||||||||||||||||||||    
T  15131805 gttaattgttgctgattgagcaaacggtgaagcacacatggatgccacatatgacttttt------tttttgttaaatatgtttttagtccctataaaat 15131712  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||| |||||||||||||||||| |  ||||||||||||||||||||||| |||||||||||||||    
T  15131711 tgagg-cattttaa-gtttag-tccttacttaattttaatcgt-tgttttagtccttacaaaaataccatgcactcagtatta 15131633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 553 - 853
Target Start/End: Complemental strand, 45959256 - 45958962
Alignment:
Q  553 gggttaattaggttttacgtc-ctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatc-ccaacgnnnnnnncaatt 650  Q
    |||||||||| |||||| ||| |||||||||||  |||||||||||||||||  ||  ||||| |||||||| |||||||| ||||||       |  ||    
T  45959256 gggttaattatgttttaggtctctataaataggttcgtttccaacattagtctctacttaaattttattaaaattttgatctccaacgtttttttcggtt 45959157  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||| ||||||| |   ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||            | |||||||||||    
T  45959156 ag-caaactaggttctccttgtttattgttgctgattgaacaaacggtgaagcacacgtggatgccacatctgactttttttta---ttgggttaaatat 45959061  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||  |||||||||| ||||||||||| |||||  ||||||||||||||||||||  |||||||||||||| ||||||| |||||||||||||    
T  45959060 gtttttagtctatataaaattg-gggcattttaa-gtttat-tccttacttaattttaatagt-tgttttagtccttagaaaaataatatgcactcagta 45958965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 553 - 853
Target Start/End: Original strand, 38198761 - 38199053
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccca-acgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| |||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||| ||||  | |       |  ||    
T  38198761 gggttaattatgttttaggtccctataaataggcgtgtttccaacattagtccctatttaaattttattaaatttttggtccccgatgtttttttccgtt 38198860  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||| ||||| | | | ||||||||||| ||||||||||||||   |||| |||||||||| ||||||||||          |||||| ||||||||    
T  38198861 ag-caaagtaggtcctcgctgttaattgttgttgattgagcaaacga--aagcgcacgtggatgtcacatctgactttttttt--gttggg-ttaaatat 38198954  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||| | ||||||||||||||||||||||||||||| ||| ||    
T  38198955 gtttttagtccctataaaattga-ggcatttt-aagttta-gttcttacttaattttaata-gttgttttagtccttacaaaaatactatgcattcaata 38199050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 46043365 - 46043654
Alignment:
Q  552 agggttaattaggttttacgt-cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| || |||||||||| ||||||||||||||||||||| ||  ||||| |||||||||||||| |||| ||||       |  |    
T  46043365 agggttaattatgttttaggttcctataaatatgcgcgtttccaacattagtccctacttaaattttattaaatttttggtccccaacgttttt--ccgt 46043462  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| ||||||||||   | | ||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||           ||   ||||||||    
T  46043463 tag-caaaataggtcatcgctgttaactgttgttgattgagcaaacggtaaagcacacatggatgccacatctgactct--------tttttgttaaata 46043553  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||| |   | |||||||||||||||||||||||||| |||||| |    
T  46043554 tgtttttagtccctataaaattga-ggcatttt-aagttta-gtccttacttaatttttaatcgttgttttagtccttacaaaaatactatacactcaat 46043650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 673 - 853
Target Start/End: Original strand, 44166963 - 44167132
Alignment:
Q  673 taattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattg 772  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||||            ||  ||||||||||||||||||||||| ||||||||    
T  44166963 taattgttgttgattgagcaaacagtgaagcacacatggatgccacatctgattttt-------ttttggttaaatatgtttttagtccctgtaaaattg 44167055  T
Q  773 agggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  44167056 agg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcattcagtatta 44167132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 653 - 853
Target Start/End: Original strand, 45957906 - 45958096
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    ||||||||||| | | | ||||||||||||| |||||||||||  |||| ||||| |||||||||||||||||           ||  ||||||||||||    
T  45957906 gcaaaataggtcctcgctgttaattgttgcttattgagcaaacattgaaccacacatggatgccacatctgacttttt------ttttggttaaatatgt 45957999  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||| ||||||||||| |||||||| |||||| | ||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  45958000 ttttagtccctgtaaaattgagg-cattttaa-gtttag-tgcttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcaatatt 45958095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 43083145 - 43083318
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||          |||||  ||||||||||||||| ||||||||||||    
T  43083145 gttaattgttgctgattgaacaaacggtgaagcacacgtggataccacatctgactttttt----gttgga-ttaaatatgtttttaatccctataaaat 43083239  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| | |||||| ||||||| |||||||||||||||||||| | |||||||  ||||||||||||||||| |||||| |||||    
T  43083240 tga-gacatttt-aagttta-gtccttacttaattttaata-gttgttttaacccttacaaaaatactatacactcactatta 43083318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 552 - 853
Target Start/End: Complemental strand, 46044891 - 46044596
Alignment:
Q  552 agggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| || || ||||||| ||| |||| |||||||||||| ||  ||||| ||||||||||||||||||| || |       |  |    
T  46044891 agggttaattatgttttaggttcttataaataagcgtgttttcaacattagtccctacttaaattttattaaatttttgatccctaatgtttttttccgt 46044792  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    || ||||||||| | | |   |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||          |||  | |||||||    
T  46044791 ta-gcaaaatagatcctcgtggttaattgttgctgattgagcaaacggtgaagcacatgtggatgccacatctaac--ttttttttgtt-agattaaata 46044696  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    |||||||||||||||||||||||| || ||||| ||||||| |||||||||||||||||||| | ||||| |||||||| |||||||  |||||||||||    
T  46044695 tgtttttagtccctataaaattga-ggtatttt-aagttta-gtccttacttaattttaata-gttgtttcagtccttataaaaatatcatgcactcagt 46044600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 740 - 853
Target Start/End: Complemental strand, 3496596 - 3496487
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    |||||||||||||||||||||||||||||||||| || |||||||  |||  |||||||||||||||||||| | |||||||||||||||||||||||||    
T  3496596 gggttaaatatgtttttagtccctataaaattga-ggtattttaagtttt--gtccttacttaattttaata-gttgttttagtccttacaaaaatacta 3496501  T
Q  840 tgcactcagtatta 853  Q
    |||||| |||||||    
T  3496500 tgcactaagtatta 3496487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 553 - 853
Target Start/End: Complemental strand, 43084434 - 43084146
Alignment:
Q  553 gggttaattaggttttacgtc-ctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaa-cgnnnnnnncaatt 650  Q
    |||||||||| |||||| ||| ||||||||||||| ||||||||||||||| | ||  ||||| |||||||||||||| ||||   ||       |  ||    
T  43084434 gggttaattatgttttaggtctctataaataggcgtgtttccaacattagttcctacttaaattttattaaatttttggtccccgtcgtttttttccgtt 43084335  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || |||||||||| | | | ||||||||||| ||||||| |||||||  ||||| ||||||||||||||||||||          |||||| ||||||||    
T  43084334 ag-caaaataggtcctcgctgttaattgttgttgattgaacaaacgg--aagcatacgtggatgccacatctgactttttttt--gttggg-ttaaatat 43084241  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||||| ||||||||| |||||||| ||||||||     | ||||||||||||| | ||||||||||||||||||||||||||||| ||| ||    
T  43084240 gtttttagtccctgtaaaattga-ggcatttt-aagtttag-----tccttaattttaata-gttgttttagtccttacaaaaatactatgcattcaata 43084149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 3495476 - 3495647
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||||||||||||||||||||  |||||||| | |||||||||||||||          |||||| ||||||||||||  ||| ||||||||||    
T  3495476 gttaattgttgctgattgagcaaacgg--aagcacacctagatgccacatctgactttttttt--gttggg-ttaaatatgttt--agttcctataaaat 3495568  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| ||||||||| ||   |||||||||||||||||||||  |||||||||||||||||||||| |||||| ||| |||||    
T  3495569 tgagg-cattttaaactta--gtccttacttaattttaatagt-tgttttagtccttacaaaaataatatgcattcaatatta 3495647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 581 - 725
Target Start/End: Complemental strand, 44168348 - 44168205
Alignment:
Q  581 taggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacgnnnnnnncaattaggcaaaataggttcccaccgttaattgtt 680  Q
    |||| |||||| |||||||||||| ||  ||||| |||||||||||||||||||||||       |  || |||||||||||| | | |  |||||||||    
T  44168348 taggtgcgttttcaacattagtccctacttaaattttattaaatttttgatcccaacgtttttttccgtt-ggcaaaataggtcctcgctattaattgtt 44168250  T
Q  681 gctgattgagcaaacggtgaagcacacgtggatgccacatctgac 725  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||    
T  44168249 gctgattgagcaaacggtgaagcacacatgaatgtcacatctgac 44168205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 671 - 725
Target Start/End: Original strand, 15130560 - 15130612
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgac 725  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  15130560 gttaattgttgctgattgagcaaacggtgaag--cacgtggatgccacatctgac 15130612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 740 - 834
Target Start/End: Complemental strand, 47792266 - 47792176
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||||||||| |||||||||||||||  || | ||  |||||||| ||||||||||||||||||||| | ||||||||||||||||||    
T  47792266 gggttaaatatgtttttggtccctataaaattg--ggaacttctaagtttag-tccttacttaattttaatagg-ttttttagtccttacaaaaa 47792176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 792 - 853
Target Start/End: Original strand, 15130642 - 15130702
Alignment:
Q  792 gtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||    
T  15130642 gtccgtacttaattttaatagt-tgttttagtccttacaaaaataccatgcacccagtatta 15130702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 573 - 634
Target Start/End: Original strand, 43830672 - 43830733
Alignment:
Q  573 cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    |||||||||||| |||||| |||||||||||| ||  ||||| |||||||||||||||||||    
T  43830672 cctataaataggtgcgttttcaacattagtccctacttaaattttattaaatttttgatccc 43830733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 552 - 628
Target Start/End: Complemental strand, 43832046 - 43831969
Alignment:
Q  552 agggttaattaggttttacgtc-ctataaataggcgcgtttccaacattagtccatatctaaatgttattaaattttt 628  Q
    ||||||||||| |||| | ||| |||||||||||||||||| |||||||||||| ||  ||||| |||||||||||||    
T  43832046 agggttaattatgtttaaggtctctataaataggcgcgttttcaacattagtccctacttaaattttattaaattttt 43831969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 6588569 - 6588638
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||||||||||||||||||| || | |||| ||||||| || ||||||||||||||||||    
T  6588569 gggttaaatatgtttttagtccctataaaattg-ggacctttt-aagttta-gttcttacttaattttaatag 6588638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 556 - 634
Target Start/End: Original strand, 33624487 - 33624566
Alignment:
Q  556 ttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||| |||||| |||| |||||||||||||||||  ||||||||| | ||  ||||| |||||||||||||||||||    
T  33624487 ttaattatgttttaggtccctataaataggcgcgtttttaacattagttcctacttaaattttattaaatttttgatccc 33624566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 747 - 847
Target Start/End: Complemental strand, 38595400 - 38595304
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatg-ttttagtccttacaaaaatactatgcact 845  Q
    |||||||||| ||||||||||||||  ||| ||||| ||||||| |||||||||||||||||||||  || ||||||||| || ||||| | ||||||||    
T  38595400 atatgtttttggtccctataaaatt--gggaatttttaagttta-gtccttacttaattttaatag--tgcttttagtccatataaaaaaattatgcact 38595306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 834
Target Start/End: Complemental strand, 38159371 - 38159282
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    |||||||||||||||| |||||||||||||  ||||  |||| |||||||  |||||||||||||||||||  ||  |||||||||||||||||    
T  38159371 ggttaaatatgtttttggtccctataaaat--agggatttttcaagttta-atccttacttaattttaataaaat-atttagtccttacaaaaa 38159282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 685 - 722
Target Start/End: Complemental strand, 3496646 - 3496609
Alignment:
Q  685 attgagcaaacggtgaagcacacgtggatgccacatct 722  Q
    |||||||||||||||||||||||||||||| |||||||    
T  3496646 attgagcaaacggtgaagcacacgtggatgtcacatct 3496609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 573 - 638
Target Start/End: Complemental strand, 43309691 - 43309626
Alignment:
Q  573 cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaacg 638  Q
    |||||||||||||| |||| |||||||| ||  ||  ||||| |||||||||||||||||||||||    
T  43309691 cctataaataggcgtgttttcaacattaatctctacttaaattttattaaatttttgatcccaacg 43309626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 629
Target Start/End: Original strand, 45957805 - 45957882
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttg 629  Q
    |||||||||| |||||| |||| |||||||||||| |||| ||||||||| || ||  ||||| ||||||||||||||    
T  45957805 gggttaattatgttttaggtccctataaataggcgtgttttcaacattagcccctacttaaattttattaaatttttg 45957882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 21109761 - 21109692
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||||||||||||||| | |||||||| || | |||| ||||||| |||||||||||||||||||||    
T  21109761 gggttaaatatgtttttagtccttgtaaaattg-ggacctttt-aagttta-gtccttacttaattttaatag 21109692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 35482469 - 35482400
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||| |||||||||||||| |||  |||||||| |||| ||| |||||||||||||||||    
T  35482469 gggttaaatatgtttttggtccctataaaatt-aggatattttaaa-ttta-gtcattacttaattttaatag 35482400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 810
Target Start/End: Original strand, 38158831 - 38158898
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaat 810  Q
    ||||||||||||||||| |||||||||||||  ||||   ||| ||||||| |||||||||||||||||||    
T  38158831 gggttaaatatgtttttggtccctataaaat--aggggcctttcaagttta-gtccttacttaattttaat 38158898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 629
Target Start/End: Original strand, 43083029 - 43083104
Alignment:
Q  554 ggttaattaggttttacgtcctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttg 629  Q
    ||||||||| |||||| ||||||||||||| || ||||  ||||||||||  ||  ||||| ||||||||||||||    
T  43083029 ggttaattatgttttaggtcctataaatagacgtgtttttaacattagtctctacttaaattttattaaatttttg 43083104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 740 - 774
Target Start/End: Original strand, 43574121 - 43574155
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgag 774  Q
    ||||||||||||||||||||||||||||| |||||    
T  43574121 gggttaaatatgtttttagtccctataaagttgag 43574155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 740 - 774
Target Start/End: Original strand, 44080840 - 44080874
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgag 774  Q
    |||||||||||||||||| ||||||||||||||||    
T  44080840 gggttaaatatgtttttaatccctataaaattgag 44080874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 747 - 812
Target Start/End: Original strand, 8832597 - 8832659
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||| ||||||||||||||| || | |||| ||||||| |||||||||||||||||||||    
T  8832597 atatgtttttggtccctataaaattg-ggacctttt-aagttta-gtccttacttaattttaatag 8832659  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 629
Target Start/End: Complemental strand, 15131925 - 15131848
Alignment:
Q  553 gggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttg 629  Q
    |||||||||| |||||| ||||| |||||| |||| |||| |||||||||| | ||  ||||| ||||||||||||||    
T  15131925 gggttaattatgttttaggtccttataaatcggcgtgttttcaacattagttcctacttaaattttattaaatttttg 15131848  T

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Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 793 - 834
Target Start/End: Original strand, 22378383 - 22378423
Alignment:
Q  793 tccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  22378383 tccttacttaattttaata-gattttttagtccttacaaaaa 22378423  T

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Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 22378871 - 22378803
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||| ||||||||||||| |||| |  ||| |||||||  ||||||||||||||||||||    
T  22378871 gggttaaatatgttttt-gtccctataaaatagaggtc--tttcaagtttaa-tccttacttaattttaatag 22378803  T

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Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 741 - 774
Target Start/End: Complemental strand, 29156378 - 29156345
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgag 774  Q
    ||||||||||||||| ||||||||||||||||||    
T  29156378 ggttaaatatgttttaagtccctataaaattgag 29156345  T

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Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 636
Target Start/End: Complemental strand, 38200166 - 38200081
Alignment:
Q  552 agggttaattaggttttacgtcct-ataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaa 636  Q
    ||||||||||| |||||| ||||| |||||| ||| | ||| |||||||||||  ||  ||||| |||||||||||||| ||||||    
T  38200166 agggttaattatgttttaagtccttataaatgggctcattttcaacattagtcattacttaaattttattaaatttttggtcccaa 38200081  T

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Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 800 - 853
Target Start/End: Complemental strand, 44168135 - 44168083
Alignment:
Q  800 ttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||||||||||||  |||||||||||||| ||||||  ||||||||||||||||    
T  44168135 ttaattttaatagt-tgttttagtccttagaaaaatgttatgcactcagtatta 44168083  T

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Target: scaffold0097 (Bit Score: 97; Significance: 3e-47; HSPs: 5)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 573 - 853
Target Start/End: Complemental strand, 23450 - 23173
Alignment:
Q  573 cctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnn---caattaggcaaaataggttccca 668  Q
    |||||||||||||||||||||||||||||||| ||  ||||| |||||| |||||||||||| ||||          |  |||| |||||||| | | |     
T  23450 cctataaataggcgcgtttccaacattagtccctacttaaattttattacatttttgatccccaacgttttttttttccgttag-caaaatagatcctcg 23352  T
Q  669 ccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaa 768  Q
    | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||           |  |||||||||||||||||||||||||||||    
T  23351 ctgttaattgttgttgattgagcaaacggtgaagcacacgtggacgccacatctgactttttttttatt--gggttaaatatgtttttagtccctataaa 23254  T
Q  769 attgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  23253 attgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagtatta 23173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 671 - 843
Target Start/End: Complemental strand, 25522 - 25359
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||          |||||| |||||||||||||||| |||||||||||    
T  25522 gttaattgttgctgattgagcaaacag--aagcacacgtggatgccacatctgactttttttt--gttggg-ttaaatatgtttttagcccctataaaat 25428  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgca 843  Q
    ||| |||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  25427 tga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatactatgca 25359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 23604 - 23778
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||| | ||||| |||| | ||||||||||||||||||||||||||||          |||| | ||||||||||||||||||||| ||||||    
T  23604 gttaattgttgttaattgaacaaatgatgaagcacacgtggatgccacatctgacttttttt---gttgag-ttaaatatgtttttagtccctttaaaat 23699  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| |||||||| |||||  ||||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||||||    
T  23700 tgagg-cattttaa-gtttaa-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgaacttagtatta 23778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 653 - 853
Target Start/End: Complemental strand, 24881 - 24692
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    ||||||||||| | | | ||||||||||||||||||||||| | ||||| ||||| |||||| ||||||||||           ||  ||||||||||||    
T  24881 gcaaaataggtcctcgctgttaattgttgctgattgagcaaccagtgaatcacacatggatgtcacatctgactatttt-----ttttggttaaatatgt 24787  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||| |||||||||  ||||||| ||||||| ||||||| |||||||||||| | |||||||||||||||  ||||||||  |||||||||||    
T  24786 ttttagtccctgtaaaattga-agcatttt-aagttta-gtccttatttaattttaata-gttgttttagtccttac--aaatactagtcactcagtatt 24693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 553 - 634
Target Start/End: Complemental strand, 25646 - 25564
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    |||||||||| |||||| |||| ||||||||||||||||| |||||||||||||||  ||||| |||||||||||||| ||||    
T  25646 gggttaattatgttttaggtccctataaataggcgcgttttcaacattagtccatacttaaattttattaaatttttggtccc 25564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 2e-42; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 22971591 - 22971887
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnn-caa 648  Q
    ||||||||||| ||||||  ||| |||||||||||||||||||||||| ||||| ||  ||||| ||||||||||||| ||||| ||||        |      
T  22971591 agggttaattatgttttagatccctataaataggcgcgtttccaacatcagtccctacttaaattttattaaattttttatccccaacgttttatttccg 22971690  T
Q  649 ttaggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaat 748  Q
    |||| ||||||||||   |   ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||          |||||| ||||||    
T  22971691 ttag-caaaataggtcatcgttgttaattgttgctgattgagcaaacagtgaagcacacgtggatgccacatatgactttttttt--gttggg-ttaaat 22971786  T
Q  749 atgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcag 848  Q
    ||||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  22971787 atgtttttagttcctataaaattgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagttcttacaaaaatactatgcactcag 22971882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 552 - 853
Target Start/End: Complemental strand, 23816807 - 23816511
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnn-caa 648  Q
    ||||||||||| ||||||  ||| |||||||||||||||||||||||| ||||| ||  ||||| ||||||||||||| ||||| ||||        |      
T  23816807 agggttaattatgttttagatccctataaataggcgcgtttccaacatcagtccctacttaaattttattaaattttttatccccaacgttttatttccg 23816708  T
Q  649 ttaggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaat 748  Q
    |||| ||||||||||   |   ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||          |||||| ||||||    
T  23816707 ttag-caaaataggtcatcgttgttaattgttgctgattgagcaaacagtgaagcacacgtggatgccacatatgactttttttt--gttggg-ttaaat 23816612  T
Q  749 atgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcag 848  Q
    ||||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  23816611 atgtttttagttcctataaaattgagg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagttcttacaaaaatactatgcactcag 23816516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 553 - 853
Target Start/End: Complemental strand, 17246677 - 17246385
Alignment:
Q  553 gggttaattaggttttacgtc-ctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaatt 650  Q
    |||||||||| |||||| ||| ||||||||||||| ||||| |||| |||||| ||  ||||| |||||||||||||| |||| ||||       || ||    
T  17246677 gggttaattatgttttaggtctctataaataggcgtgtttctaacaatagtccctacttaaattttattaaatttttggtccccaacgttatttcca-tt 17246579  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatat 750  Q
    || | |||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||          |||||  ||||||||    
T  17246578 ag-cgaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctaacttttttt---gttgga-ttaaatat 17246484  T
Q  751 gtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagta 850  Q
    ||||||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||| | || ||||||||||||||||||| ||||||||| |||    
T  17246483 gtttttagtccctataaaattga-ggcatttt-aagttta-gttcttacttaattttaata-gttgctttagtccttacaaaaatattatgcactcggta 17246388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 555 - 853
Target Start/End: Complemental strand, 5080101 - 5079811
Alignment:
Q  555 gttaattaggttttacgtcctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgat-cccaacgnnnnnnncaattagg 653  Q
    |||||||| |||||| |||||||||||||  | |||||||| |||||| | ||| ||||| |||||||||||||| | ||| |||          ||| |    
T  5080101 gttaattatgttttaggtcctataaatagatgtgtttccaatattagttcctatttaaattttattaaatttttggtccccgacgttttttttcgtta-g 5080003  T
Q  654 caaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtt 753  Q
    ||||||| || | | | |||||||||||||||||||||||||||||||||||||||||||||| |||||||           ||| ||||||||||||||    
T  5080002 caaaataagtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccccatctga---ttttttttgtt-gggttaaatatgtt 5079907  T
Q  754 tttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||||||||| ||||||||| |||||||| |||||||  ||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||    
T  5079906 tttagtccctgtaaaattga-ggcatttt-aagttta-atccttacttaattttaata-gttgttttagtccttacaaaaatactatgcacttagtatta 5079811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 672 - 853
Target Start/End: Complemental strand, 18503455 - 18503283
Alignment:
Q  672 ttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaatt 771  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||||    
T  18503455 ttaattgttgctgattgagaaaacgg--aagcacacgtggatgccacatctgactctttttt--gttggg-ttaaatatgtttttagtccctataaaatt 18503361  T
Q  772 gagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    || |||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| |||||    
T  18503360 ga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtccttacaaaaatactatgcattcaatatta 18503283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 572 - 853
Target Start/End: Complemental strand, 3335744 - 3335471
Alignment:
Q  572 tcctataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaattaggcaaaataggttcccacc 670  Q
    ||||||||||||||| ||||||||||||| ||| ||  ||||| |||||||||||| |||||| ||||       |  |||| |||||||||| |   |     
T  3335744 tcctataaataggcgtgtttccaacattactccctacataaattttattaaatttt-gatccccaacgtttttttccgttag-caaaataggtccttgct 3335647  T
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||           |||| | ||||||||||||||||||||||||||||    
T  3335646 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgtcacatctga--tttttttttgttgtg-ttaaatatgtttttagtccctataaaat 3335550  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
     || | |||||| ||||||| |||||||||||||||||||| | ||||||| |||| |||||||||||||||| |||||||||    
T  3335549 cga-gacatttt-aagttta-gtccttacttaattttaata-gttgttttaatcctcacaaaaatactatgcattcagtatta 3335471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 653 - 853
Target Start/End: Original strand, 5078796 - 5078989
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    |||||||||||   ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||          |||||| ||||||||||    
T  5078796 gcaaaataggtcatcactgttaattgttgctgattgagcaaactttgaagcacacgtggatgccacatctgactttttttt--gttggg-ttaaatatgt 5078892  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    |||||||||||||||||| ||  ||||||| ||||||| |||| ||||||||||||||| | ||||||||| |||| |||||||||||| | ||||||||    
T  5078893 ttttagtccctataaaatcga-agcatttt-aagttta-gtccatacttaattttaata-gttgttttagtacttataaaaatactatgtattcagtatt 5078988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 653 - 853
Target Start/End: Original strand, 8231002 - 8231195
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    |||||||||||   ||| ||||||||||| |||||||||||| | |||||||||| |||||||||||||||||          ||| || ||||||||||    
T  8231002 gcaaaataggtcttcactgttaattgttgttgattgagcaaatgatgaagcacacatggatgccacatctgactttttttt--gtttgg-ttaaatatgt 8231098  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||| | |||||||||||||||||||||| |||| |||| |||||    
T  8231099 ttttagtccctataaaattga-ggcatttt-aagttta-gtccttactttattttaata-gttgttttagtccttacaaaaataatatggactcggtatt 8231194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 22972264 - 22972092
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||| |||||||| ||| |||||||||||| || ||||||||||||||           ||  ||||| ||||||||||||||||  ||||||    
T  22972264 gttaattgttgttgattgagaaaatggtgaagcacacatgaatgccacatctgacttttt------ttttggttatatatgtttttagtccccgtaaaat 22972171  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| ||||||||  |||  |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  22972170 tgagg-cattttaa--ttttagtccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcggtatta 22972092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 23816134 - 23816306
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||| |||||||| ||| |||||||||||| || ||||||||||||||           ||  ||||| ||||||||||||||||  ||||||    
T  23816134 gttaattgttgttgattgagaaaatggtgaagcacacatgaatgccacatctgacttttt------ttttggttatatatgtttttagtccccgtaaaat 23816227  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||||| ||||||||  |||  |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  23816228 tgagg-cattttaa--ttttagtccttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcggtatta 23816306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 740 - 843
Target Start/End: Original strand, 17244422 - 17244521
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    ||||| |||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||||||| | |||||||||| ||||||||||||||    
T  17244422 gggttcaatatgtttttagtccttataaaattga-ggcatttt-aagttta-gtccttacttaattttaata-gttgttttagtcgttacaaaaatacta 17244517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 552 - 634
Target Start/End: Complemental strand, 7855486 - 7855403
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||||||| |||||| |||| |||||||||||| |||| |||||||||||| ||  ||||| |||||||||||||| ||||    
T  7855486 agggttaattatgttttaagtccctataaataggcgtgttttcaacattagtccctacttaaattttattaaatttttggtccc 7855403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 861773 - 861704
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||||||||||||||||||| |  |  ||| ||||||| |||||||||||||||||||||    
T  861773 gggttaaatatgtttttagtccctataaaattgtgacc--ttttaagttta-gtccttacttaattttaatag 861704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 30492604 - 30492673
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||| ||||||||||||||  |||  |||| ||||||| |||||||||||||||||||||    
T  30492604 gggttaaatatgtttttggtccctataaaatt--gggactttttaagttta-gtccttacttaattttaatag 30492673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 636
Target Start/End: Original strand, 7852247 - 7852331
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatcccaa 636  Q
    |||||||||| |||||| |||| |||||||||||| |||| |||||||| ||| ||  ||||| |||||||||||||| ||||||    
T  7852247 gggttaattatgttttaggtccctataaataggcgtgttttcaacattaatccctacttaaattttattaaatttttggtcccaa 7852331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 740 - 835
Target Start/End: Original strand, 17697264 - 17697355
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaat 835  Q
    ||||||||||||||||| ||||||||||||||||  | | ||| ||||||| |||||| ||||||||||||||| | ||||||||| || ||||||    
T  17697264 gggttaaatatgtttttggtccctataaaattga--gaacttttaagttta-gtccttgcttaattttaatagg-ttttttagtccctaaaaaaat 17697355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 740 - 834
Target Start/End: Original strand, 5974183 - 5974273
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||||||||| ||||||||||||||||  | | ||  ||||||| || ||||||||||||||||||| | ||||||||| ||||||||    
T  5974183 gggttaaatatgtttttggtccctataaaattga--gaacttctaagttta-gttcttacttaattttaatagg-ttttttagtccgtacaaaaa 5974273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 552 - 634
Target Start/End: Complemental strand, 15119438 - 15119355
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||||||| |||| | |||| |||||||||| | ||||||||||||||||| ||  ||||| |||||||||||||| ||||    
T  15119438 agggttaattatgtttaaggtccctataaataggtgtgtttccaacattagtccctacttaaattttattaaatttttggtccc 15119355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 743 - 834
Target Start/End: Complemental strand, 18804198 - 18804110
Alignment:
Q  743 ttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    |||||||||||||| |||||||||||||||| |  ||||| ||||||| |||||||||||||||||||||  | ||||||||| || |||||    
T  18804198 ttaaatatgtttttggtccctataaaattga-gatatttt-aagttta-gtccttacttaattttaatagttttttttagtccctaaaaaaa 18804110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 743 - 812
Target Start/End: Original strand, 861235 - 861301
Alignment:
Q  743 ttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||| ||||||||||||  |||| | ||| ||||||| |||||||||||||||||||||    
T  861235 ttaaatatgtttttaatccctataaaat--agggaacttttaagttta-gtccttacttaattttaatag 861301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 740 - 853
Target Start/End: Original strand, 2087321 - 2087429
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    ||||||||||| ||||| ||||||||||||||| |  |  ||| |||||||| ||||||||||||||||||| | | ||||||||| || ||||| | ||    
T  2087321 gggttaaatatatttttggtccctataaaattgggacc--tttcaagtttag-tccttacttaattttaata-gttcttttagtcccta-aaaaaaatta 2087415  T
Q  840 tgcactcagtatta 853  Q
    ||||||||||||||    
T  2087416 tgcactcagtatta 2087429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 740 - 774
Target Start/End: Complemental strand, 20898393 - 20898359
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgag 774  Q
    |||||||||||||||||||||||||||||||||||    
T  20898393 gggttaaatatgtttttagtccctataaaattgag 20898359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 939256 - 939187
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||||||||||||| |||| |||||||||||  | | ||| ||||||| |||||||||||||||||||||    
T  939256 gggttaaatatgtttttggtccatataaaattga--gaacttttaagttta-gtccttacttaattttaatag 939187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 14256558 - 14256489
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    ||||||| ||||||||| ||||||||||||||||  ||  ||| ||||||| |||||||||||||||||||||    
T  14256558 gggttaattatgtttttggtccctataaaattgaaagc--ttttaagttta-gtccttacttaattttaatag 14256489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 854
Target Start/End: Complemental strand, 15721478 - 15721368
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    |||| |||||||||||| |||||||||||||  ||||   ||| ||||||| ||||||||||||||||||| || | ||||||||| || || || | |     
T  15721478 gggtaaaatatgtttttggtccctataaaat--aggggtctttcaagttta-gtccttacttaattttaat-ggtttttttagtccctaaaagaaaattc 15721383  T
Q  840 tgcactcagtattaa 854  Q
    |||||||||||||||    
T  15721382 tgcactcagtattaa 15721368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 740 - 770
Target Start/End: Original strand, 6197806 - 6197836
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||||||||||||||||||||||||    
T  6197806 gggttaaatatgtttttagtccctataaaat 6197836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 740 - 853
Target Start/End: Complemental strand, 11400482 - 11400373
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    |||||||||||||||||  | |||||||||||  |  |  ||| |||||||| ||||||||||||||||||||  | ||||||||| || ||||| | ||    
T  11400482 gggttaaatatgttttttattcctataaaatttggatc--tttcaagtttag-tccttacttaattttaatagt-tattttagtccctataaaaaaatta 11400387  T
Q  840 tgcactcagtatta 853  Q
    ||||||||||||||    
T  11400386 tgcactcagtatta 11400373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 747 - 847
Target Start/End: Original strand, 3913148 - 3913244
Alignment:
Q  747 atatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactc 846  Q
    |||||||||| ||||||||||||||| |  | |||  |||||||| ||||||||||||||||||||  | ||||||||| || ||||| | |||||||||    
T  3913148 atatgtttttggtccctataaaattgggatctttt--aagtttag-tccttacttaattttaatagtgt-ttttagtccatataaaaaaattatgcactc 3913243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 793 - 834
Target Start/End: Original strand, 22731922 - 22731962
Alignment:
Q  793 tccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  22731922 tccttacttaattttaatagg-ttttttagtccttacaaaaa 22731962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 740 - 813
Target Start/End: Complemental strand, 22732410 - 22732341
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatagg 813  Q
    ||||||||||||||||| ||||||| ||||||| || | |||||| |||||| |||||||||||||||||||||    
T  22732410 gggttaaatatgttttt-gtccctacaaaattg-ggaccttttaa-gtttag-tccttacttaattttaatagg 22732341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 811
Target Start/End: Original strand, 30660664 - 30660729
Alignment:
Q  743 ttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaata 811  Q
    |||||||||||||| ||||||||||||||||  |  |||| ||||||| |||||| |||||||||||||    
T  30660664 ttaaatatgtttttggtccctataaaattga--gactttttaagttta-gtccttgcttaattttaata 30660729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 575 - 853
Target Start/End: Complemental strand, 7437 - 7167
Alignment:
Q  575 tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatc-ccaacgnnnnnnncaattaggcaaaataggttcccaccgtt 673  Q
    |||||||||| ||||||||||||||||||| ||  ||||| ||||||||||||| ||| ||||         |  ||| | ||||||||| | | | |||    
T  7437 tataaataggtgcgtttccaacattagtccctacttaaattttattaaattttttatctccaatttatttttccgtta-gtaaaataggtcctcgctgtt 7339  T
Q  674 aattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaattga 773  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||          ||| |||||||||||||||||||| |||||||||||||    
T  7338 aattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctaac--ttttttttgtt-gggttaaatatgtttttagt-cctataaaattga 7243  T
Q  774 gggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
     |||||||| ||||||| ||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||    
T  7242 -ggcatttt-aagttta-gtccttacttaattttaata-attgttttagtccttacaaaaataccatgcactcagtatta 7167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 552 - 853
Target Start/End: Original strand, 5518 - 5810
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||||||||||||||| ||||||||||| ||  ||||| |||||||||||||| |||| ||||       | ||    
T  5518 agggttaattatgttttaggtccctataaataggcgcgtttctaacattagtccctacttaaattttattaaatttttggtccccaacgtttttttccat 5617  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| ||||||||||   | | ||||||||||| |||||||||||||   ||||||||| |||||||||||||||||          |||||  |||||||    
T  5618 tag-caaaataggtcatcgctgttaattgttgttgattgagcaaacaacgaagcacacatggatgccacatctgactttttt----gttgg--ttaaata 5710  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagt 849  Q
    ||||||||||||||| |||||||| |||||||| ||||||| |||||||||||||| ||||  | |||||| |||||||||||||||||||||||| |||    
T  5711 tgtttttagtccctaaaaaattga-ggcatttt-aagttta-gtccttacttaattctaat-cgttgtttttgtccttacaaaaatactatgcacttagt 5806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 83; Significance: 7e-39; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 552 - 843
Target Start/End: Complemental strand, 49353 - 49071
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatc-ccaacgnnnnnnncaat 649  Q
    ||||||||||| |||||| |||| |||||||||||| ||||||||||||||||| ||  ||||| |||||||||||||| || || |||       |  |    
T  49353 agggttaattatgttttaggtccctataaataggcgtgtttccaacattagtccctacttaaattttattaaatttttggtctccgacgtttttttccgt 49254  T
Q  650 taggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaata 749  Q
    ||| ||||||| || | | | |||||||||||||||||||||||||||  ||||||||||||||||||||||||||          |||||| |||||||    
T  49253 tag-caaaataagtcctcgctgttaattgttgctgattgagcaaacgg--aagcacacgtggatgccacatctgactttttttt--gttggg-ttaaata 49160  T
Q  750 tgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgca 843  Q
    |||||| ||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  49159 tgtttt-agtccctataaaattgacg-cattttaa-gtttag-tccttacttaattttaatagt-tgttttagtccttacaaaaatactatgca 49071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 654 - 853
Target Start/End: Original strand, 35075 - 35266
Alignment:
Q  654 caaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtt 753  Q
    |||||||||| | | | ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||          | |    |||||||||||    
T  35075 caaaataggtcctcgctgttaattgttgctgattgaacaaacagtgaagcacacgtggatgccacatctgactttttttgttgat----ttaaatatgtt 35170  T
Q  754 tttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||| ||||||||||||||||| |||||||| |||||| || |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  35171 tttaatccctataaaattgagg-cattttaa-gtttagttc-ttacttaattttaatagt-tgttttagtccttacaaaaatactatgcactcagtatta 35266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 653 - 853
Target Start/End: Complemental strand, 38875 - 38683
Alignment:
Q  653 gcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgt 752  Q
    ||||||||||| | | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||    
T  38875 gcaaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttt---gttggg-ttaaatatgt 38780  T
Q  753 ttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatt 852  Q
    |||||||||||||||||| || |||||||| ||||||| ||| ||| |||||||||||| | |||||||||||| ||||||||| |||||| ||||||||    
T  38779 ttttagtccctataaaatcga-ggcatttt-aagttta-gtcattatttaattttaata-gttgttttagtcctcacaaaaatattatgcattcagtatt 38684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 71; Significance: 1e-31; HSPs: 2)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 671 - 853
Target Start/End: Original strand, 9244 - 9415
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||          ||| |||||||||||||||||||||||||||||||    
T  9244 gttaattgttgttgattgagcaaatggtgaagcacacgtggatgtcacatctgac---tttttttgtt-gggttaaatatgtttttagtccctataaaat 9339  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| || ||||| |||||||  ||||||||||||| ||    | |||||||||||||||||||||||||||||||||||||||    
T  9340 tga-ggtatttt-aagttta-atccttacttaattata----gttgttttagtccttacaaaaatactatgcactcagtatta 9415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 10427 - 10254
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||          |||||| ||||||||||||||||||||||||||||    
T  10427 gttaattgttgctgattgagcaaacgg--aagcacatgtggatgccacatctgactttttttt--gttggg-ttaaatatgtttttagtccctataaaat 10333  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| | |||||| ||||||| || ||||||||||||||||| | |||||||||||||||||||| |||||||| ||| |||||    
T  10332 tga-gtcatttt-aagttta-gttcttacttaattttaata-gttgttttagtccttacaaaaacactatgcattcaatatta 10254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 4e-31; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 553 - 725
Target Start/End: Original strand, 239206 - 239379
Alignment:
Q  553 gggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc-aacgnnnnnnncaatt 650  Q
    |||||||||| |||||| |||| |||||||||| ||||||||||||||||||| || |||||| ||||| |||||||| |||| ||||       |  ||    
T  239206 gggttaattatgttttaggtccctataaataggtgcgtttccaacattagtccctacctaaattttattcaatttttggtccccaacgtttttttccgtt 239305  T
Q  651 aggcaaaataggttcccaccgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgac 725  Q
    || |||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  239306 ag-caaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacgtctgac 239379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 671 - 853
Target Start/End: Complemental strand, 240476 - 240303
Alignment:
Q  671 gttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacnnnnnnnnnngttggggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||          ||||   ||||||||||||||||||||||||||||    
T  240476 gttaattgttgctgattgagcaaacag--aagcacacgtggatgtcacatctgactttttttt--gttgca-ttaaatatgtttttagtccctataaaat 240382  T
Q  771 tgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    ||| |||||||| ||||||| || ||||||||||||||||| | ||||||||||||||||||||||||||||| ||| |||||    
T  240381 tga-ggcatttt-aagttta-gttcttacttaattttaata-gttgttttagtccttacaaaaatactatgcattcaatatta 240303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 792 - 853
Target Start/End: Original strand, 239423 - 239483
Alignment:
Q  792 gtccttacttaattttaataggatgttttagtccttacaaaaatactatgcactcagtatta 853  Q
    |||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  239423 gtccttacttaattttaatagt-tgttttagtccttacaaaaatattatgcactcagtatta 239483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 67; Significance: 3e-29; HSPs: 2)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 740 - 853
Target Start/End: Complemental strand, 137 - 28
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaatacta 839  Q
    |||||||||||||||||||||||||||||||||| || |||||||  |||  |||||||||||||||||||| | |||||||||||||||||||||||||    
T  137 gggttaaatatgtttttagtccctataaaattga-ggtattttaagtttt--gtccttacttaattttaata-gttgttttagtccttacaaaaatacta 42  T
Q  840 tgcactcagtatta 853  Q
    |||||| |||||||    
T  41 tgcactaagtatta 28  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 685 - 722
Target Start/End: Complemental strand, 187 - 150
Alignment:
Q  685 attgagcaaacggtgaagcacacgtggatgccacatct 722  Q
    |||||||||||||||||||||||||||||| |||||||    
T  187 attgagcaaacggtgaagcacacgtggatgtcacatct 150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 21959 - 21890
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||||||||||||||||||||||||||||  |  ||| ||||||| |||||||||||||||||||||    
T  21959 gggttaaatatgtttttagtccctataaaattgagatc--ttttaagttta-gtccttacttaattttaatag 21890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 740 - 774
Target Start/End: Original strand, 21633 - 21667
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgag 774  Q
    ||||||||||||||||| |||||||||||||||||    
T  21633 gggttaaatatgtttttggtccctataaaattgag 21667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 741 - 812
Target Start/End: Complemental strand, 6587 - 6519
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||| |||||||||||||||||||||    
T  6587 ggttaaatatgtttttggtccctataaaattga-gacatttt-aagttta-gtccttacttaattttaatag 6519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 743 - 833
Target Start/End: Original strand, 6059 - 6145
Alignment:
Q  743 ttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaa 833  Q
    |||||||| || || |||||||||||||||  || | ||  |||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  6059 ttaaatatattctttgtccctataaaattg--ggaacttctaagtttag-tccttacttaattttaatagg-ttttttagtccttacaaaa 6145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 740 - 853
Target Start/End: Complemental strand, 17790 - 17680
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaata-ct 838  Q
    |||||||||||||||||||||| |||||||||||| ||  ||| ||||||| ||| |||||||||||||||| | | ||||| ||| |||||||| |  |    
T  17790 gggttaaatatgtttttagtccttataaaattgagagc--ttttaagttta-gtctttacttaattttaata-gttcttttaatccctacaaaaaaagtt 17695  T
Q  839 atgcactcagtatta 853  Q
    |||||||||||||||    
T  17694 atgcactcagtatta 17680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 552 - 634
Target Start/End: Original strand, 282610 - 282693
Alignment:
Q  552 agggttaattaggttttacgtcc-tataaataggcgcgtttccaacattagtccatatctaaatgttattaaatttttgatccc 634  Q
    ||||||||||| |||| | |||| |||||||| ||| |||||||||||| |||| ||| ||||| ||||||||||||| |||||    
T  282610 agggttaattatgtttaaagtccctataaataagcgagtttccaacattggtccctatttaaattttattaaatttttcatccc 282693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 740 - 834
Target Start/End: Complemental strand, 1087 - 998
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaaa 834  Q
    ||||||| ||||||| | |||||||||||||||  |  ||||| |||||||| ||||||||||||||||||||  | ||||||||| ||||||||    
T  1087 gggttaactatgtttctggtccctataaaattg--gaaatttttaagtttag-tccttacttaattttaatag--ttttttagtccctacaaaaa 998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 743 - 833
Target Start/End: Original strand, 80 - 166
Alignment:
Q  743 ttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaataggatgttttagtccttacaaaa 833  Q
    |||||||| ||||| ||| |||||||||||  || | ||  |||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  80 ttaaatatattttttgtcactataaaattg--ggaacttctaagtttag-tccttacttaattttaatagg-ttttttagtccttacaaaa 166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 812
Target Start/End: Complemental strand, 603 - 535
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaatag 812  Q
    |||||||||||||||| |||||||||||||| | | |||||| ||||||| || ||||||||||||||||||    
T  603 ggttaaatatgtttttggtccctataaaattta-gacatttt-aagttta-gttcttacttaattttaatag 535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 771
Target Start/End: Original strand, 16832 - 16863
Alignment:
Q  740 gggttaaatatgtttttagtccctataaaatt 771  Q
    ||||||||||||||||||||||||||||||||    
T  16832 gggttaaatatgtttttagtccctataaaatt 16863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 741 - 770
Target Start/End: Complemental strand, 17095 - 17066
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaat 770  Q
    ||||||||||||||||||||||||||||||    
T  17095 ggttaaatatgtttttagtccctataaaat 17066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 811
Target Start/End: Original strand, 6816 - 6883
Alignment:
Q  741 ggttaaatatgtttttagtccctataaaattgagggcattttaaagtttaggtccttacttaattttaata 811  Q
    |||||||||| ||||||||||||||||||||| || | |||| ||||||| ||||||||||||||| ||||    
T  6816 ggttaaatatatttttagtccctataaaattg-ggacctttt-aagttta-gtccttacttaatttaaata 6883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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