View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5291_high_1 (Length: 819)
Name: NF5291_high_1
Description: NF5291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF5291_high_1 |
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[»] scaffold0160 (1 HSPs) |
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[»] scaffold0143 (1 HSPs) |
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[»] scaffold0016 (1 HSPs) |
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[»] scaffold0045 (2 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 180; Significance: 9e-97; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 39292771 - 39292503
Alignment:
Q |
1 |
ttccatcttcttctaccgtaaatcttgttcgagatctatataactagttgcaatannnnnnnnng-aaatatagttgcaagatatttttgtcaattacta |
99 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| |||| ||||| |
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|
T |
39292771 |
ttccttcttcttctaccgtaaatcttgttcgagatctttataactagttgcaatatatttttttggaaatatagttgcaagatatttttctcaactacta |
39292672 |
T |
|
Q |
100 |
agtcttatattcggtaatttaattaacacttgtgttctgctttgtaatatnnnnnnnnn--ccttgtattgtgcagtatatacttgaaacaagcgtgttt |
197 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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|
T |
39292671 |
agtcttatattcggtaatttaattaacacttgtgttctgctttgtaatataaaaaaaaaaaccttgtattgtgcagtatatacttgaaacaagcgtgttt |
39292572 |
T |
|
Q |
198 |
ccaagagaacacccatgcttgaaggagcttagggagatgacactaacacaccctaagtaagaccgtaga |
266 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
39292571 |
ccaagagaacacccatgcttgaaggagcttagggagatgacactaacacaccctaagtaagaccgtaga |
39292503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 679 - 804
Target Start/End: Complemental strand, 39292209 - 39292080
Alignment:
Q |
679 |
taatgttttaaatgaatctcaattactcaaatcttgaaagtttacacataaagatgtattaattaattaat----gacatacacgattgatgttgtaaaa |
774 |
Q |
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|
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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|
T |
39292209 |
taatgttttaaatgaatctcaattactcatatcttcaaagtttacacataaagatgtattaattaattaattaatgacatacacgattgatgttgtaaaa |
39292110 |
T |
|
Q |
775 |
caggtatatgatggctacacccggtgatga |
804 |
Q |
|
|
|||||||||||||||||||||||||||||| |
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|
T |
39292109 |
caggtatatgatggctacacccggtgatga |
39292080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 39235421 - 39235494
Alignment:
Q |
166 |
ttgtgcagtatatacttgaaacaagcgtgtttccaagagaacacccatgcttgaaggagcttagggagatgaca |
239 |
Q |
|
|
||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| | ||||||||| |
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|
T |
39235421 |
ttgtgcagtatatacttgacacaagtgtgtttccaagagaacacccttgcttgaaggagctccgtgagatgaca |
39235494 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 39047759 - 39047822
Alignment:
Q |
164 |
tattgtgcagtatatacttgaaacaagcgtgtttccaagagaacacccatgcttgaaggagctt |
227 |
Q |
|
|
||||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||||| |
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|
T |
39047759 |
tattgtgcagtatatacttgagaccagtgtgtttccaagagagcacccatgcttgaaggagctt |
39047822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 39053763 - 39053836
Alignment:
Q |
166 |
ttgtgcagtatatacttgaaacaagcgtgtttccaagagaacacccatgcttgaaggagcttagggagatgaca |
239 |
Q |
|
|
||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||||||| | ||||||||| |
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|
T |
39053763 |
ttgtgcagtatatacttgacacaagtgtgtttccaaatgaacacccttgcttgaaggagcttcgtgagatgaca |
39053836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 36203290 - 36203229
Alignment:
Q |
514 |
aatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
||||||||| |||| |||||||||||||||||| |||||||| | ||| |||||||||||| |
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|
T |
36203290 |
aatctcggaccttgcatatattatgcattgtccttatcaactgagctaagctcacgaggaca |
36203229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 37175798 - 37175842
Alignment:
Q |
392 |
aatatgttgaatgcataatttttaagataaagttgctactttaag |
436 |
Q |
|
|
|||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
37175798 |
aataagttgaatgcataatttccaagataaagttgctactttaag |
37175842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 392 - 436
Target Start/End: Complemental strand, 39292353 - 39292309
Alignment:
Q |
392 |
aatatgttgaatgcataatttttaagataaagttgctactttaag |
436 |
Q |
|
|
|||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
39292353 |
aataagttgaatgcataatttccaagataaagttgctactttaag |
39292309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 20096287 - 20096338
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||| |||||||||||||| |||||| ||||| | ||||||||||||||||| |
|
|
T |
20096287 |
cttgcatatattatgcattatccctaccaactgagttaaactcacgaggaca |
20096338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 574
Target Start/End: Complemental strand, 13121588 - 13121538
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||| ||||||||||||||||||||| ||||||| ||| ||||||||||| |
|
|
T |
13121588 |
cttgcatatattatgcattgtccctaccaactaagctaagctcacgaggac |
13121538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 577
Target Start/End: Complemental strand, 13276178 - 13276120
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||| |||| ||||||||||||||||||||| ||| | | |||| |||||||||||||| |
|
|
T |
13276178 |
cggaccttgcatatattatgcattgtccctaccaattgagttaagctcacgaggacaaa |
13276120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 563
Target Start/End: Complemental strand, 18541544 - 18541506
Alignment:
Q |
525 |
ttgtatatattatgcattgtccctatcaactaaattaaa |
563 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||| |
|
|
T |
18541544 |
ttgtatatattatgcattgtttctatcaactaaattaaa |
18541506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 574
Target Start/End: Complemental strand, 18635574 - 18635524
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
||||||||||||||||||||||| |||||||| | |||| |||||| |||| |
|
|
T |
18635574 |
cttgtatatattatgcattgtccttatcaactgagttaagctcacggggac |
18635524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 575
Target Start/End: Original strand, 22164291 - 22164337
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||||||||||||||| |||| ||||||| |||||||||||||||| |
|
|
T |
22164291 |
atatattatgcattgttcctaccaactaagctaaactcacgaggaca |
22164337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 575
Target Start/End: Complemental strand, 29737712 - 29737666
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||||||||||||||| |||| |||||||||||| ||||| |||||| |
|
|
T |
29737712 |
atatattatgcattgttcctagcaactaaattaagctcacaaggaca |
29737666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 574
Target Start/End: Complemental strand, 33024192 - 33024150
Alignment:
Q |
532 |
tattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
||||||||||||||| || ||||||| |||||||||||||||| |
|
|
T |
33024192 |
tattatgcattgtccataccaactaagttaaactcacgaggac |
33024150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 575
Target Start/End: Complemental strand, 43722804 - 43722758
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||||||||||||||||| || ||||| | ||||||||||||||||| |
|
|
T |
43722804 |
atatattatgcattgtccataccaactgagttaaactcacgaggaca |
43722758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 8495035 - 8494978
Alignment:
Q |
520 |
ggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||||||| ||||||||||||||||||||| ||||| | ||| ||||||||||||| |
|
|
T |
8495035 |
ggatcttgcatatattatgcattgtccctaccaactgagctaagttcacgaggacaaa |
8494978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 577
Target Start/End: Original strand, 11286786 - 11286851
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||||||| || |||| ||||||||||||||||| ||| ||||| || ||| |||| ||||||||| |
|
|
T |
11286786 |
tgaatctcagaccttgcatatattatgcattgtctctaccaactgaactaagctcaggaggacaaa |
11286851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 569
Target Start/End: Complemental strand, 38375001 - 38374956
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacg |
569 |
Q |
|
|
|||| ||||||||||||||||||||| ||||||| |||| |||||| |
|
|
T |
38375001 |
cttgcatatattatgcattgtccctaccaactaagttaagctcacg |
38374956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 38812862 - 38812919
Alignment:
Q |
520 |
ggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||||||| ||||||||||||||||||||| | ||| | |||||||||||| ||||| |
|
|
T |
38812862 |
ggatcttgcatatattatgcattgtccctaccgactgagctaaactcacgagaacaaa |
38812919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 50; Significance: 3e-19; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 7562764 - 7562837
Alignment:
Q |
166 |
ttgtgcagtatatacttgaaacaagcgtgtttccaagagaacacccatgcttgaaggagcttagggagatgaca |
239 |
Q |
|
|
||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| | ||||||||| |
|
|
T |
7562764 |
ttgtgcagtatatacttgacacaagtgtgtttccaagagaacacccttgcttgaaggagctccgtgagatgaca |
7562837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 512 - 575
Target Start/End: Original strand, 964746 - 964809
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
||||||||||||||| ||||||||||||||||| ||||| ||| | |||| |||||||||||| |
|
|
T |
964746 |
tgaatctcggatcttatatatattatgcattgtttctatcgactgagttaagctcacgaggaca |
964809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 519 - 570
Target Start/End: Original strand, 1285081 - 1285132
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacga |
570 |
Q |
|
|
||||||||| |||||||||||||||| |||||||||| | |||||||||||| |
|
|
T |
1285081 |
cggatcttgcatatattatgcattgttcctatcaactgagttaaactcacga |
1285132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 577
Target Start/End: Complemental strand, 3584260 - 3584195
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
||||||||| | |||| |||||||||||||||||| || ||||||| |||| ||| |||||||||| |
|
|
T |
3584260 |
tgaatctcgtaccttgcatatattatgcattgtccttaccaactaagttaagctcgcgaggacaaa |
3584195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 578
Target Start/End: Complemental strand, 22267620 - 22267571
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggacaaag |
578 |
Q |
|
|
||||||||||||||||| ||| ||||| | |||||||||||||||||||| |
|
|
T |
22267620 |
atatattatgcattgtctctaccaactgagttaaactcacgaggacaaag |
22267571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 24934794 - 24934749
Alignment:
Q |
390 |
ttaatatgttgaatgcataatttttaagataaagttgctactttaa |
435 |
Q |
|
|
|||||| |||||||||| ||||| |||||||||||||||||||||| |
|
|
T |
24934794 |
ttaataagttgaatgcacaatttctaagataaagttgctactttaa |
24934749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 523 - 571
Target Start/End: Complemental strand, 3948099 - 3948051
Alignment:
Q |
523 |
tcttgtatatattatgcattgtccctatcaactaaattaaactcacgag |
571 |
Q |
|
|
||||| ||||||||||||||||| ||||||||| | ||||||||||||| |
|
|
T |
3948099 |
tcttgcatatattatgcattgtctctatcaactgagttaaactcacgag |
3948051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 524 - 576
Target Start/End: Complemental strand, 35222968 - 35222916
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaa |
576 |
Q |
|
|
|||| |||||| |||||||||||||||||||| | ||||||||||||||||| |
|
|
T |
35222968 |
cttgcatatatcatgcattgtccctatcaactgacctaaactcacgaggacaa |
35222916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 575
Target Start/End: Original strand, 42829246 - 42829302
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||| |||| ||||||||||||||||||||||||||| | | || |||||||||||| |
|
|
T |
42829246 |
cggagcttgcatatattatgcattgtccctatcaactgagtcaagctcacgaggaca |
42829302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 577
Target Start/End: Complemental strand, 20762874 - 20762831
Alignment:
Q |
534 |
ttatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
||||||||||| |||||||||| || |||||||||||||||||| |
|
|
T |
20762874 |
ttatgcattgttcctatcaactgaactaaactcacgaggacaaa |
20762831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 30857292 - 30857241
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||| |||||||||||||||||| || ||||||| |||||||||||||||| |
|
|
T |
30857292 |
cttgcatatattatgcattgtccataccaactaagctaaactcacgaggaca |
30857241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 1399217 - 1399155
Alignment:
Q |
513 |
gaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
||||||| || |||| |||||| ||||||||||| || ||||| | ||||||||||||||||| |
|
|
T |
1399217 |
gaatctcagaccttgcatatatcatgcattgtccataccaactgagttaaactcacgaggaca |
1399155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 555
Target Start/End: Original strand, 28479870 - 28479904
Alignment:
Q |
521 |
gatcttgtatatattatgcattgtccctatcaact |
555 |
Q |
|
|
|||||||||||||||||||||||||| |||||||| |
|
|
T |
28479870 |
gatcttgtatatattatgcattgtccttatcaact |
28479904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 574
Target Start/End: Complemental strand, 5352384 - 5352323
Alignment:
Q |
513 |
gaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||||||||| ||||||||||||||| ||||||| || ||||| | ||| ||||||||||| |
|
|
T |
5352384 |
gaatctcggaccttgtatatattatgtattgtccttaccaactgagctaagctcacgaggac |
5352323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 37307885 - 37307922
Alignment:
Q |
518 |
tcggatcttgtatatattatgcattgtccctatcaact |
555 |
Q |
|
|
|||||||||| |||||||||||||||| |||||||||| |
|
|
T |
37307885 |
tcggatcttgcatatattatgcattgttcctatcaact |
37307922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 576
Target Start/End: Original strand, 22388197 - 22388244
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggacaa |
576 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
T |
22388197 |
atatattatgcattgtccctatcaactaagttaaacttacgaggacaa |
22388244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 529 - 576
Target Start/End: Original strand, 41573291 - 41573338
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggacaa |
576 |
Q |
|
|
||||||||||||||||||||| ||||| | |||||||||||||||||| |
|
|
T |
41573291 |
atatattatgcattgtccctaccaactgagttaaactcacgaggacaa |
41573338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 517 - 576
Target Start/End: Original strand, 43840335 - 43840394
Alignment:
Q |
517 |
ctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaa |
576 |
Q |
|
|
|||||||||| |||| ||||||||||||| |||||||| | |||||||||||||||||| |
|
|
T |
43840335 |
ctcggatcttacatattttatgcattgtccatatcaactgagttaaactcacgaggacaa |
43840394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 41998394 - 41998344
Alignment:
Q |
525 |
ttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||||||||||||| |||||||||||||||| | |||| |||||||||||| |
|
|
T |
41998394 |
ttgtatatattatgaattgtccctatcaactgagttaatctcacgaggaca |
41998344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 574
Target Start/End: Original strand, 2884462 - 2884515
Alignment:
Q |
521 |
gatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||||||||||||||||||||||||| |||||||| | |||| |||||||||| |
|
|
T |
2884462 |
gatcttgtatatattatgcattgtccatatcaactgagttaaggtcacgaggac |
2884515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 577
Target Start/End: Complemental strand, 18091247 - 18091194
Alignment:
Q |
525 |
ttgtatatatt-atgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
||||||||||| |||||||||||||||||||| | |||| |||||||||||||| |
|
|
T |
18091247 |
ttgtatatatttatgcattgtccctatcaactgagttaagctcacgaggacaaa |
18091194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 574
Target Start/End: Complemental strand, 27853410 - 27853349
Alignment:
Q |
513 |
gaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
||||| |||||||||||||||||||||||||| | || ||||| | |||| ||||||||||| |
|
|
T |
27853410 |
gaatcccggatcttgtatatattatgcattgttcataccaactgagttaagctcacgaggac |
27853349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 573
Target Start/End: Complemental strand, 44221031 - 44220982
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgagga |
573 |
Q |
|
|
|||||||||||| ||||||||| ||||||||||| |||| |||||||||| |
|
|
T |
44221031 |
cttgtatatattgtgcattgtctctatcaactaagttaagctcacgagga |
44220982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 512 - 568
Target Start/End: Complemental strand, 49868067 - 49868011
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcac |
568 |
Q |
|
|
||||||||||| |||| |||||||||||||| ||| |||||||| | |||||||||| |
|
|
T |
49868067 |
tgaatctcggaccttgcatatattatgcattatccatatcaactgagttaaactcac |
49868011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 575
Target Start/End: Complemental strand, 7732478 - 7732415
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||||| ||||||||| |||||||||||||| ||| ||||||| | |||||||||||||||| |
|
|
T |
7732478 |
tgaatcccggatcttggatatattatgcattatccaaatcaactgagctaaactcacgaggaca |
7732415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 16033467 - 16033518
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||| ||||||||||||||||||||||||||| | | || |||||||||||| |
|
|
T |
16033467 |
cttgcatatattatgcattgtccctatcaactgagtcaagctcacgaggaca |
16033518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 576
Target Start/End: Original strand, 29701342 - 29701389
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggacaa |
576 |
Q |
|
|
|||||||||||||||||| |||||||||| |||| ||||||| ||||| |
|
|
T |
29701342 |
atatattatgcattgtccatatcaactaagttaagctcacgaagacaa |
29701389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 571
Target Start/End: Complemental strand, 41974805 - 41974758
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgag |
571 |
Q |
|
|
|||| |||||||||||||| |||||||||||| || |||||||||||| |
|
|
T |
41974805 |
cttgcatatattatgcattatccctatcaactgaactaaactcacgag |
41974758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 575
Target Start/End: Original strand, 30678835 - 30678881
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
||||||||||||||||||||| ||||| | |||| |||||||||||| |
|
|
T |
30678835 |
atatattatgcattgtccctaccaactgagttaagctcacgaggaca |
30678881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 576
Target Start/End: Complemental strand, 41032981 - 41032923
Alignment:
Q |
518 |
tcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaa |
576 |
Q |
|
|
||||| ||||||||| ||||||||||| | |||||||| | |||| ||||||||||||| |
|
|
T |
41032981 |
tcggaccttgtatattttatgcattgttcatatcaactgagttaagctcacgaggacaa |
41032923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 574
Target Start/End: Complemental strand, 44641571 - 44641521
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||| |||||||||||||||||| |||||||| | ||||||||||||||| |
|
|
T |
44641571 |
cttgcatatattatgcattgtccatatcaactgagctaaactcacgaggac |
44641521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 570
Target Start/End: Original strand, 9116894 - 9116935
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacga |
570 |
Q |
|
|
|||||||||||||||||| |||||||| | |||||||||||| |
|
|
T |
9116894 |
atatattatgcattgtccatatcaactgagttaaactcacga |
9116935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 577
Target Start/End: Complemental strand, 11014288 - 11014223
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||||| || |||||| |||||||||||| |||| ||| ||||| | |||||||||||||||||| |
|
|
T |
11014288 |
tgaatcccgaatcttgcatatattatgcactgtctctaccaactgagctaaactcacgaggacaaa |
11014223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 573
Target Start/End: Original strand, 23772282 - 23772343
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgagga |
573 |
Q |
|
|
|||||||| ||||||||||||||||| |||||| |||| |||| || |||| ||||||||| |
|
|
T |
23772282 |
tgaatctcagatcttgtatatattatacattgttcctacaaactgaactaaattcacgagga |
23772343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 27687617 - 27687650
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtc |
545 |
Q |
|
|
||||||||| |||||||||||||||||||||||| |
|
|
T |
27687617 |
tgaatctcgtatcttgtatatattatgcattgtc |
27687650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 576
Target Start/End: Complemental strand, 41973304 - 41973247
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaa |
576 |
Q |
|
|
|||| |||| ||||||||||||||||||||| ||| ||| |||| ||| ||||||||| |
|
|
T |
41973304 |
cggaccttgcatatattatgcattgtccctaccaattaagttaagctcgcgaggacaa |
41973247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 23)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 577
Target Start/End: Complemental strand, 11931654 - 11931596
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
||||||||| ||||||||||||||||||||| ||| |||| ||| |||||||||||||| |
|
|
T |
11931654 |
cggatcttgcatatattatgcattgtccctaccaattaaactaagctcacgaggacaaa |
11931596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 29896311 - 29896362
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||| |||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
T |
29896311 |
cttgcatatattatgcattgtttctatcaactgaattaaactcacgaggaca |
29896362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 571
Target Start/End: Complemental strand, 1238209 - 1238159
Alignment:
Q |
521 |
gatcttgtatatattatgcattgtccctatcaactaaattaaactcacgag |
571 |
Q |
|
|
||||||||||||||||||||||||||||||||| | | |||| |||||||| |
|
|
T |
1238209 |
gatcttgtatatattatgcattgtccctatcaattgagttaagctcacgag |
1238159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 577
Target Start/End: Original strand, 3197096 - 3197149
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||| ||||||||||||||||||||| ||||| | |||||||||||||||||| |
|
|
T |
3197096 |
cttgcatatattatgcattgtccctaccaactgagctaaactcacgaggacaaa |
3197149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 566
Target Start/End: Complemental strand, 3904241 - 3904204
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactc |
566 |
Q |
|
|
||||||||||||||||||||||||||||| |||||||| |
|
|
T |
3904241 |
atatattatgcattgtccctatcaactaagttaaactc |
3904204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 529 - 577
Target Start/End: Original strand, 28277698 - 28277746
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||||||||||||||||| || ||||||| |||||||||||||||||| |
|
|
T |
28277698 |
atatattatgcattgtccttaccaactaagctaaactcacgaggacaaa |
28277746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 577
Target Start/End: Complemental strand, 45032740 - 45032684
Alignment:
Q |
521 |
gatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
||||||| ||||||||||||||||||||| ||||| | ||| |||||||||||||| |
|
|
T |
45032740 |
gatcttgcatatattatgcattgtccctaccaactgaggtaagctcacgaggacaaa |
45032684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 577
Target Start/End: Original strand, 6238587 - 6238634
Alignment:
Q |
530 |
tatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||||||||||||||||||| ||| ||| |||||||||||||||||| |
|
|
T |
6238587 |
tatattatgcattgtccctaccaattaagctaaactcacgaggacaaa |
6238634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 555
Target Start/End: Complemental strand, 7262862 - 7262819
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaact |
555 |
Q |
|
|
||||||| |||||||||||||||||||||||||| |||||||| |
|
|
T |
7262862 |
tgaatctttgatcttgtatatattatgcattgtccatatcaact |
7262819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 27244701 - 27244650
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||| ||||||||||||||||||||||||||| | ||| |||||||||||| |
|
|
T |
27244701 |
cttgcatatattatgcattgtccctatcaactgagctaagctcacgaggaca |
27244650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 571
Target Start/End: Original strand, 34364512 - 34364559
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgag |
571 |
Q |
|
|
||||||||||||||||||| | |||| ||||||| ||||||||||||| |
|
|
T |
34364512 |
cttgtatatattatgcattattcctaccaactaagttaaactcacgag |
34364559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 555
Target Start/End: Complemental strand, 37830769 - 37830726
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaact |
555 |
Q |
|
|
||||||| ||||||||||||||||||| |||||||||| ||||| |
|
|
T |
37830769 |
tgaatcttggatcttgtatatattatgtattgtccctaccaact |
37830726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 574
Target Start/End: Original strand, 6723094 - 6723144
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||| ||||||||| |||||||| |||||||| | |||||||||||||||| |
|
|
T |
6723094 |
cttgcatatattatacattgtccatatcaactgagttaaactcacgaggac |
6723144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 573
Target Start/End: Complemental strand, 7537159 - 7537105
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgagga |
573 |
Q |
|
|
|||| |||| |||||||||||||||| |||||||||| | |||| |||||||||| |
|
|
T |
7537159 |
cggaccttgcatatattatgcattgttcctatcaactgagttaatctcacgagga |
7537105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 577
Target Start/End: Original strand, 9517021 - 9517079
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||||||||||||||||||||||||| | || ||||| | ||| |||||||||||||| |
|
|
T |
9517021 |
cggatcttgtatatattatgcattgttcataccaactgagctaatctcacgaggacaaa |
9517079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 17897868 - 17897902
Alignment:
Q |
388 |
ttttaatatgttgaatgcataatttttaagataaa |
422 |
Q |
|
|
||||||||||||||||||| ||||||||||||||| |
|
|
T |
17897868 |
ttttaatatgttgaatgcacaatttttaagataaa |
17897902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 528 - 574
Target Start/End: Original strand, 43356654 - 43356700
Alignment:
Q |
528 |
tatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||||||||||||||||||||| ||||||| ||||||||| ||||| |
|
|
T |
43356654 |
tatatattatgcattgtccctaacaactaagataaactcactaggac |
43356700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 570
Target Start/End: Original strand, 13922650 - 13922695
Alignment:
Q |
525 |
ttgtatatattatgcattgtccctatcaactaaattaaactcacga |
570 |
Q |
|
|
||||||||||||||||||||||||| ||||| | |||| ||||||| |
|
|
T |
13922650 |
ttgtatatattatgcattgtccctaccaactgagttaagctcacga |
13922695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 549
Target Start/End: Complemental strand, 30045509 - 30045472
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtcccta |
549 |
Q |
|
|
||||||||| | |||||||||||||||||||||||||| |
|
|
T |
30045509 |
tgaatctcgaaccttgtatatattatgcattgtcccta |
30045472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 549
Target Start/End: Complemental strand, 30050672 - 30050635
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtcccta |
549 |
Q |
|
|
||||||||| | |||||||||||||||||||||||||| |
|
|
T |
30050672 |
tgaatctcgaaccttgtatatattatgcattgtcccta |
30050635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 549
Target Start/End: Complemental strand, 30141716 - 30141679
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtcccta |
549 |
Q |
|
|
||||||||| | |||||||||||||||||||||||||| |
|
|
T |
30141716 |
tgaatctcgaaccttgtatatattatgcattgtcccta |
30141679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 570
Target Start/End: Original strand, 30929059 - 30929108
Alignment:
Q |
521 |
gatcttgtatatattatgcattgtccctatcaactaaattaaactcacga |
570 |
Q |
|
|
|||||| ||||||||||||||||||| |||||||| | ||||||| |||| |
|
|
T |
30929059 |
gatcttatatatattatgcattgtccatatcaactgagttaaacttacga |
30929108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 39955494 - 39955531
Alignment:
Q |
388 |
ttttaatatgttgaatgcataatttttaagataaagtt |
425 |
Q |
|
|
||||||||||||||||||| |||||| ||||||||||| |
|
|
T |
39955494 |
ttttaatatgttgaatgcacaattttaaagataaagtt |
39955531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000005; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 524 - 577
Target Start/End: Complemental strand, 7553723 - 7553670
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||| ||||||||||||||||||||| ||||| | ||||||||||||||||||| |
|
|
T |
7553723 |
cttgcatatattatgcattgtccctaccaactgagttaaactcacgaggacaaa |
7553670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 388 - 435
Target Start/End: Original strand, 3036534 - 3036581
Alignment:
Q |
388 |
ttttaatatgttgaatgcataatttttaagataaagttgctactttaa |
435 |
Q |
|
|
|||||||| ||||||| || |||||||||||||||||||||||||||| |
|
|
T |
3036534 |
ttttaataagttgaatacacaatttttaagataaagttgctactttaa |
3036581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 512 - 555
Target Start/End: Original strand, 24696011 - 24696054
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaact |
555 |
Q |
|
|
|||||||||||||||| |||||||||||||||||| |||||||| |
|
|
T |
24696011 |
tgaatctcggatcttgcatatattatgcattgtccatatcaact |
24696054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 577
Target Start/End: Original strand, 26886054 - 26886112
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||||||| |||| ||||||||||||| || ||||||| ||||||||||||||||||| |
|
|
T |
26886054 |
cggatcttacatattttatgcattgtccataccaactaagttaaactcacgaggacaaa |
26886112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 8837969 - 8837913
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||| | |||| ||||||||||| |
|
|
T |
8837969 |
cggaccttgtatatattatgcattgtccctatcaaccgagttaagttcacgaggaca |
8837913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 6109213 - 6109162
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
||||||||| ||||||||||||| |||||||| | |||||||||||||||| |
|
|
T |
6109213 |
cttgtatattttatgcattgtccatatcaactgatataaactcacgaggaca |
6109162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 574
Target Start/End: Complemental strand, 6447238 - 6447183
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||| |||| |||||||||||||||||| || ||||| | |||||||||||||||| |
|
|
T |
6447238 |
cggaccttgcatatattatgcattgtccataccaactgagttaaactcacgaggac |
6447183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 576
Target Start/End: Complemental strand, 13575340 - 13575281
Alignment:
Q |
517 |
ctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaa |
576 |
Q |
|
|
|||||| |||| |||| |||||||||||||||| ||||| | ||||||||||||||||| |
|
|
T |
13575340 |
ctcggaacttgcatatgttatgcattgtccctaccaactgagctaaactcacgaggacaa |
13575281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 571
Target Start/End: Original strand, 33482166 - 33482213
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgag |
571 |
Q |
|
|
|||| ||| ||||||||||||||||||||||||| |||||||||||| |
|
|
T |
33482166 |
cttgcataaattatgcattgtccctatcaactaagctaaactcacgag |
33482213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 8687913 - 8687859
Alignment:
Q |
521 |
gatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
||||||||||||||||| ||||||||||| ||| | | ||||| ||||||||||| |
|
|
T |
8687913 |
gatcttgtatatattatacattgtccctaccaattgagttaaattcacgaggaca |
8687859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 574
Target Start/End: Complemental strand, 8982610 - 8982561
Alignment:
Q |
525 |
ttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||||||||||||||||||| | || |||| |||||||||||||||||| |
|
|
T |
8982610 |
ttgtatatattatgcattgttcatactaactgaattaaactcacgaggac |
8982561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 569
Target Start/End: Complemental strand, 10601819 - 10601762
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacg |
569 |
Q |
|
|
|||||| || |||||| |||||||||||||||||| || ||||| |||||| |||||| |
|
|
T |
10601819 |
tgaatcccgaatcttgcatatattatgcattgtccataccaactgaattaagctcacg |
10601762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 577
Target Start/End: Complemental strand, 14303209 - 14303156
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||||||||||||| |||||||| || ||||| | |||||||||||||||||| |
|
|
T |
14303209 |
cttgtatatattatacattgtccataccaactgagctaaactcacgaggacaaa |
14303156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 574
Target Start/End: Original strand, 32223901 - 32223946
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
||||||||||||||||| ||||||||| || ||| ||||||||||| |
|
|
T |
32223901 |
atatattatgcattgtctctatcaactgaactaagctcacgaggac |
32223946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 577
Target Start/End: Complemental strand, 33620942 - 33620889
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
||||||||||||||||||||||| || |||| | |||||||||||| |||||| |
|
|
T |
33620942 |
cttgtatatattatgcattgtccatactaactgagttaaactcacgaagacaaa |
33620889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000008; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 512 - 555
Target Start/End: Complemental strand, 2692271 - 2692228
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaact |
555 |
Q |
|
|
|||||||||||||||| |||||||||||||||||| |||||||| |
|
|
T |
2692271 |
tgaatctcggatcttgcatatattatgcattgtccatatcaact |
2692228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 530 - 574
Target Start/End: Complemental strand, 7927738 - 7927694
Alignment:
Q |
530 |
tatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||||||||||||||||||||||||| || ||| ||||||||||| |
|
|
T |
7927738 |
tatattatgcattgtccctatcaactgaactaagctcacgaggac |
7927694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 388 - 436
Target Start/End: Original strand, 28478663 - 28478711
Alignment:
Q |
388 |
ttttaatatgttgaatgcataatttttaagataaagttgctactttaag |
436 |
Q |
|
|
|||||||||||||||| || ||||| |||||||||||| |||||||||| |
|
|
T |
28478663 |
ttttaatatgttgaatacacaatttctaagataaagtttctactttaag |
28478711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 388 - 436
Target Start/End: Original strand, 29791118 - 29791166
Alignment:
Q |
388 |
ttttaatatgttgaatgcataatttttaagataaagttgctactttaag |
436 |
Q |
|
|
|||||||||||||||| || ||||| |||||||||||| |||||||||| |
|
|
T |
29791118 |
ttttaatatgttgaatacacaatttctaagataaagtttctactttaag |
29791166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 12412321 - 12412270
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||| ||||||||||||||||| ||| ||||||| |||| |||||||||||| |
|
|
T |
12412321 |
cttgcatatattatgcattgtctctaccaactaagttaagctcacgaggaca |
12412270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 512 - 574
Target Start/End: Complemental strand, 8809362 - 8809300
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||| ||||||||||| |||||||||||||||| |||||| | || ||||||||||||||| |
|
|
T |
8809362 |
tgaacctcggatcttgcatatattatgcattgtttttatcaattgaactaaactcacgaggac |
8809300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 528 - 574
Target Start/End: Original strand, 12336347 - 12336393
Alignment:
Q |
528 |
tatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
||||||||||||||||||| ||| |||| | |||||||||||||||| |
|
|
T |
12336347 |
tatatattatgcattgtccatattaactgagttaaactcacgaggac |
12336393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 574
Target Start/End: Complemental strand, 21885023 - 21884981
Alignment:
Q |
532 |
tattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||||||||||||||||||||| ||| ||||||| |||||||| |
|
|
T |
21885023 |
tattatgcattgtccctatcaattaagttaaacttacgaggac |
21884981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 575
Target Start/End: Complemental strand, 2445345 - 2445292
Alignment:
Q |
522 |
atcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
||||||||||||||||||||||| | |||||||| | |||| || ||||||||| |
|
|
T |
2445345 |
atcttgtatatattatgcattgttcatatcaactgagttaagcttacgaggaca |
2445292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 575
Target Start/End: Original strand, 3373396 - 3373449
Alignment:
Q |
522 |
atcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||||| |||||||||||||||||| |||||||| | ||||| |||||| |||| |
|
|
T |
3373396 |
atcttgcatatattatgcattgtccatatcaactgagttaaattcacgaagaca |
3373449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 577
Target Start/End: Complemental strand, 31971585 - 31971520
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||| |||||| |||| |||||||||||||||||| || ||||| | |||| || ||||||||||| |
|
|
T |
31971585 |
tgaacctcggaccttgcatatattatgcattgtccttaccaactgagttaagcttacgaggacaaa |
31971520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 36; Significance: 0.00000000008; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 40446027 - 40445976
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||| |||||||||||||||||| |||||||| | ||||||||||||||||| |
|
|
T |
40446027 |
cttgcatatattatgcattgtccttatcaactgagttaaactcacgaggaca |
40445976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 577
Target Start/End: Original strand, 1082224 - 1082289
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
||||||||||| |||||||||||||| ||||||||||| ||||| || ||| |||| |||| |||| |
|
|
T |
1082224 |
tgaatctcggaccttgtatatattatacattgtccctaccaactgaactaagctcatgagggcaaa |
1082289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 579
Target Start/End: Original strand, 8545001 - 8545061
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaaga |
579 |
Q |
|
|
|||| |||| |||||||||||||||||| |||||||| | |||| |||||||| ||||||| |
|
|
T |
8545001 |
cggaccttgcatatattatgcattgtccttatcaactgagttaagctcacgagaacaaaga |
8545061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 529 - 577
Target Start/End: Complemental strand, 10531579 - 10531531
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||||||||||||||||| || |||||||| ||| |||||||||||||| |
|
|
T |
10531579 |
atatattatgcattgtccatagcaactaaactaagctcacgaggacaaa |
10531531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 517 - 571
Target Start/End: Complemental strand, 17046385 - 17046331
Alignment:
Q |
517 |
ctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgag |
571 |
Q |
|
|
||||||||||| |||||||||||||||||| || ||||| | |||| |||||||| |
|
|
T |
17046385 |
ctcggatcttgcatatattatgcattgtccataccaactgagttaagctcacgag |
17046331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 575
Target Start/End: Complemental strand, 28447532 - 28447486
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
||||||||||||||||||||| |||| | ||||||||||||||||| |
|
|
T |
28447532 |
atatattatgcattgtccctactaactgagttaaactcacgaggaca |
28447486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 582
Target Start/End: Complemental strand, 34436895 - 34436837
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaagacat |
582 |
Q |
|
|
|||| ||||||||||||||||||||| ||||| | ||| |||||||||||| |||||| |
|
|
T |
34436895 |
cttgcatatattatgcattgtccctaccaactgagctaagctcacgaggacagagacat |
34436837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 574
Target Start/End: Complemental strand, 4432155 - 4432110
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||||||||||||||||| |||||||| | ||||||| |||||||| |
|
|
T |
4432155 |
atatattatgcattgtccttatcaactgagttaaacttacgaggac |
4432110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 557
Target Start/End: Original strand, 7861018 - 7861051
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaa |
557 |
Q |
|
|
|||| ||||||||||||||||||||||||||||| |
|
|
T |
7861018 |
cttgcatatattatgcattgtccctatcaactaa |
7861051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 577
Target Start/End: Original strand, 8885246 - 8885311
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
||||||||| | |||| |||| |||||||||||||| ||||| | | ||| ||||||||||||||| |
|
|
T |
8885246 |
tgaatctcgtaccttgcatattttatgcattgtcccaatcaaatgagttatactcacgaggacaaa |
8885311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 574
Target Start/End: Original strand, 42663222 - 42663271
Alignment:
Q |
525 |
ttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||||||||||||| ||||| |||| ||||| | |||||||||||||||| |
|
|
T |
42663222 |
ttgtatatattatgtattgttcctaacaactgagttaaactcacgaggac |
42663271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 36; Significance: 0.00000000008; HSPs: 19)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 529 - 576
Target Start/End: Complemental strand, 7827547 - 7827500
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggacaa |
576 |
Q |
|
|
|||||||||||||||||| |||||||| | |||||||||||||||||| |
|
|
T |
7827547 |
atatattatgcattgtccatatcaactgagttaaactcacgaggacaa |
7827500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 529 - 576
Target Start/End: Complemental strand, 7829935 - 7829888
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggacaa |
576 |
Q |
|
|
|||||||||||||||||| |||||||| | |||||||||||||||||| |
|
|
T |
7829935 |
atatattatgcattgtccatatcaactgagttaaactcacgaggacaa |
7829888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 32753872 - 32753821
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||||||||||||||||||||||||||||||| | | || |||||||||||| |
|
|
T |
32753872 |
cttgtatatattatgcattgtccctatcaactgagtcaagctcacgaggaca |
32753821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 525 - 580
Target Start/End: Original strand, 48924337 - 48924392
Alignment:
Q |
525 |
ttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaagac |
580 |
Q |
|
|
||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||| |
|
|
T |
48924337 |
ttgtatatattatacattgtccctaccaactaagctaaactcacgaggacagagac |
48924392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 570
Target Start/End: Complemental strand, 48517715 - 48517669
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacga |
570 |
Q |
|
|
||||||||||||||||||||| |||||||||| | |||||||||||| |
|
|
T |
48517715 |
cttgtatatattatgcattgttcctatcaactgagttaaactcacga |
48517669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 569
Target Start/End: Original strand, 12976619 - 12976664
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacg |
569 |
Q |
|
|
|||| ||||||||||||||||||||||||||| | ||||||||||| |
|
|
T |
12976619 |
cttgcatatattatgcattgtccctatcaactgagttaaactcacg |
12976664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 524 - 576
Target Start/End: Complemental strand, 28093398 - 28093346
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaa |
576 |
Q |
|
|
|||| |||||||||||||||||| || ||||| ||||||||||||| |||||| |
|
|
T |
28093398 |
cttgcatatattatgcattgtccataccaactgaattaaactcacggggacaa |
28093346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 577
Target Start/End: Complemental strand, 7738718 - 7738660
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||| |||| |||| |||||||||||||||| ||||| | |||| |||||||||||||| |
|
|
T |
7738718 |
cggaccttgcatattttatgcattgtccctaccaactgagttaagctcacgaggacaaa |
7738660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 10922320 - 10922370
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacg |
569 |
Q |
|
|
||||||||| ||||||||||||||||||||| ||||| | |||| |||||| |
|
|
T |
10922320 |
cggatcttgcatatattatgcattgtccctaccaactgagttaagctcacg |
10922370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 517 - 567
Target Start/End: Original strand, 39869817 - 39869867
Alignment:
Q |
517 |
ctcggatcttgtatatattatgcattgtccctatcaactaaattaaactca |
567 |
Q |
|
|
|||||| ||||||||||||||||||||||| || ||||| | ||||||||| |
|
|
T |
39869817 |
ctcggaccttgtatatattatgcattgtccttaccaactgagttaaactca |
39869867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 46226089 - 46226143
Alignment:
Q |
519 |
cggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgagga |
573 |
Q |
|
|
|||| |||| ||||||||||||||||||||| ||| | | ||||||||||||||| |
|
|
T |
46226089 |
cggaccttgcatatattatgcattgtccctaccaattgagttaaactcacgagga |
46226143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 574
Target Start/End: Original strand, 7464513 - 7464558
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
||||||||||||||||||||| ||||| | |||| ||||||||||| |
|
|
T |
7464513 |
atatattatgcattgtccctaccaactgagttaagctcacgaggac |
7464558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 573
Target Start/End: Complemental strand, 8139759 - 8139710
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgagga |
573 |
Q |
|
|
|||| |||||||||||||||||| || |||||||| ||| |||||||||| |
|
|
T |
8139759 |
cttgcatatattatgcattgtccataccaactaaactaagctcacgagga |
8139710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 577
Target Start/End: Complemental strand, 9598495 - 9598430
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
||||||||||| |||| |||| |||| ||||||||| | ||||| || ||| |||||||||||||| |
|
|
T |
9598495 |
tgaatctcggaccttgcatattttatacattgtcccaaccaactgaactaagctcacgaggacaaa |
9598430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 578
Target Start/End: Complemental strand, 22462351 - 22462302
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggacaaag |
578 |
Q |
|
|
|||||||||||||||||| |||||||| | |||| |||||| |||||||| |
|
|
T |
22462351 |
atatattatgcattgtccttatcaactgagttaagctcacggggacaaag |
22462302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 578
Target Start/End: Complemental strand, 23332689 - 23332640
Alignment:
Q |
529 |
atatattatgcattgtccctatcaactaaattaaactcacgaggacaaag |
578 |
Q |
|
|
|||||||||||||||| | |||||||||| |||| |||||||||||||| |
|
|
T |
23332689 |
atatattatgcattgttcatatcaactaagttaagttcacgaggacaaag |
23332640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 577
Target Start/End: Original strand, 28052399 - 28052452
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggacaaa |
577 |
Q |
|
|
|||| ||| ||||||| ||||||||||||||| || ||||||||| |||||||| |
|
|
T |
28052399 |
cttggataaattatgcgttgtccctatcaactgaactaaactcacaaggacaaa |
28052452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 425
Target Start/End: Complemental strand, 31110669 - 31110632
Alignment:
Q |
388 |
ttttaatatgttgaatgcataatttttaagataaagtt |
425 |
Q |
|
|
||||||||| | |||||||||||||||||||||||||| |
|
|
T |
31110669 |
ttttaatatctcgaatgcataatttttaagataaagtt |
31110632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 574
Target Start/End: Complemental strand, 38388019 - 38387966
Alignment:
Q |
521 |
gatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
||||||| ||||||||||||||||| ||||||||| | ||| ||||||||||| |
|
|
T |
38388019 |
gatcttgcatatattatgcattgtcactatcaactgagctaagctcacgaggac |
38387966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0160 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0160
Description:
Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 575
Target Start/End: Complemental strand, 22967 - 22904
Alignment:
Q |
512 |
tgaatctcggatcttgtatatattatgcattgtccctatcaactaaattaaactcacgaggaca |
575 |
Q |
|
|
|||| |||||| |||| |||| ||||||||||| | ||||||||||| ||| |||||||||||| |
|
|
T |
22967 |
tgaacctcggaccttgcatattttatgcattgttcatatcaactaaactaagctcacgaggaca |
22904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0143 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0143
Description:
Target: scaffold0143; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 571
Target Start/End: Complemental strand, 4510 - 4463
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgag |
571 |
Q |
|
|
|||| ||| ||||||||||||||||||||||||| |||||||||||| |
|
|
T |
4510 |
cttgcataaattatgcattgtccctatcaactaagctaaactcacgag |
4463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 574
Target Start/End: Complemental strand, 99081 - 99031
Alignment:
Q |
524 |
cttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
|||| ||||||||||||||||||||||||||| | | || ||||||||||| |
|
|
T |
99081 |
cttgcatatattatgcattgtccctatcaactgagtcaagctcacgaggac |
99031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 574
Target Start/End: Complemental strand, 63905 - 63856
Alignment:
Q |
525 |
ttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
||||||||||||| ||||||||||| ||||| | ||||||||||||||| |
|
|
T |
63905 |
ttgtatatattatacattgtccctaccaactgagctaaactcacgaggac |
63856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 574
Target Start/End: Complemental strand, 71237 - 71188
Alignment:
Q |
525 |
ttgtatatattatgcattgtccctatcaactaaattaaactcacgaggac |
574 |
Q |
|
|
||||||||||||| ||||||||||| ||||| | ||||||||||||||| |
|
|
T |
71237 |
ttgtatatattatacattgtccctaccaactgagctaaactcacgaggac |
71188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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