View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: R108-L2_15 (Length: 122)
Name: R108-L2_15
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] R108-L2_15 |
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Alignment Details
Target: chr1 (Bit Score: 73; Significance: 8e-34; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 73; E-Value: 8e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34668245 - 34668341
Alignment:
| Q |
1 |
ctgataccacattaagtatgattatttgattatctttcttgttcataacttttagcagtttatattgatgtacaattctgatttgtaggcaattgta |
97 |
Q |
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| T |
34668245 |
ctgataccacattaagtatgattatttgattatctttcttgttcaaaactgttagcaattaatattgatgtacaattttgatttgtagacaattgta |
34668341 |
T |
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