View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: R108-L3_2 (Length: 797)

Name: R108-L3_2
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] R108-L3_2
R108-L3_2
[»] chr3 (69 HSPs)
chr3 (430-797)||(38927823-38928190)
chr3 (1-196)||(38927630-38927827)
chr3 (428-614)||(37600127-37600313)
chr3 (195-310)||(38927116-38927231)
chr3 (427-614)||(10769722-10769909)
chr3 (432-614)||(54140890-54141072)
chr3 (426-611)||(27243040-27243225)
chr3 (476-608)||(24748913-24749045)
chr3 (513-614)||(29775139-29775238)
chr3 (440-567)||(46237090-46237217)
chr3 (428-613)||(24734702-24734886)
chr3 (425-613)||(41451894-41452081)
chr3 (543-612)||(27243047-27243116)
chr3 (547-619)||(37600243-37600315)
chr3 (432-611)||(13809083-13809261)
chr3 (537-614)||(20493548-20493625)
chr3 (478-611)||(20791343-20791475)
chr3 (462-601)||(357791-357928)
chr3 (547-614)||(10769838-10769905)
chr3 (547-614)||(28529253-28529320)
chr3 (424-605)||(28529246-28529424)
chr3 (547-608)||(46237159-46237220)
chr3 (451-607)||(43657000-43657156)
chr3 (547-614)||(5452173-5452240)
chr3 (426-529)||(21232604-21232707)
chr3 (426-613)||(37776702-37776888)
chr3 (547-618)||(52951372-52951443)
chr3 (547-605)||(54141006-54141064)
chr3 (543-619)||(46160944-46161018)
chr3 (543-612)||(50661631-50661700)
chr3 (428-613)||(5452061-5452243)
chr3 (547-614)||(21232635-21232702)
chr3 (550-613)||(52123955-52124018)
chr3 (476-578)||(50661555-50661657)
chr3 (549-611)||(52951475-52951537)
chr3 (476-613)||(29588732-29588868)
chr3 (537-614)||(37776806-37776883)
chr3 (424-500)||(37600120-37600196)
chr3 (541-613)||(40715969-40716041)
chr3 (547-619)||(46575943-46576015)
chr3 (428-500)||(54140887-54140959)
chr3 (552-603)||(29235658-29235709)
chr3 (547-614)||(29389126-29389193)
chr3 (426-496)||(29775134-29775202)
chr3 (560-614)||(30624633-30624685)
chr3 (547-613)||(13809083-13809148)
chr3 (547-613)||(24749023-24749089)
chr3 (478-611)||(14236066-14236198)
chr3 (428-605)||(20493452-20493628)
chr3 (431-500)||(38928006-38928075)
chr3 (551-588)||(46156741-46156778)
chr3 (428-620)||(46575945-46576135)
chr3 (554-603)||(54187050-54187099)
chr3 (428-500)||(10769719-10769791)
chr3 (552-604)||(13639412-13639464)
chr3 (547-614)||(46450067-46450132)
chr3 (552-604)||(48543262-48543314)
chr3 (526-612)||(15790370-15790454)
chr3 (547-614)||(20791296-20791363)
chr3 (549-620)||(24734699-24734770)
chr3 (547-614)||(38928122-38928189)
chr3 (550-613)||(44844100-44844163)
chr3 (547-614)||(45515608-45515675)
chr3 (547-588)||(26310559-26310600)
chr3 (559-620)||(30624746-30624807)
chr3 (480-585)||(37926580-37926685)
chr3 (549-614)||(41452010-41452075)
chr3 (547-596)||(41707552-41707601)
chr3 (560-613)||(50320541-50320594)
[»] chr1 (75 HSPs)
chr1 (426-621)||(11430436-11430630)
chr1 (426-612)||(11135734-11135920)
chr1 (426-621)||(32848573-32848768)
chr1 (432-614)||(41095606-41095788)
chr1 (428-614)||(14093998-14094184)
chr1 (431-576)||(41917995-41918140)
chr1 (476-614)||(13388334-13388474)
chr1 (476-619)||(29418526-29418670)
chr1 (476-613)||(50773109-50773246)
chr1 (432-611)||(13114670-13114849)
chr1 (547-619)||(41917990-41918062)
chr1 (490-583)||(24436495-24436588)
chr1 (478-619)||(43832316-43832457)
chr1 (547-614)||(11135739-11135806)
chr1 (476-611)||(50424866-50425001)
chr1 (547-613)||(41095722-41095788)
chr1 (488-619)||(30678904-30679034)
chr1 (476-603)||(15660938-15661063)
chr1 (550-614)||(32848699-32848763)
chr1 (547-614)||(11430441-11430508)
chr1 (431-611)||(19101602-19101781)
chr1 (448-614)||(28109885-28110050)
chr1 (427-529)||(43851117-43851219)
chr1 (547-611)||(4578690-4578752)
chr1 (537-614)||(9165302-9165379)
chr1 (547-620)||(44739112-44739185)
chr1 (548-620)||(25543334-25543406)
chr1 (457-613)||(41948145-41948300)
chr1 (548-613)||(13114784-13114849)
chr1 (518-613)||(8899101-8899195)
chr1 (547-614)||(14094114-14094181)
chr1 (547-614)||(26980375-26980442)
chr1 (428-543)||(44739115-44739230)
chr1 (548-614)||(6133738-6133804)
chr1 (426-500)||(11135853-11135927)
chr1 (543-597)||(28109885-28109939)
chr1 (549-614)||(39039470-39039535)
chr1 (561-617)||(3872760-3872816)
chr1 (552-588)||(24886063-24886099)
chr1 (428-612)||(26980262-26980445)
chr1 (428-500)||(41095603-41095675)
chr1 (548-608)||(50773225-50773285)
chr1 (547-614)||(19101714-19101781)
chr1 (431-611)||(22540368-22540543)
chr1 (547-614)||(22540368-22540435)
chr1 (547-614)||(43851148-43851215)
chr1 (547-613)||(18157039-18157105)
chr1 (553-603)||(28274797-28274847)
chr1 (476-588)||(4578599-4578712)
chr1 (577-614)||(13889289-13889326)
chr1 (428-500)||(11430555-11430626)
chr1 (550-614)||(21466687-21466751)
chr1 (553-613)||(24886159-24886219)
chr1 (553-613)||(29068200-29068260)
chr1 (547-614)||(39019575-39019636)
chr1 (567-611)||(39019702-39019746)
chr1 (549-585)||(50308786-50308822)
chr1 (432-500)||(50773109-50773177)
chr1 (547-614)||(15523210-15523277)
chr1 (547-614)||(15531204-15531271)
chr1 (560-619)||(16948522-16948581)
chr1 (553-588)||(19078937-19078972)
chr1 (553-588)||(19126825-19126860)
chr1 (552-603)||(29068089-29068140)
chr1 (550-613)||(39974199-39974262)
chr1 (548-587)||(50424980-50425019)
chr1 (560-614)||(931374-931428)
chr1 (559-613)||(6133624-6133678)
chr1 (550-611)||(15928673-15928732)
chr1 (550-604)||(25543457-25543511)
chr1 (563-613)||(29663575-29663625)
chr1 (428-501)||(9165299-9165372)
chr1 (550-611)||(12767329-12767390)
chr1 (547-576)||(13388452-13388481)
chr1 (434-499)||(50424866-50424931)
[»] chr6 (41 HSPs)
chr6 (428-614)||(19090212-19090398)
chr6 (434-618)||(35128720-35128900)
chr6 (428-608)||(10060856-10061036)
chr6 (441-614)||(19737432-19737605)
chr6 (428-617)||(6531296-6531481)
chr6 (428-588)||(373396-373556)
chr6 (457-613)||(4595768-4595922)
chr6 (431-611)||(21987292-21987471)
chr6 (547-619)||(19090328-19090400)
chr6 (547-614)||(6531411-6531478)
chr6 (476-612)||(34905381-34905516)
chr6 (547-611)||(35128836-35128900)
chr6 (547-613)||(34905337-34905403)
chr6 (547-620)||(10060853-10060926)
chr6 (440-616)||(12794809-12794985)
chr6 (423-500)||(19090204-19090281)
chr6 (478-613)||(1392675-1392808)
chr6 (552-619)||(10133276-10133343)
chr6 (547-606)||(31116237-31116296)
chr6 (527-585)||(9940387-9940445)
chr6 (550-619)||(8441953-8442022)
chr6 (550-619)||(8450757-8450826)
chr6 (547-604)||(19737548-19737605)
chr6 (552-604)||(32439486-32439538)
chr6 (547-614)||(373399-373466)
chr6 (543-614)||(12690252-12690323)
chr6 (510-576)||(6992306-6992372)
chr6 (550-624)||(17226645-17226719)
chr6 (547-588)||(4595768-4595809)
chr6 (561-614)||(12753758-12753811)
chr6 (426-588)||(445813-445974)
chr6 (440-588)||(31116148-31116295)
chr6 (547-614)||(445818-445885)
chr6 (547-614)||(21987292-21987359)
chr6 (132-190)||(27096360-27096418)
chr6 (547-604)||(5106308-5106365)
chr6 (559-604)||(8441857-8441902)
chr6 (559-604)||(8450661-8450706)
chr6 (575-608)||(12794955-12794988)
chr6 (566-611)||(29423350-29423395)
chr6 (548-613)||(32122796-32122861)
[»] chr5 (54 HSPs)
chr5 (427-619)||(42224583-42224775)
chr5 (426-611)||(40971453-40971638)
chr5 (428-611)||(4959275-4959458)
chr5 (434-614)||(26072106-26072286)
chr5 (422-614)||(17568699-17568891)
chr5 (441-611)||(6263893-6264061)
chr5 (457-619)||(32050333-32050495)
chr5 (432-614)||(8912511-8912695)
chr5 (476-620)||(24915100-24915242)
chr5 (476-620)||(24990931-24991073)
chr5 (426-608)||(13456170-13456348)
chr5 (476-613)||(34818231-34818368)
chr5 (428-613)||(28611777-28611961)
chr5 (547-619)||(4959273-4959345)
chr5 (547-614)||(42224704-42224771)
chr5 (547-614)||(40971566-40971633)
chr5 (548-614)||(6263883-6263949)
chr5 (422-499)||(26072218-26072295)
chr5 (547-611)||(26072106-26072170)
chr5 (431-603)||(30325883-30326054)
chr5 (428-619)||(34368357-34368547)
chr5 (547-613)||(31542356-31542422)
chr5 (423-500)||(42224580-42224657)
chr5 (476-588)||(10142000-10142111)
chr5 (559-607)||(28490727-28490775)
chr5 (553-613)||(30892229-30892289)
chr5 (559-614)||(28611903-28611958)
chr5 (547-614)||(30325987-30326054)
chr5 (550-613)||(41105569-41105632)
chr5 (427-501)||(4959391-4959465)
chr5 (422-500)||(6263995-6264073)
chr5 (441-611)||(27592453-27592622)
chr5 (550-620)||(28223768-28223838)
chr5 (431-501)||(32050420-32050490)
chr5 (547-620)||(1649544-1649617)
chr5 (561-614)||(2443686-2443739)
chr5 (524-577)||(27726832-27726885)
chr5 (547-611)||(12076063-12076127)
chr5 (552-603)||(5990638-5990689)
chr5 (548-611)||(17568816-17568879)
chr5 (537-588)||(25710575-25710626)
chr5 (547-614)||(27592565-27592632)
chr5 (559-614)||(34368360-34368415)
chr5 (552-586)||(18237255-18237289)
chr5 (549-619)||(28490837-28490907)
chr5 (566-608)||(29155522-29155564)
chr5 (565-611)||(32401251-32401297)
chr5 (571-613)||(40926184-40926226)
chr5 (550-611)||(2201589-2201650)
chr5 (552-613)||(8912511-8912572)
chr5 (547-588)||(16875378-16875419)
chr5 (428-500)||(24915169-24915239)
chr5 (428-500)||(24991000-24991070)
chr5 (547-619)||(36494218-36494291)
[»] chr7 (84 HSPs)
chr7 (427-614)||(13919776-13919963)
chr7 (429-611)||(45909453-45909636)
chr7 (428-614)||(26703437-26703621)
chr7 (426-613)||(25428477-25428664)
chr7 (470-614)||(19840882-19841026)
chr7 (429-579)||(19494371-19494521)
chr7 (422-614)||(14759634-14759826)
chr7 (432-611)||(24539123-24539302)
chr7 (423-573)||(22786143-22786293)
chr7 (428-576)||(17354562-17354710)
chr7 (432-611)||(17749695-17749874)
chr7 (428-623)||(27888279-27888473)
chr7 (488-605)||(26189960-26190077)
chr7 (220-288)||(10477729-10477797)
chr7 (530-621)||(37549617-37549708)
chr7 (547-614)||(17354640-17354707)
chr7 (426-613)||(22189934-22190120)
chr7 (547-614)||(22786151-22786218)
chr7 (547-613)||(13919781-13919847)
chr7 (427-607)||(33008100-33008276)
chr7 (549-620)||(31502579-31502650)
chr7 (549-611)||(2520636-2520698)
chr7 (537-621)||(32205072-32205153)
chr7 (548-613)||(24539237-24539302)
chr7 (547-619)||(26703553-26703623)
chr7 (547-619)||(19422947-19423019)
chr7 (550-614)||(33008104-33008168)
chr7 (426-585)||(10619419-10619576)
chr7 (547-614)||(19494452-19494519)
chr7 (547-614)||(25428592-25428659)
chr7 (548-614)||(10619506-10619571)
chr7 (547-617)||(14795128-14795198)
chr7 (547-617)||(15242120-15242190)
chr7 (548-613)||(17749695-17749760)
chr7 (547-620)||(27888276-27888349)
chr7 (428-500)||(13919894-13919966)
chr7 (425-497)||(19840876-19840948)
chr7 (561-613)||(27949402-27949454)
chr7 (553-613)||(41873435-41873495)
chr7 (430-611)||(48374440-48374618)
chr7 (547-614)||(22189939-22190006)
chr7 (547-618)||(32212982-32213053)
chr7 (552-603)||(43930078-43930129)
chr7 (440-603)||(47821990-47822153)
chr7 (547-613)||(31959970-31960036)
chr7 (556-621)||(2520712-2520777)
chr7 (559-612)||(6580002-6580055)
chr7 (550-611)||(20954798-20954859)
chr7 (512-569)||(21963172-21963229)
chr7 (549-610)||(27949277-27949338)
chr7 (462-613)||(46517322-46517472)
chr7 (553-606)||(47822101-47822154)
chr7 (431-610)||(32212872-32213049)
chr7 (547-614)||(45909455-45909523)
chr7 (480-574)||(46067987-46068079)
chr7 (547-613)||(11824072-11824138)
chr7 (547-609)||(23934022-23934084)
chr7 (426-496)||(26190021-26190091)
chr7 (510-588)||(26459072-26459150)
chr7 (430-500)||(26703436-26703506)
chr7 (547-613)||(42887741-42887807)
chr7 (550-608)||(46994366-46994424)
chr7 (247-288)||(6953989-6954030)
chr7 (462-609)||(11692210-11692356)
chr7 (560-613)||(39254211-39254264)
chr7 (569-614)||(42863569-42863614)
chr7 (547-611)||(46067940-46068005)
chr7 (440-500)||(25428485-25428545)
chr7 (428-606)||(32205076-32205250)
chr7 (428-500)||(37549621-37549693)
chr7 (550-613)||(6442283-6442346)
chr7 (548-611)||(14759646-14759709)
chr7 (526-613)||(34281017-34281104)
chr7 (553-604)||(36738579-36738630)
chr7 (550-613)||(44350801-44350864)
chr7 (547-610)||(44511049-44511112)
chr7 (547-613)||(27320226-27320292)
chr7 (432-502)||(31959966-31960036)
chr7 (434-500)||(45909570-45909636)
chr7 (547-620)||(46517287-46517358)
chr7 (547-588)||(7775026-7775067)
chr7 (552-613)||(25980750-25980811)
chr7 (510-567)||(31959860-31959917)
chr7 (550-599)||(32055591-32055640)
[»] chr2 (73 HSPs)
chr2 (426-617)||(28898031-28898222)
chr2 (431-614)||(42182889-42183072)
chr2 (425-619)||(37228492-37228687)
chr2 (428-608)||(1110195-1110375)
chr2 (427-613)||(4964671-4964857)
chr2 (427-588)||(31395468-31395629)
chr2 (427-620)||(15508910-15509103)
chr2 (431-620)||(37398805-37398994)
chr2 (427-606)||(24895272-24895449)
chr2 (547-614)||(42182889-42182956)
chr2 (490-628)||(6315717-6315855)
chr2 (528-613)||(27968919-27969004)
chr2 (528-613)||(28091583-28091668)
chr2 (528-613)||(28101815-28101900)
chr2 (522-619)||(37719829-37719926)
chr2 (547-614)||(28898150-28898217)
chr2 (547-619)||(1110193-1110265)
chr2 (553-613)||(37228499-37228559)
chr2 (547-614)||(15508914-15508981)
chr2 (531-625)||(20951595-20951687)
chr2 (432-619)||(44274236-44274421)
chr2 (547-613)||(1107039-1107105)
chr2 (547-617)||(45554564-45554634)
chr2 (426-611)||(12989186-12989370)
chr2 (547-614)||(4964786-4964853)
chr2 (424-613)||(26767760-26767948)
chr2 (547-614)||(31395558-31395625)
chr2 (548-614)||(40535104-40535170)
chr2 (548-621)||(37398928-37399001)
chr2 (549-613)||(6980235-6980299)
chr2 (426-537)||(18511283-18511394)
chr2 (547-614)||(18511322-18511389)
chr2 (547-614)||(41805889-41805956)
chr2 (547-613)||(3804585-3804651)
chr2 (547-613)||(9470082-9470148)
chr2 (548-614)||(11539423-11539489)
chr2 (547-620)||(19427360-19427431)
chr2 (549-606)||(8009521-8009578)
chr2 (478-611)||(38104295-38104427)
chr2 (440-516)||(1107047-1107123)
chr2 (553-613)||(5139969-5140029)
chr2 (428-500)||(6315772-6315844)
chr2 (550-613)||(6980119-6980182)
chr2 (547-614)||(12989191-12989258)
chr2 (547-614)||(26767874-26767941)
chr2 (552-618)||(19190626-19190692)
chr2 (427-497)||(40535104-40535174)
chr2 (547-613)||(44274236-44274301)
chr2 (569-614)||(19193500-19193545)
chr2 (428-500)||(20951603-20951673)
chr2 (550-611)||(38464281-38464342)
chr2 (547-614)||(10339768-10339833)
chr2 (524-584)||(21447197-21447257)
chr2 (480-608)||(23463829-23463957)
chr2 (428-500)||(37228613-37228685)
chr2 (428-500)||(37719831-37719903)
chr2 (554-614)||(41546147-41546207)
chr2 (548-588)||(42579771-42579811)
chr2 (547-622)||(14715740-14715815)
chr2 (547-614)||(23463939-23464006)
chr2 (553-611)||(31494211-31494267)
chr2 (547-614)||(33678228-33678295)
chr2 (554-584)||(7709776-7709806)
chr2 (572-614)||(29806185-29806227)
chr2 (569-611)||(30706407-30706449)
chr2 (490-576)||(33746955-33747041)
chr2 (552-586)||(37285234-37285268)
chr2 (428-506)||(41805881-41805959)
chr2 (550-611)||(25238278-25238339)
chr2 (432-493)||(27968919-27968980)
chr2 (432-493)||(28091607-28091668)
chr2 (432-493)||(28101839-28101900)
chr2 (431-500)||(28898034-28898103)
[»] chr4 (72 HSPs)
chr4 (428-614)||(42862418-42862604)
chr4 (426-611)||(13069936-13070120)
chr4 (427-614)||(44832459-44832646)
chr4 (441-619)||(2187806-2187983)
chr4 (444-588)||(16178597-16178740)
chr4 (427-620)||(37315559-37315749)
chr4 (429-614)||(47237734-47237923)
chr4 (490-614)||(51206102-51206226)
chr4 (447-613)||(30866930-30867096)
chr4 (478-613)||(39016710-39016845)
chr4 (425-613)||(8108950-8109137)
chr4 (548-612)||(40812039-40812103)
chr4 (440-578)||(2088698-2088836)
chr4 (547-613)||(8108957-8109023)
chr4 (476-585)||(41278644-41278753)
chr4 (547-613)||(37315564-37315627)
chr4 (480-611)||(19447180-19447311)
chr4 (547-617)||(43771123-43771193)
chr4 (548-614)||(47237855-47237921)
chr4 (428-573)||(40812034-40812179)
chr4 (548-619)||(40991703-40991774)
chr4 (547-614)||(42862534-42862601)
chr4 (431-613)||(43771126-43771307)
chr4 (547-608)||(2088778-2088839)
chr4 (480-601)||(25719123-25719244)
chr4 (428-497)||(42862415-42862484)
chr4 (553-613)||(37306405-37306465)
chr4 (547-614)||(13069941-13070007)
chr4 (429-500)||(51206157-51206228)
chr4 (547-613)||(2187926-2187992)
chr4 (560-610)||(20454666-20454716)
chr4 (547-613)||(39016664-39016730)
chr4 (426-516)||(48608075-48608165)
chr4 (543-614)||(20225450-20225519)
chr4 (428-500)||(44832577-44832649)
chr4 (553-613)||(51475163-51475223)
chr4 (550-613)||(26361307-26361370)
chr4 (547-614)||(44832463-44832530)
chr4 (547-609)||(16178589-16178650)
chr4 (537-599)||(21776948-21777010)
chr4 (495-608)||(5545642-5545755)
chr4 (247-288)||(18184059-18184100)
chr4 (550-606)||(754586-754642)
chr4 (553-613)||(6540345-6540405)
chr4 (543-603)||(24106756-24106816)
chr4 (552-604)||(39810529-39810581)
chr4 (547-619)||(50571859-50571931)
chr4 (550-605)||(722275-722330)
chr4 (559-614)||(24834705-24834760)
chr4 (547-609)||(25719226-25719286)
chr4 (552-603)||(31699598-31699649)
chr4 (462-613)||(34129399-34129549)
chr4 (547-614)||(39471157-39471224)
chr4 (550-613)||(39471275-39471338)
chr4 (526-585)||(49738950-49739009)
chr4 (547-614)||(50164395-50164462)
chr4 (547-609)||(20454545-20454607)
chr4 (446-608)||(21776848-21777010)
chr4 (547-613)||(24834579-24834645)
chr4 (559-613)||(27654478-27654532)
chr4 (549-611)||(27654595-27654657)
chr4 (553-611)||(33787989-33788047)
chr4 (550-608)||(40991593-40991651)
chr4 (559-609)||(48339465-48339515)
chr4 (573-611)||(51904616-51904654)
chr4 (569-619)||(53870998-53871048)
chr4 (427-500)||(13070054-13070127)
chr4 (428-540)||(20225412-20225522)
chr4 (547-608)||(22592310-22592371)
chr4 (431-500)||(37315674-37315743)
chr4 (560-613)||(38537512-38537565)
chr4 (559-612)||(48339340-48339393)
[»] chr8 (50 HSPs)
chr8 (433-611)||(1205829-1206007)
chr8 (428-610)||(7599423-7599605)
chr8 (432-602)||(35689481-35689651)
chr8 (432-611)||(6387564-6387741)
chr8 (478-614)||(13407321-13407457)
chr8 (428-588)||(33417680-33417839)
chr8 (510-610)||(12212126-12212226)
chr8 (510-610)||(12456554-12456654)
chr8 (479-613)||(28211885-28212018)
chr8 (428-613)||(1977172-1977356)
chr8 (490-623)||(34303426-34303559)
chr8 (550-613)||(16983512-16983575)
chr8 (488-588)||(25915086-25915188)
chr8 (478-552)||(43026338-43026412)
chr8 (547-612)||(1205829-1205894)
chr8 (510-614)||(23142815-23142916)
chr8 (547-604)||(35689490-35689547)
chr8 (559-619)||(8914766-8914826)
chr8 (559-610)||(5980006-5980057)
chr8 (547-613)||(6387564-6387628)
chr8 (547-614)||(7599535-7599602)
chr8 (560-614)||(31691637-31691691)
chr8 (547-613)||(32072098-32072164)
chr8 (547-588)||(44709297-44709338)
chr8 (547-619)||(1977286-1977358)
chr8 (559-605)||(24055932-24055978)
chr8 (547-617)||(28413982-28414052)
chr8 (559-613)||(34861191-34861245)
chr8 (547-620)||(13407437-13407510)
chr8 (547-588)||(13856508-13856549)
chr8 (551-588)||(16441830-16441867)
chr8 (548-613)||(23142937-23143002)
chr8 (478-611)||(45246481-45246613)
chr8 (577-613)||(1961403-1961439)
chr8 (428-540)||(8914768-8914880)
chr8 (427-499)||(35689595-35689667)
chr8 (546-614)||(45218629-45218695)
chr8 (553-604)||(6580950-6581001)
chr8 (561-612)||(8671078-8671129)
chr8 (547-614)||(23685131-23685198)
chr8 (552-603)||(28700564-28700615)
chr8 (543-613)||(9952866-9952936)
chr8 (567-613)||(11574164-11574210)
chr8 (476-613)||(17499234-17499368)
chr8 (553-603)||(33440624-33440674)
chr8 (547-620)||(34861300-34861371)
chr8 (569-619)||(38091488-38091538)
chr8 (547-620)||(31301109-31301182)
chr8 (425-506)||(41727424-41727505)
chr8 (559-619)||(43506533-43506590)
[»] scaffold0054 (1 HSPs)
scaffold0054 (510-619)||(30905-31014)
[»] scaffold0099 (1 HSPs)
scaffold0099 (476-584)||(27358-27468)
[»] scaffold0018 (1 HSPs)
scaffold0018 (477-611)||(27858-27991)
[»] scaffold0016 (1 HSPs)
scaffold0016 (559-613)||(204707-204761)
[»] scaffold0543 (1 HSPs)
scaffold0543 (547-588)||(9690-9731)
[»] scaffold0492 (1 HSPs)
scaffold0492 (547-588)||(11236-11277)
[»] scaffold0005 (2 HSPs)
scaffold0005 (553-613)||(296837-296897)
scaffold0005 (569-611)||(296974-297016)
[»] scaffold0204 (1 HSPs)
scaffold0204 (559-612)||(26862-26915)


Alignment Details
Target: chr3 (Bit Score: 340; Significance: 0; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 430 - 797
Target Start/End: Complemental strand, 38928190 - 38927823
Alignment:
Q  430 ggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccattt 529  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38928190 ggaatgctagcaacactatcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccattt 38928091  T
Q  530 ccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctttaaataattg 629  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38928090 ccaaagtgtaggtcttacattgatttcacccaataaaagagtgagtgttagagaaagtgatcaaaagagagtgttgctagcattcttctttaaataattg 38927991  T
Q  630 aacttttataaagttcaacgcattagtaatagaactctcaaattcttttaggaatttgagatgattcccatcctaaatataaatcacaacaacgttgaaa 729  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38927990 aacttttataaagttcaacgcattagtaatagaactctcaaattcttttaggaatttgagatgattcccatcctaaatataaatcacaacaatgttgaaa 38927891  T
Q  730 acaatgatcatgttgagaatgttcacatttattcaaactaataatatggataattgtcaagtaaacta 797  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38927890 acaataatcatgttgagaatgttcacatttattcaaactaataatatggataattgtcaagtaaacta 38927823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 38927827 - 38927630
Alignment:
Q  1 aactatacatatgagttcgctcaactttnnnnnnnnn--cattttaaacttgaaattatcactaagcaaataaaaattcaagtgcggtagagcatcaaag 98  Q
    ||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38927827 aactatacatatgagttcgctcaactttaaaaaaaaaaccattttaaacttgaaattatcactaagcaaataaaaattcaagtgcggtagagcatcaaag 38927728  T
Q  99 tgaaggaaaaggacttcgattgtgactttaatcattggtggagaaacccactacaatgtcgtggtaaaatgcatcatattcatgtgtgattttatagt 196  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38927727 tgaaggaaaaggacttcgattgtgacttcaatcattggtggagaaacccactacaatgtcgtggtaaaatgcatcatattcatgtgtgattttatagt 38927630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 428 - 614
Target Start/End: Complemental strand, 37600313 - 37600127
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||||||||||||||||||| ||||| ||||||| |  || ||||||||||||| |||||||||||| |||| | ||||||| ||||||||||    
T  37600313 gaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 37600214  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||| |||||||||||| | |||||| |||| |||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  37600213 ttctaaagtgtaggtcctacattgaattcaaccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctagcattc 37600127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 38927231 - 38927116
Alignment:
Q  195 gtagattaatctttttggcctttaatttcaaccaaataattttaccatttgaatattgttgaaatattaacattctttttgaagcgcataaaaattgtgt 294  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  38927231 gtagattaaactttttagcctttaatttcaaccaaataattctaccatttgaatattgttgaaatattaacattctttttggagcgcataaaaattgggt 38927132  T
Q  295 gtgtggtgttactagt 310  Q
    ||||||||||||||||    
T  38927131 gtgtggtgttactagt 38927116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 427 - 614
Target Start/End: Complemental strand, 10769909 - 10769722
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcca 526  Q
    |||||||||||| ||||||||||||||| ||||| ||||||  |   | ||||||||| ||| |||||||||||| |||| | |||||||||||||||||    
T  10769909 tgaggaatgctagcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgtatgtcccaccactttatatgggttcca 10769810  T
Q  527 tttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||| |||||||||||| | ||||||||||| | ||||||||||| |||| ||||||||||| |||||||||||||||  ||||||||    
T  10769809 tttctaaagtgtaggtcctacattgatttcatcaaataaaagagtaagtgctagagagagtgctcaaaagagagtgttattagcattc 10769722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 432 - 614
Target Start/End: Complemental strand, 54141072 - 54140890
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttcc 531  Q
    |||| |||||||||| ||||||| ||||| ||||||| | ||| || |||||||||| |||||||||||| |||| | ||||||  |||||||||||| |    
T  54141072 aatgttaacaacactttcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccactttacgtgggttccattttc 54140973  T
Q  532 aaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||  | ||||||||||| |||||||| ||||||||| |||||| |||| |||||||||||||||||||||||||    
T  54140972 aaagtgtaggttctacattgatttcatccaataaatgagtgagtgctagagaaagtgctcaaaagagagtgttgctagcattc 54140890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 426 - 611
Target Start/End: Original strand, 27243040 - 27243225
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    |||||| |||||| |||||||||||||||  |||| ||||||  | ||| ||||||||||| ||||||||||| || |||| | ||||||| ||||||||    
T  27243040 atgagggatgctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttcc 27243139  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||||||||||| | |   ||||||||| ||||||| | ||||||||| ||||| |||||| ||||||||||||||||||||||    
T  27243140 atttccaaagtgtatgacccacattgatttaacccaatgagagagtgagtattagaaagagtgttcaaaagagagtgttgctagca 27243225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 476 - 608
Target Start/End: Complemental strand, 24749045 - 24748913
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    |||||||| |||| | |||||||||| |||| | | ||||| ||||||||||||| |||||||||||| | ||||||||||| |||||||||||||||||    
T  24749045 tcttttatggggtgatatcaatgtatgtcccaccattttatgtgggttccatttctaaagtgtaggtcctacattgatttcatccaataaaagagtgagt 24748946  T
Q  576 gttagagagagtgatcaaaagagagtgttgcta 608  Q
    ||||||||||||| |||||||||||||||||||    
T  24748945 gttagagagagtgctcaaaagagagtgttgcta 24748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 513 - 614
Target Start/End: Complemental strand, 29775238 - 29775139
Alignment:
Q  513 ttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    |||| |||||||||||||||||||||||||| | | |||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||    
T  29775238 ttatgtgggttccatttccaaagtgtaggtcctaccttgatttcacccaataaaagagt--gtgctagagagagtgctcaaaagagagtgttgctagcat 29775141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 46237217 - 46237090
Alignment:
Q  440 caacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgta 539  Q
    ||||||||||||||| ||||| ||||||| | ||| ||||||||||| | |||||||||||| |||| | ||||||| ||||||||||||| ||| ||||    
T  46237217 caacactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaaatgta 46237118  T
Q  540 ggtcatgcattgatttcacccaataaaa 567  Q
    |||| | ||||||||||| |||||||||    
T  46237117 ggtcctacattgatttcatccaataaaa 46237090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 428 - 613
Target Start/End: Original strand, 24734702 - 24734886
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||| ||| |||||||| |||||   ||| |||||||||| ||| ||||||||||| | ||||||| |||| |||| | ||||| | ||||||| ||    
T  24734702 gaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaat 24734801  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    || ||||| ||||| |   || |||||| | ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  24734802 tttcaaagagtaggccca-caatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 24734886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 425 - 613
Target Start/End: Complemental strand, 41452081 - 41451894
Alignment:
Q  425 tatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttc 524  Q
    |||||||||| ||| |||||||| |||||   ||| |||||||||| ||| ||||||||||| | ||||||| |||| |||| | ||||| | |||||||    
T  41452081 tatgaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttc 41451982  T
Q  525 catttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
     |||| ||||| ||||  |   || |||||| | ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  41451981 aattttcaaagagtagaccca-caatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 41451894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 543 - 612
Target Start/End: Complemental strand, 27243116 - 27243047
Alignment:
Q  543 catgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27243116 catgcattgattttatccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttgctagcat 27243047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 547 - 619
Target Start/End: Original strand, 37600243 - 37600315
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||| ||||    
T  37600243 cattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctctt 37600315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 432 - 611
Target Start/End: Original strand, 13809083 - 13809261
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttcc 531  Q
    ||||||| ||||||||||||||   |||| ||||||   |||| ||||||||||| |||||||||||||| |||| | | ||||| ||||||||||||||    
T  13809083 aatgctagcaacactctcttttacacactctctctaac-ttcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttcc 13809181  T
Q  532 aaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||| || | |   ||||| ||| ||||||||| ||| ||| ||||||||| ||||  ||| | |||||||||||||||    
T  13809182 aaagtatatgacccacattgttttaacccaataagagaatgaatgttagagaaagtgtccaagaaagagtgttgctagca 13809261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 537 - 614
Target Start/End: Original strand, 20493548 - 20493625
Alignment:
Q  537 gtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||| ||| ||||||||||| |||||||| ||||||||||||||||||||| | ||||| |||||||||||||||||    
T  20493548 gtaggacatacattgatttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgttgctagcattc 20493625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 478 - 611
Target Start/End: Original strand, 20791343 - 20791475
Alignment:
Q  478 ttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgt 577  Q
    ||||||||| | |||||||||||| |||| | |||||||  | |||| ||||||||||||||| ||  ||| |||||| | ||||||| | ||||||| |    
T  20791343 ttttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatcc-gcaatgatttaaaccaataagaaagtgagtat 20791441  T
Q  578 tagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||||| ||||||||||||| ||||||||    
T  20791442 tagagagagtgttcaaaagagagtggtgctagca 20791475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 462 - 601
Target Start/End: Original strand, 357791 - 357928
Alignment:
Q  462 tctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcaccca 561  Q
    ||||||| | ||| |||||||||| |  ||||||||||||  | | | ||||||| |||||||||||||||||||||||  | | ||||||||||| |||    
T  357791 tctctagcactcactcttttattgagggaaatcaatgtatgcctcaccactttatgtgggttccatttccaaagtgtagtacctacattgatttcatcca 357890  T
Q  562 ataaaagagtgagtgttagagagagtgatcaaaagagagt 601  Q
    |||||| ||||||||  | |||||||| ||||||||||||    
T  357891 ataaaaaagtgagtg--atagagagtgttcaaaagagagt 357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 10769838 - 10769905
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||| |||||||||||  ||| ||||||||||| |||||||||||||||||||||||||    
T  10769838 cattgatttcaccaaataaaagagtcggtgatagagagagtgctcaaaagagagtgttgctagcattc 10769905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 28529320 - 28529253
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| |||||||||||||||||| ||||||||||| | ||||| |||||||||||||||||    
T  28529320 cattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattc 28529253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 605
Target Start/End: Original strand, 28529246 - 28529424
Alignment:
Q  424 atatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggtt 523  Q
    ||||||||||||||| |||||||| |||||   |||| ||||||| | ||| ||||||||||| | |||||||||||| |||| | ||  | | ||||||    
T  28529246 atatgaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccac--tgtgtgggtt 28529343  T
Q  524 ccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttg 605  Q
    | |||| ||||||||| | |   || |||||| | ||||||| ||||||||| |||||||| ||| ||||||||||||||||    
T  28529344 caattttcaaagtgta-gacccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttg 28529424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 547 - 608
Target Start/End: Original strand, 46237159 - 46237220
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgcta 608  Q
    ||||||||||| ||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  46237159 cattgatttcatccaataaaagagtgattgctagagagagtgctcaaaagagagtgttgcta 46237220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 451 - 607
Target Start/End: Complemental strand, 43657156 - 43657000
Alignment:
Q  451 tttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcatt 550  Q
    |||| ||||| ||||||| | ||| | ||||||| | | |||||||||||| |||| | ||||||| || |||||||||||||||||||||||   ||||    
T  43657156 tttgagcactttctctagcactcactattttatttgatgaaatcaatgtatgtcccaccactttatgtgagttccatttccaaagtgtaggtctcacatt 43657057  T
Q  551 gatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgct 607  Q
    | ||||||| ||||||| | | ||| ||| ||| |||  |||||| |||||||||||    
T  43657056 gttttcaccaaataaaaaaattagtattaaagaaagtactcaaaatagagtgttgct 43657000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 5452173 - 5452240
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||||||||| ||||| |||||||| | ||||| |||||||||||||||||    
T  5452173 cattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgttgctagcattc 5452240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 426 - 529
Target Start/End: Complemental strand, 21232707 - 21232604
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    ||||||||||||| |||||| |||||||| ||||| ||| ||| | ||| | ||||||||||| |||||||||||| | || | ||||||| ||||||||    
T  21232707 atgaggaatgctagcaacaccctcttttgagcactttctttagcactcatttttttattgggtgaaatcaatgtatgttccaccactttatgtgggttcc 21232608  T
Q  526 attt 529  Q
    ||||    
T  21232607 attt 21232604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 426 - 613
Target Start/End: Complemental strand, 37776888 - 37776702
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    ||||||||||||| |||||||| |||||   |||| |||| || | ||| ||||||||| | | |||||||||||| |||  | ||||| | |||||||     
T  37776888 atgaggaatgctagcaacactcacttttcaacactttctccagcactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttca 37776789  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||| ||||||||| | | | || |||||| | ||| ||| ||||||||| |||||||| ||| ||| || |||||||||||||||||    
T  37776788 attttcaaagtgta-gacctacaatgatttaaaccactaagagagtgagtattagagagggtgttcataaaagagtgttgctagcatt 37776702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 618
Target Start/End: Complemental strand, 52951443 - 52951372
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttct 618  Q
    ||||||||||| ||||| | ||||||||| || ||||||||| | |||||||||||||||||||||||||||    
T  52951443 cattgatttcatccaatgatagagtgagtatttgagagagtgttaaaaagagagtgttgctagcattcttct 52951372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 547 - 605
Target Start/End: Original strand, 54141006 - 54141064
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttg 605  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||    
T  54141006 cattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagaaagtgttg 54141064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 619
Target Start/End: Complemental strand, 46161018 - 46160944
Alignment:
Q  543 catgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||| |||||||||| |||||||||||||||||| |  |||||||| ||||||| ||||||||||||||||| ||||    
T  46161018 catgtattgatttcatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagcattcctctt 46160944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 612
Target Start/End: Original strand, 50661631 - 50661700
Alignment:
Q  543 catgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    ||||||||||||| | | ||||||||||| |||||||||||||||| | |||||||||||||||| ||||    
T  50661631 catgcattgattttatctaataaaagagtaagtgttagagagagtgtttaaaagagagtgttgcttgcat 50661700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 428 - 613
Target Start/End: Complemental strand, 5452243 - 5452061
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| |||||||| |||||   |||| ||| ||  ||||| ||||||||||| | |||||||||||| |||| | ||||| | ||| ||| ||    
T  5452243 gaggaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaat 5452144  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    || | ||||||||  |   ||  ||||| |  |||||| |||| |||| || ||||||||| ||||||||||||||||||||||||    
T  5452143 tttctaagtgtagacc---caaggatttaaatcaataagagagcgagtattggagagagtgttcaaaagagagtgttgctagcatt 5452061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 21232635 - 21232702
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||||||||||| | |||||| || ||| |||| ||||||||| |||||||||||||||    
T  21232635 cattgatttcacccaataaaaaaatgagtgctaaagaaagtgctcaaaagagggtgttgctagcattc 21232702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 550 - 613
Target Start/End: Complemental strand, 52124018 - 52123955
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||| | ||||||| | ||||||| |||||||||||| ||||||||||||||||||||||||    
T  52124018 tgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 52123955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 578
Target Start/End: Complemental strand, 50661657 - 50661555
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    ||||||||| | ||||||||||| || |||| | ||||||| ||||||||||||||||| |||| | |   ||||||||| |||||||||||||  ||||    
T  50661657 tcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatgtatgacccacattgatttaacccaataaaagaaagagt 50661558  T
Q  576 gtt 578  Q
    |||    
T  50661557 gtt 50661555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 611
Target Start/End: Original strand, 52951475 - 52951537
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||| ||||| | |||||||||| ||||||||||| | ||||||||||||||||||||    
T  52951475 ttgatttcatccaatgagagagtgagtgctagagagagtgttaaaaagagagtgttgctagca 52951537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 476 - 613
Target Start/End: Complemental strand, 29588868 - 29588732
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    ||||||||||| |||||||||||||| ||| |  ||||||| || |||| |||| ||||||||||  |   || |||||| |  |||||| |||||||||    
T  29588868 tcttttattggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagaccca-caatgatttaaatcaataagagagtgagt 29588770  T
Q  576 gttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||| |||||||| |||||||||| | || ||||||||    
T  29588769 gttatagagagtgttcaaaagagaattttactagcatt 29588732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 537 - 614
Target Start/End: Original strand, 37776806 - 37776883
Alignment:
Q  537 gtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||| ||| ||||||||||| | |||||||||||||||| | |||| |||| | ||||| |||||||||||||||||    
T  37776806 gtaggacatacattgatttcatctaataaaagagtgagtgctggagaaagtgttgaaaagtgagtgttgctagcattc 37776883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 500
Target Start/End: Original strand, 37600120 - 37600196
Alignment:
Q  424 atatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||| |  || ||||||||||| | || ||||||||    
T  37600120 atatgaggaatgctagcaacactctcttttgagcactctctctagcacccactcttttattggttgaattcaatgta 37600196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 613
Target Start/End: Original strand, 40715969 - 40716041
Alignment:
Q  541 gtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||| |||| ||||||||  ||||||||||||||| ||||||||||| | ||||| ||||||||||| ||||    
T  40715969 gtcatacattaatttcaccatataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctaacatt 40716041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 619
Target Start/End: Complemental strand, 46576015 - 46575943
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    ||||| ||||| ||||||| |||||||||||| ||||||||| | || ||||||||||| |||||||| ||||    
T  46576015 cattggtttcagccaataagagagtgagtgtttgagagagtgttgaagagagagtgttgatagcattcctctt 46575943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 54140887 - 54140959
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||| ||||||||||||||| ||||| ||||||| | ||| || |||||||| | |||||||||||    
T  54140887 gaggaatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgta 54140959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 552 - 603
Target Start/End: Complemental strand, 29235709 - 29235658
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    |||||||||||||| |||||||||||||||||||||| |  |||||||||||    
T  29235709 atttcacccaataagagagtgagtgttagagagagtgttagaaagagagtgt 29235658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 29389126 - 29389193
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||| |  |||| ||||||||||||||| || ||||| ||||||| |||||||||||||||||    
T  29389126 cattgattttattcaatgaaagagtgagtgttaaagtgagtgctcaaaagtgagtgttgctagcattc 29389193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 426 - 496
Target Start/End: Original strand, 29775134 - 29775202
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaa 496  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||| |  || ||||||||||||| |||||||    
T  29775134 atgaggaatgctagcaacactctcttttgagcactctctctagca--cactcttttattgggtgaaatcaa 29775202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 614
Target Start/End: Complemental strand, 30624685 - 30624633
Alignment:
Q  560 caataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||||||||  || ||||||| |||||||||||||||||    
T  30624685 caataaaagagtgagtgttagagag--tgctcaaaagtgagtgttgctagcattc 30624633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 13809148 - 13809083
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||| | |||||||||||||||  |||||||||||||   ||||||||||||||||||||||    
T  13809148 cattgattttatccaataaaagagtgaa-gttagagagagtgtgtaaaagagagtgttgctagcatt 13809083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 613
Target Start/End: Original strand, 24749023 - 24749089
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||| |||||| |||||||| |||||||||||||||| | |||||||||| | |||||| ||||    
T  24749023 cattgatatcaccccataaaagaatgagtgttagagagagcgttcaaaagagaatattgctaacatt 24749089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 478 - 611
Target Start/End: Original strand, 14236066 - 14236198
Alignment:
Q  478 ttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgt 577  Q
    ||||||||| | |||||||| ||| |||| | |||||||  | |||| ||||||||||||||| ||   || | ||||   ||||||||| ||||||| |    
T  14236066 ttttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatcca-caataatttagaccaataaaaaagtgagtat 14236164  T
Q  578 tagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||| |||||| |||||| |||||||||||||||    
T  14236165 tagaaagagtgttcaaaacagagtgttgctagca 14236198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 605
Target Start/End: Complemental strand, 20493628 - 20493452
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| |||||||| |||||   |||| ||||||  | ||| || |||||||| | |||||||||||| |||  | ||||| |  |||||| ||    
T  20493628 gaggaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaat 20493529  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttg 605  Q
     | ||||||||||  |   || |||||| | ||||||| |||||||||  ||||||||||| ||||||||||||||||    
T  20493528 attcaaagtgtagaccca-caatgatttaaaccaataagagagtgagtaatagagagagtgttcaaaagagagtgttg 20493452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 500
Target Start/End: Original strand, 38928006 - 38928075
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    |||||||| |||||||||||||||  |||| ||||||  | ||| ||||||||||||| |||||||||||    
T  38928006 gaatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaatgta 38928075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 588
Target Start/End: Original strand, 46156741 - 46156778
Alignment:
Q  551 gatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  46156741 gatttcacccaataaaagagtgagtgttaaagagagtg 46156778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 620
Target Start/End: Original strand, 46575945 - 46576135
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| ||||||||||| ||   |||| |||| |  | ||| ||| ||||||| | ||| |||||||| |||| | ||||| | ||||||||||    
T  46575945 gaggaatgctatcaacactctctcttcaacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttccat 46576044  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    || |||| |||| | |   ||||||||| |||| || | ||||||||| ||| |||||||| | |||  ||||||||||||||| | ||||||    
T  46576045 tttcaaaatgtacgccccacattgatttaaccctattagagagtgagtattaaagagagtgttgaaa--agagtgttgctagcactattcttt 46576135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 603
Target Start/End: Original strand, 54187050 - 54187099
Alignment:
Q  554 ttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    |||||||||||| |||||||||||||||||||||| |  |||||||||||    
T  54187050 ttcacccaataagagagtgagtgttagagagagtgttagaaagagagtgt 54187099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 10769719 - 10769791
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    |||||||||||| |||||||||||||| ||||| ||||||| | | | ||||||||| | | |||||||||||    
T  10769719 gaggaatgctaataacactctcttttgagcactctctctagcacttactcttttatttgatgaaatcaatgta 10769791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 604
Target Start/End: Complemental strand, 13639464 - 13639412
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    |||||| ||||||||||||||| |||||||||||||| |  ||||||||||||    
T  13639464 atttcatccaataaaagagtgactgttagagagagtgttagaaagagagtgtt 13639412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 46450132 - 46450067
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||| || | |||||||||||||||| ||||||| ||  ||||||| |||||||||||||||||    
T  46450132 cattgattccatctaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagcattc 46450067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 604
Target Start/End: Original strand, 48543262 - 48543314
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    |||||||||||||| |||||||||||| ||||||||| |  ||||||||||||    
T  48543262 atttcacccaataagagagtgagtgttggagagagtgttagaaagagagtgtt 48543314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 15790454 - 15790370
Alignment:
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    |||| ||||||||||| |||  | |||||| | ||||||| ||||||||| ||||||||| |  |||||| ||||||||||||||||    
T  15790454 attttcaaagtgtaggccat--aatgatttaaaccaataagagagtgagtattagagagattattcaaaaaagagtgttgctagcat 15790370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 20791363 - 20791296
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||| |||||||| || ||||||||  |||||| ||  |||||||||||||    
T  20791363 cattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaacgttgctagcattc 20791296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 620
Target Start/End: Complemental strand, 24734770 - 24734699
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||||||||| |||||||||||||||||  ||||||  ||| | ||||| |||||||||||| |||| |||||    
T  24734770 ttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattcctcttt 24734699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 38928122 - 38928189
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||| ||||||||||||| ||| |  |||||| ||||  ||||||| ||||||||||||||||    
T  38928122 cattgattttacccaataaaagactgaatactagagatagtgcacaaaagatagtgttgctagcattc 38928189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 613
Target Start/End: Original strand, 44844100 - 44844163
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||| | ||||||||| ||||||||||||||||||||   |||||||||| |||||| ||||    
T  44844100 tgatttaatccaataaaaaagtgagtgttagagagagtgtcaaaaagagagtcttgctatcatt 44844163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 45515608 - 45515675
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||| |||||||||| ||||||||| | ||||| ||| |||| || |||||    
T  45515608 cattgatttcatccaataaaatagtgagtgttggagagagtgttaaaaagtgagcgttgttaacattc 45515675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 588
Target Start/End: Original strand, 26310559 - 26310600
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  26310559 cattgatttcatccaataaaagagtaagtgctagagagagtg 26310600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 620
Target Start/End: Original strand, 30624746 - 30624807
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||||||| ||||| |||||||||||  ||| |||||| |||||||||||  |||||||||||    
T  30624746 ccaataagagagtaagtgttagagatggtgctcaaaaaagagtgttgctgacattcttcttt 30624807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 585
Target Start/End: Original strand, 37926580 - 37926685
Alignment:
Q  480 ttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgtta 579  Q
    ||||| ||| |||||||||||  |||  ||||||||| ||||  |||||| |||||||  || | | ||||||||| |||||| || ||||| |||||||    
T  37926580 ttattaggtgaaatcaatgtaggtcctactactttatgtgggacccattttcaaagtgcgggacctacattgatttaacccaacaagagagtaagtgtta 37926679  T
Q  580 gagaga 585  Q
    ||||||    
T  37926680 gagaga 37926685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 614
Target Start/End: Original strand, 41452010 - 41452075
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||| |||||||||||||||||  ||||||  ||| | ||||| |||||||||||| ||||    
T  41452010 ttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattc 41452075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 596
Target Start/End: Original strand, 41707552 - 41707601
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaag 596  Q
    ||||||||| | ||||| | |||||||||||||||||||||| |||||||    
T  41707552 cattgattttatccaatgagagagtgagtgttagagagagtgctcaaaag 41707601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 613
Target Start/End: Original strand, 50320541 - 50320594
Alignment:
Q  560 caataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||| ||||||||||||||||||||||| |  ||||| |||||| ||||||||    
T  50320541 caatagaagagtgagtgttagagagagtgctagaaagaaagtgttcctagcatt 50320594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 6e-61; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 426 - 621
Target Start/End: Original strand, 11430436 - 11430630
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    ||||||||||||||||||||||||||||| ||||| | ||||| | ||| ||||||||||||| |||||||||||| |||| | ||||||| ||||||||    
T  11430436 atgaggaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcc 11430535  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttta 621  Q
    |||||||||||||||||| | |||||| |||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  11430536 atttccaaagtgtaggtcctacattgaattca-ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctcttta 11430630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 426 - 612
Target Start/End: Original strand, 11135734 - 11135920
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||| | ||| | ||||||||||| |||||||||||| |||| | ||||||| ||||||||    
T  11135734 atgaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcc 11135833  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  11135834 atttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctagagagagtcctcaaaagagagtgttgctagcat 11135920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 426 - 621
Target Start/End: Complemental strand, 32848768 - 32848573
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    |||||||||||||||||||||||||||||  |||| ||||||| | ||| ||||||||||||| |||||| ||||| |||| | ||||||| ||| ||||    
T  32848768 atgaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattcc 32848669  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttta 621  Q
    |||| ||||||||||||| | |||||| |||| ||||||||||||| |||| |||||| |||| |||||||||||||||||||||| || ||||||    
T  32848668 attttcaaagtgtaggtcctacattgaattcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcagtcctcttta 32848573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 432 - 614
Target Start/End: Complemental strand, 41095788 - 41095606
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttcc 531  Q
    ||||||| ||||||||||||||| ||||| ||||||| | ||| || |||||||||| |||||||||||| ||||   ||| | | |||||||||||| |    
T  41095788 aatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccattttc 41095689  T
Q  532 aaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||| | ||||||||||||||||||||  |||||||| ||||||||||| |||||||||||||||||||||||||    
T  41095688 aaagtgtaggtcctacattgatttcacccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 41095606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 428 - 614
Target Start/End: Complemental strand, 14094184 - 14093998
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| | ||| | |||||||  |||| |||| || | ||| | ||||||||||| |||||||||||| |||| | ||||||| ||||||||||    
T  14094184 gaggaatgctagcgacattatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 14094085  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||| | |||||||||||| |||| ||| ||||||||||| | |||||| ||||||||||||||||||| |||||    
T  14094084 ttccaaagtgtaggtcctacattgatttcactcaatcaaaaagtgagtgttacaaagagtgttcaaaagagagtgttgctaacattc 14093998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 431 - 576
Target Start/End: Original strand, 41917995 - 41918140
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttc 530  Q
    |||||||| ||||||||||||||| ||||  ||||||| | ||| ||||||||||||| |||||||||||| |||| | ||||||| ||| ||||||||     
T  41917995 gaatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccatttt 41918094  T
Q  531 caaagtgtaggtcatgcattgatttcacccaataaaagagtgagtg 576  Q
    ||||||||||||| | ||||||||| ||||||||||||||||||||    
T  41918095 caaagtgtaggtcctacattgattttacccaataaaagagtgagtg 41918140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 476 - 614
Target Start/End: Complemental strand, 13388474 - 13388334
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatg--ggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtga 573  Q
    ||||||||||||| |||||||||||| || | | ||||||||||  |||| ||||| ||||||||||||  | ||||||||||| ||||||||| |||||    
T  13388474 tcttttattgggtgaaatcaatgtatgtctcaccactttatatgtgggtttcattttcaaagtgtaggtactacattgatttcatccaataaaaaagtga 13388375  T
Q  574 gtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  13388374 gtgttagagagagtattcaaaagagagtgttgctagcattc 13388334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 476 - 619
Target Start/End: Original strand, 29418526 - 29418670
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaat-aaaagagtgag 574  Q
    ||||||||||| |||||| |||||||||| | | ||||||| || |||| ||||||||||||||| || | ||||||||||||||||| |||| ||||||    
T  29418526 tcttttattggataaaattaatgtatatctcaccactttatgtgagttctatttccaaagtgtagatcctacattgatttcacccaataaaaaaagtgag 29418625  T
Q  575 tgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    || || ||||||||||||||||||| |||||||||||||| ||||    
T  29418626 tgatatagagagtgatcaaaagagactgttgctagcattcctctt 29418670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 476 - 613
Target Start/End: Complemental strand, 50773246 - 50773109
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    ||||||||||| |||||||||| ||| | || | ||||||| ||||||||||||||||| | |||||| | |||| |||| ||||||||||||| |||||    
T  50773246 tcttttattggataaaatcaatatatgttccaccactttatgtgggttccatttccaaaatataggtcctacattaattttacccaataaaagaatgagt 50773147  T
Q  576 gttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    | ||||||||||| |||||||||||| |||||||||||    
T  50773146 gctagagagagtgttcaaaagagagtattgctagcatt 50773109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 432 - 611
Target Start/End: Complemental strand, 13114849 - 13114670
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttcc 531  Q
    ||||||| | |||||||||||||  |||| ||||||  | ||| ||||||||| | |||||||||| ||| |||| | ||||||||||| ||||||||||    
T  13114849 aatgctagcgacactctcttttggacactctctctaacactcactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttcc 13114750  T
Q  532 aaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||| ||||   |   ||||||||| ||||||| | | ||||||||||||||||||||  |||||||||||||||||||||    
T  13114749 aaaatgtataacccacattgatttaacccaatgagatagtgagtgttagagagagtgtccaaaagagagtgttgctagca 13114670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 547 - 619
Target Start/End: Complemental strand, 41918062 - 41917990
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  41918062 cattgatttcacccaataaaagagtgagtgctagagagggtgctcaaaagagagtgttgctagcattcttctt 41917990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 490 - 583
Target Start/End: Complemental strand, 24436588 - 24436495
Alignment:
Q  490 aaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagaga 583  Q
    ||||||||||||||||| | ||||||| ||||||| |||| |||||||| |||| | |||||||||||||||||||||||| ||||||||||||    
T  24436588 aaatcaatgtatatcccaccactttatgtgggttctattttcaaagtgtgggtcctacattgatttcacccaataaaagagggagtgttagaga 24436495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 478 - 619
Target Start/End: Original strand, 43832316 - 43832457
Alignment:
Q  478 ttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgt 577  Q
    |||||||| |||| |||||| |||||| |  |||||||| |||||| |||||||||||||||| || | |||||||||| || ||||||||||||| ||     
T  43832316 ttttattgagtaagatcaatatatatctcattactttatgtgggtttcatttccaaagtgtagatcctacattgatttcgccgaataaaagagtgaatgc 43832415  T
Q  578 tagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||| |||||| |||||||||||| ||| || ||||| ||||    
T  43832416 tagaaagagtgttcaaaagagagttttgatatcattcctctt 43832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 11135806 - 11135739
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  11135806 cattgatttcacccaataaaatagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 11135739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 476 - 611
Target Start/End: Complemental strand, 50425001 - 50424866
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    ||||||||||| ||||||||||  ||| ||| | ||||||| |  ||||||||||||||||||| | |   ||||||||| ||||||||||| ||||| |    
T  50425001 tcttttattggataaaatcaatccataccccaccactttatgtaagttccatttccaaagtgtatgacccacattgatttaacccaataaaaaagtgaat 50424902  T
Q  576 gttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||||||||||   ||||||||||||||||||||    
T  50424901 gttagagagagtgcctaaaagagagtgttgctagca 50424866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 547 - 613
Target Start/End: Original strand, 41095722 - 41095788
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  41095722 cattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 41095788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 488 - 619
Target Start/End: Complemental strand, 30679034 - 30678904
Alignment:
Q  488 taaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtagg-tcatgcattgatttcacccaataaaagagtgagtgttagagagag 586  Q
    |||||||||||||| |||| | ||||| | ||||||| |||| ||||||||||  |||  || |||||| | ||||||| ||||||||||||||||||||    
T  30679034 taaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactca--caatgatttaagccaataagagagtgagtgttagagagag 30678937  T
Q  587 tgatcaaaagagagtgttgctagcattcttctt 619  Q
    || |||||| |||||||||||||||||| ||||    
T  30678936 tgctcaaaaaagagtgttgctagcattcctctt 30678904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 476 - 603
Target Start/End: Original strand, 15660938 - 15661063
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    ||||||||||| ||||||||||| || |||| | |||||||  |||||  ||||||||| |||| | ||  ||||||||| ||||||||| |||||||||    
T  15660938 tcttttattggataaaatcaatgcatgtcccaccactttatgcgggttttatttccaaaatgtatgaca--cattgatttaacccaataatagagtgagt 15661035  T
Q  576 gttagagagagtgatcaaaagagagtgt 603  Q
    |||||||||||||  |||||||||||||    
T  15661036 gttagagagagtgtccaaaagagagtgt 15661063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 550 - 614
Target Start/End: Original strand, 32848699 - 32848763
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  32848699 tgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgttgttagcattc 32848763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 11430508 - 11430441
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||    
T  11430508 cattgatttcacccaataaaagagtgagtgctagaaagagtgctcaaaagagagtgttgttagcattc 11430441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 431 - 611
Target Start/End: Complemental strand, 19101781 - 19101602
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttc 530  Q
    |||||||| ||||| || ||||||  |||| ||| ||| | ||| | ||||||||| | |||||||||||| |||| | |||||||  | |||| ||||     
T  19101781 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttt 19101682  T
Q  531 caaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||||||| || |||| |||||| | ||||||| | ||||||| |||||||||||| ||||||||||||  ||||||||    
T  19101681 caaagtgtagatc-tgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtagtgctagca 19101602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 448 - 614
Target Start/End: Original strand, 28109885 - 28110050
Alignment:
Q  448 tcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgc 547  Q
    ||||||| ||||| ||||||| | ||| | ||||||||||| ||||||||| || | || | | ||||| ||||||||||||| ||||||||| || |      
T  28109885 tcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgcatgttccaccattttatgtgggttccatttc-aaagtgtagatcctag 28109983  T
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    | |||||||| ||||||||| ||||||| ||||||| |||  | ||||||||||||| ||| |||||    
T  28109984 aatgatttcatccaataaaaaagtgagtattagagaaagtacttaaaagagagtgttcctaacattc 28110050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 427 - 529
Target Start/End: Complemental strand, 43851219 - 43851117
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcca 526  Q
    ||||||||| || ||||||||||||||  || |  ||||||||| ||| || |||||||||| |||||||||||| |||| | |||||||||||||||||    
T  43851219 tgaggaatgttagcaacactctcttttaagcgcactctctagtactcactcatttattgggtgaaatcaatgtatgtcccaccactttatatgggttcca 43851120  T
Q  527 ttt 529  Q
    |||    
T  43851119 ttt 43851117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 547 - 611
Target Start/End: Original strand, 4578690 - 4578752
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||    
T  4578690 cattgatttcacccaataaaagagtgagtgtt--agagagtgttgaaaagagagtgttgctagca 4578752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 537 - 614
Target Start/End: Complemental strand, 9165379 - 9165302
Alignment:
Q  537 gtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||| ||| ||||||||||||||||||||||||||||||  ||| |||||| |||||||||||||| | ||||||||    
T  9165379 gtaggacatacattgatttcacccaataaaagagtgagtgcaagatagagtggtcaaaagagagtgtggatagcattc 9165302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 44739185 - 44739112
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    |||| ||||||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||| ||||| |||||    
T  44739185 cattaatttcactcaagaaaagagtgagtgctagagagagtgttcaaaagagagtgttgctaacattcctcttt 44739112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 548 - 620
Target Start/End: Complemental strand, 25543406 - 25543334
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    |||||||||| | ||||||||||| |||||||||||||||| | ||||| ||||||||||||||||| |||||    
T  25543406 attgatttcatcaaataaaagagtaagtgttagagagagtgtttaaaagtgagtgttgctagcattcctcttt 25543334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 613
Target Start/End: Complemental strand, 41948300 - 41948145
Alignment:
Q  457 cactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttc 556  Q
    |||||| |||| || ||| ||||||||||| |||||||||||||||| |  | ||||| | | ||||| |||| |||||||||  ||   || ||||||     
T  41948300 cactatttctaatactcactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatcca-caatgattta 41948202  T
Q  557 acccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |  |||||| |||||||||||||||||||||| |||||||||| | |||||||||||    
T  41948201 aatcaataagagagtgagtgttagagagagtgttcaaaagagaatattgctagcatt 41948145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 613
Target Start/End: Original strand, 13114784 - 13114849
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||| | | ||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  13114784 attgattttatctaataaaagagtgagtgttagagagagtgtccaaaagagagtgtcgctagcatt 13114849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 613
Target Start/End: Original strand, 8899101 - 8899195
Alignment:
Q  518 tgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||| |||| |||||||||||||   || | |||| | ||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||    
T  8899101 tgggttcaattttcaaagtgtaggtcca-caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagattgttgctagcatt 8899195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 14094114 - 14094181
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||||||||||| |||||||| | ||||||||| |||||||| | ||| ||||||||||    
T  14094114 cattgatttcacccaataaaaaagtgagtgctggagagagtgttcaaaagataatgtcgctagcattc 14094181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 26980375 - 26980442
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||| ||||||||| |||||||||||| | ||||| |||||||| ||||||||    
T  26980375 cattgatttcatccaataatagagtgagtattagagagagtgttgaaaagtgagtgttgttagcattc 26980442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 428 - 543
Target Start/End: Original strand, 44739115 - 44739230
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    |||||||| || |||||||||||||||  |||| ||||||| | ||| |||||| ||| || |||| ||||||| |||| | ||||||| || |||  ||    
T  44739115 gaggaatgttagcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccactttatgtgagttgtat 44739214  T
Q  528 ttccaaagtgtaggtc 543  Q
    ||||||||||||||||    
T  44739215 ttccaaagtgtaggtc 44739230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 614
Target Start/End: Original strand, 6133738 - 6133804
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||| |||||||||| ||||||| |||||||| || | ||||| |||||||||||||||||    
T  6133738 attgatttcatccaataaaagggtgagtgctagagagattgttgaaaagtgagtgttgctagcattc 6133804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 426 - 500
Target Start/End: Complemental strand, 11135927 - 11135853
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    |||||| |||||| ||||||||||||||| | ||| ||||||| | ||| ||||||||||||| |||||||||||    
T  11135927 atgagggatgctagcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgta 11135853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 543 - 597
Target Start/End: Complemental strand, 28109939 - 28109885
Alignment:
Q  543 catgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaaga 597  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||| ||||||||    
T  28109939 catgcattgatttcacccaataaaaaagtgagtgctagagaaagtgctcaaaaga 28109885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 549 - 614
Target Start/End: Original strand, 39039470 - 39039535
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||| |||||||||||||||||| || | |||||| | ||||| |||||||||||||||||    
T  39039470 ttgatttcatccaataaaagagtgagtgctaaaaagagtgttgaaaagtgagtgttgctagcattc 39039535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 617
Target Start/End: Original strand, 3872760 - 3872816
Alignment:
Q  561 aataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttc 617  Q
    |||| ||||||||||| ||||||||||| | ||||| ||||||||||||||||||||    
T  3872760 aatagaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattcttc 3872816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 588
Target Start/End: Complemental strand, 24886099 - 24886063
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtg 588  Q
    |||||||||||||||||||||||||||||||||||||    
T  24886099 atttcacccaataaaagagtgagtgttagagagagtg 24886063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 612
Target Start/End: Complemental strand, 26980445 - 26980262
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    |||||||||||||||||||| |||||   |||| |||||| || ||| ||| ||||||| | |||||||||||| |||| | | ||| | || |||| ||    
T  26980445 gaggaatgctaacaacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaat 26980346  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    || |||| | ||  ||   || |||||| |  |||||| ||||||||| ||| |||||||| | |||||||||||||||||||||    
T  26980345 tttcaaaatatacatcca-caatgatttaaatcaataagagagtgagtattatagagagtgttgaaaagagagtgttgctagcat 26980262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 41095603 - 41095675
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||| ||||||||||||||| ||||| ||||||| | ||| |  |||||||||| |||||||||||    
T  41095603 gaggaatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgta 41095675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 608
Target Start/End: Original strand, 50773225 - 50773285
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgcta 608  Q
    |||||||| | ||||||||||||||||||||||||||||   |||||| ||||||||||||    
T  50773225 attgattttatccaataaaagagtgagtgttagagagagcagtcaaaatagagtgttgcta 50773285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 19101714 - 19101781
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||| |||||||| || ||||||||  |||||| || ||||||||||||||    
T  19101714 cattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 19101781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 431 - 611
Target Start/End: Original strand, 22540368 - 22540543
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttc 530  Q
    |||||||| ||||| || ||||||  |||| ||| ||| | ||| | ||||||||| | |||||||||||| |||| | |||||||  | |||| |||||    
T  22540368 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 22540467  T
Q  531 caaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||||||| ||  ||| |||||| | ||||||    ||| ||| ||| |||||||| ||||||||||||| ||||||||    
T  22540468 caaagtgtagatc-cgcaatgatttaaaccaata----agttagtattaaagagagtgttcaaaagagagtggtgctagca 22540543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 22540435 - 22540368
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||| |||||||| || ||||||||  |||||| || ||||||||||||||    
T  22540435 cattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 22540368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 43851148 - 43851215
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||| ||||||||  ||||||| | | | ||||||||||||||||| |||||    
T  43851148 cattgatttcacccaataaatgagtgagtactagagagtgcgcttaaaagagagtgttgctaacattc 43851215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 18157105 - 18157039
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||| |||||| ||||||||| |||| ||||||||||||||| | ||||||||||||  ||||||||    
T  18157105 cattaatttcatccaataaaaaagtgggtgttagagagagtgttgaaaagagagtgtccctagcatt 18157039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 603
Target Start/End: Complemental strand, 28274847 - 28274797
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    ||||| ||||||| |||||||||||||||||||||| | ||||||||||||    
T  28274847 tttcatccaataagagagtgagtgttagagagagtgttgaaaagagagtgt 28274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 476 - 588
Target Start/End: Complemental strand, 4578712 - 4578599
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc-atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgag 574  Q
    ||||||||||||| |||||||||||  |||| | |||||||  ||| ||| |||||||||||||||| |   |||||||||||||||| || |||| | |    
T  4578712 tcttttattgggtgaaatcaatgtaggtcccaccactttatgcggggtcccatttccaaagtgtaggacccacattgatttcacccaaaaagagagcggg 4578613  T
Q  575 tgttagagagagtg 588  Q
    |||||  |||||||    
T  4578612 tgttacggagagtg 4578599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 614
Target Start/End: Original strand, 13889289 - 13889326
Alignment:
Q  577 ttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||| |||||||||||||||||||||||||    
T  13889289 ttagagagagtgttcaaaagagagtgttgctagcattc 13889326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 11430626 - 11430555
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||| ||||||||||||||| ||||| ||||||| | ||| ||||||||| ||| || ||||||||    
T  11430626 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttatt-ggtgaattcaatgta 11430555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 550 - 614
Target Start/End: Original strand, 21466687 - 21466751
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||| ||||||||| |||||||| || ||||||||  |||||| || ||||||||||||||    
T  21466687 tgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 21466751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 613
Target Start/End: Original strand, 24886159 - 24886219
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||||  |||||||||||||||||||||| |  ||||||||||||  |||||||    
T  24886159 tttcacccaataggagagtgagtgttagagagagtgctagaaagagagtgttcttagcatt 24886219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 613
Target Start/End: Original strand, 29068200 - 29068260
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||| ||||||  |||||||||||||||||||||| |  |||||||||||| ||||||||    
T  29068200 tttcatccaataggagagtgagtgttagagagagtgctagaaagagagtgttcctagcatt 29068260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 39019636 - 39019575
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||      ||||||| ||||||||| | |||||||||||||||||||||||    
T  39019636 cattgatttcacccaataa------gagtgtttgagagagtgttgaaaagagagtgttgctagcattc 39019575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 567 - 611
Target Start/End: Original strand, 39019702 - 39019746
Alignment:
Q  567 agagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  39019702 agagtgagtattagagaaagtgttcaaaagagagtgttgctagca 39019746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 585
Target Start/End: Complemental strand, 50308822 - 50308786
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagaga 585  Q
    |||||||||||||||||||||||||||| ||||||||    
T  50308822 ttgatttcacccaataaaagagtgagtgctagagaga 50308786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 500
Target Start/End: Original strand, 50773109 - 50773177
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||| ||| |||||||||||  |||| ||||||| | ||| |||||||||||||||||| ||||||    
T  50773109 aatgctagcaatactctcttttgaacactctctctagcactcattcttttattgggtaaaattaatgta 50773177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 15523277 - 15523210
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||| |||||||| || ||||||||  |||||| || ||||| ||||||||    
T  15523277 cattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgatagcattc 15523210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 15531271 - 15531204
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||| |||||||| || ||||||||  |||||| || ||||| ||||||||    
T  15531271 cattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgatagcattc 15531204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 16948581 - 16948522
Alignment:
Q  560 caataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||| ||||||||| ||||||| | || |||| |||||||||||||||||||| ||||    
T  16948581 caataagagagtgagtattagagaaaatgttcaacagagagtgttgctagcattcctctt 16948522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 588
Target Start/End: Complemental strand, 19078972 - 19078937
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtg 588  Q
    ||||||||||||| ||||||||||||||||||||||    
T  19078972 tttcacccaataagagagtgagtgttagagagagtg 19078937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 588
Target Start/End: Complemental strand, 19126860 - 19126825
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtg 588  Q
    ||||||||||||| ||||||||||||||||||||||    
T  19126860 tttcacccaataagagagtgagtgttagagagagtg 19126825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 603
Target Start/End: Complemental strand, 29068140 - 29068089
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    |||||||||||||||| ||||||||||||||| |||| |  |||||||||||    
T  29068140 atttcacccaataaaatagtgagtgttagagaaagtgttagaaagagagtgt 29068089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 613
Target Start/End: Complemental strand, 39974262 - 39974199
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||| | ||||||| ||||||||| ||||| ||| || |||||||||||||||| |||||||    
T  39974262 tgatttaaaccaataagagagtgagtattagaaagaatgttcaaaagagagtgttgttagcatt 39974199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 587
Target Start/End: Original strand, 50424980 - 50425019
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagt 587  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  50424980 attgattttatccaataaaagagtgagtgttagagagagt 50425019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 560 - 614
Target Start/End: Complemental strand, 931428 - 931374
Alignment:
Q  560 caataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||| ||||||| || | | ||||| |||||||||||||||||    
T  931428 caataaaagagtgagtattagagatagagttgaaaagtgagtgttgctagcattc 931374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 559 - 613
Target Start/End: Complemental strand, 6133678 - 6133624
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||| ||||||||| ||||||||  || ||||||||||||||||||| ||||    
T  6133678 ccaataagagagtgagtattagagaggatgttcaaaagagagtgttgctaacatt 6133624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 550 - 611
Target Start/End: Original strand, 15928673 - 15928732
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||| | ||||||||||||||||| ||  |||||||| |||||||||||||||| |||||    
T  15928673 tgatttaaaccaataaaagagtgagtatt--agagagtgttcaaaagagagtgttggtagca 15928732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 550 - 604
Target Start/End: Original strand, 25543457 - 25543511
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    |||||| | ||||||| | ||||||| |||||||||||| |||||||||||||||    
T  25543457 tgatttaaaccaataagatagtgagtattagagagagtgttcaaaagagagtgtt 25543511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 563 - 613
Target Start/End: Complemental strand, 29663625 - 29663575
Alignment:
Q  563 taaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||| ||||||||| |||| ||||||| ||||||| ||||||||    
T  29663625 taaaagagtgaatgttagagaaagtgttcaaaagtgagtgtttctagcatt 29663575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 428 - 501
Target Start/End: Original strand, 9165299 - 9165372
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtat 501  Q
    ||||||||||| | |||||||||||||  |||| | ||| | | ||| ||||||||||||| ||||||||||||    
T  9165299 gaggaatgctatccacactctcttttgaccactctatcttgcactcactcttttattgggtgaaatcaatgtat 9165372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 611
Target Start/End: Complemental strand, 12767390 - 12767329
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||| | ||||||||||||||||| |||||||| ||  |||||||||| | |||||||||    
T  12767390 tgatttaaaccaataaaagagtgagtattagagagggttttcaaaagagatttttgctagca 12767329  T

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Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 576
Target Start/End: Original strand, 13388452 - 13388481
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtg 576  Q
    ||||||||||||||||||||||||||||||    
T  13388452 cattgatttcacccaataaaagagtgagtg 13388481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 434 - 499
Target Start/End: Original strand, 50424866 - 50424931
Alignment:
Q  434 tgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgt 499  Q
    ||||| ||||||||||||||  ||||| ||||||  ||||| | ||||||||||| ||||||||||    
T  50424866 tgctagcaacactctcttttaggcactctctctaacattcacttttttattgggttaaatcaatgt 50424931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 2e-60; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 428 - 614
Target Start/End: Complemental strand, 19090398 - 19090212
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||||||||||||||||||| ||||| ||||||| |  || ||||||||||||| |||||||||||| |||| | ||||||| ||||||||||    
T  19090398 gaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 19090299  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||| | |||||| |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  19090298 ttccaaagtgtaggtcctacattgaattcaaccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 19090212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 434 - 618
Target Start/End: Complemental strand, 35128900 - 35128720
Alignment:
Q  434 tgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaa 533  Q
    ||||| |||||||||||||||  |||| ||||||| | ||| |||||||||||||||||||||||||| |||| | ||||||| |||||||||||| |||    
T  35128900 tgctagcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaa 35128801  T
Q  534 agtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttct 618  Q
    |||||||||| | ||||||||||||||||||||| | ||||||||||||||     |||||||||||||||| ||||||||||||    
T  35128800 agtgtaggtcctacattgatttcacccaataaaaaaatgagtgttagagagc----tcaaaagagagtgttgttagcattcttct 35128720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 428 - 608
Target Start/End: Original strand, 10060856 - 10061036
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| |||||||||||||||  |||| | | ||  | ||| |||||||||  || |||||||||||| |||| | ||||||| ||||||||||    
T  10060856 gaggaatgctagcaacactctcttttgaacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttccat 10060955  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgcta 608  Q
    || ||||||||||||| | ||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  10060956 tttcaaagtgtaggtcctacattgatctcacccaataaaaaagtgagtgttagagagagtgctcaaaagagagtgttgcta 10061036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 441 - 614
Target Start/End: Complemental strand, 19737605 - 19737432
Alignment:
Q  441 aacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtag 540  Q
    |||||| | ||||| ||||| ||||||| | ||| ||||| ||||||| ||||||||||||||||    ||||||| |||||| ||||||||||||||||    
T  19737605 aacactttattttgagcactctctctagcactcactctttaattgggtgaaatcaatgtatatcctatcactttatgtgggtttcatttccaaagtgtag 19737506  T
Q  541 gtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||| | ||||||||| | |||||||||||||||||| |||||||| || |||||||||||||||||||||||||    
T  19737505 gtcctacattgatttgagccaataaaagagtgagtgatagagagaatgttcaaaagagagtgttgctagcattc 19737432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 428 - 617
Target Start/End: Complemental strand, 6531481 - 6531296
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| ||||||||||||||| | ||| |||| || | ||| ||||||||||||| |||||||||||| |||| ||||||||| || |||||||    
T  6531481 gaggaatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgtatgtcccactactttatgtgagttccat 6531382  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttc 617  Q
    |||| ||||||||||| | |||| ||||||||     |||||||||||| |||||||| |  | |||||||||||||||||||| |||||    
T  6531381 ttccgaagtgtaggtcctacattaatttcacc----taaagagtgagtgctagagagaatacttaaaagagagtgttgctagcactcttc 6531296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 428 - 588
Target Start/End: Original strand, 373396 - 373556
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||||||||| ||| ||||| ||||| ||||||| |  || | |||||||||||||||||||||||| ||||   ||||||| ||| ||||||    
T  373396 gaggaatgctaacaacattcttttttgagcactctctctagcacccacttttttattgggtaaaatcaatgtatgtcccagcactttatgtggattccat 373495  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    || ||||| ||||||| | ||||||||| | ||||||||| ||| ||||||||||||||||    
T  373496 tttcaaagggtaggtcctacattgattttatccaataaaatagtaagtgttagagagagtg 373556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 457 - 613
Target Start/End: Original strand, 4595768 - 4595922
Alignment:
Q  457 cactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttc 556  Q
    |||| ||||||| | ||| |||||||||| || |||||||||||| || | | ||||| |||||||||||||| ||||||||| ||| | |||| |||||    
T  4595768 cactctctctagcactcactcttttattgagtgaaatcaatgtatgtctcaccactttttatgggttccattttcaaagtgtaagtcctacattaatttc 4595867  T
Q  557 acccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||| || ||||||||||||| |  | |||||  ||||||||||||||||||||||||    
T  4595868 accaaagaaaagagtgagtgct--aaagagttctcaaaagagagtgttgctagcatt 4595922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 431 - 611
Target Start/End: Original strand, 21987292 - 21987471
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttc 530  Q
    |||||||||||||| || ||||||  |||| ||| ||| | ||| | ||||||||| | ||||||||||||||||| | |||||||  | |||| |||||    
T  21987292 gaatgctaacaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttc 21987391  T
Q  531 caaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||||||| ||  ||| |||||| | ||||||| | ||||||| |||||||||||| ||||||||| ||| ||||||||    
T  21987392 caaagtgtagatc-cgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagggtggtgctagca 21987471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 547 - 619
Target Start/End: Original strand, 19090328 - 19090400
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||| ||||    
T  19090328 cattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctctt 19090400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 6531411 - 6531478
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||    
T  6531411 cattgatttcacccaataaaagagtgagtgctggagagagtcctcaaaagagagtgttgctagcattc 6531478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 476 - 612
Target Start/End: Original strand, 34905381 - 34905516
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    ||||||||||| | |||||||||||| |||| | ||||| | ||||||| |||| ||||||||||  |   || |||||| | ||||||| |||||||||    
T  34905381 tcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagaccca-caatgatttaaaccaataagagagtgagt 34905479  T
Q  576 gttagagagagtgatcaaaagagagtgttgctagcat 612  Q
     |||||||| ||| |||||||||||||||||||||||    
T  34905480 attagagagggtgttcaaaagagagtgttgctagcat 34905516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 547 - 611
Target Start/End: Original strand, 35128836 - 35128900
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  35128836 cattgattttacccaataaaagagtgactgctagagagagtgttcaaaagagagtgttgctagca 35128900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 34905403 - 34905337
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||| |||||||||||||||||||||||||||||| | ||||  ||||||||||||||||    
T  34905403 cattgatttcatccaataaaagagtgagtgttagagagagtgttgaaaaatgagtgttgctagcatt 34905337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 10060926 - 10060853
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||||||||||||  ||||||||||||| ||||| | |||||| ||||||||||||||||||||||||| |||||    
T  10060926 cattgatttcacataataaaagagtgattgttataaagagtgttcaaaagagagtgttgctagcattcctcttt 10060853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 440 - 616
Target Start/End: Complemental strand, 12794985 - 12794809
Alignment:
Q  440 caacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgta 539  Q
    |||||||||||||||  |||| ||||||  ||| | |  ||||||  || |||| |||||||||||| | ||||||| || ||| ||||| |||| ||||    
T  12794985 caacactctcttttgaacactctctctaacatttatttatttatttagtgaaattaatgtatatcccaccactttatgtgagtttcattttcaaaatgta 12794886  T
Q  540 ggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattctt 616  Q
    |||| | |||| |||||| ||||||||||| ||||| ||||||  | |  ||||||||||||||| ||| |||||||    
T  12794885 ggtcctacattaatttcatccaataaaagaatgagtattagagtaaatattcaaaagagagtgttactaacattctt 12794809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 500
Target Start/End: Original strand, 19090204 - 19090281
Alignment:
Q  423 aatatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||| | ||| ||||||||||| | || ||||||||    
T  19090204 aatatgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgta 19090281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 478 - 613
Target Start/End: Original strand, 1392675 - 1392808
Alignment:
Q  478 ttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgt 577  Q
    ||||||||| | |||||||||||| || | ||||||| |||| |||| ||||  ||| |||||  ||  || |||||| | ||||||| ||||||||| |    
T  1392675 ttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtagccca--caatgatttaaaccaataagagagtgagtat 1392772  T
Q  578 tagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||| || ||| ||||||||||||||||||||||||    
T  1392773 tagatagggtgttcaaaagagagtgttgctagcatt 1392808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 552 - 619
Target Start/End: Original strand, 10133276 - 10133343
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||| |||||||| ||||||||||||||||||||| | ||||| ||||||| ||| ||||||||||    
T  10133276 atttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgtttctaccattcttctt 10133343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 606
Target Start/End: Original strand, 31116237 - 31116296
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgc 606  Q
    ||||||||||| |||||| |||||||| |||||||||||||| ||||||| |||||||||    
T  31116237 cattgatttcatccaatagaagagtgaatgttagagagagtgttcaaaagtgagtgttgc 31116296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 527 - 585
Target Start/End: Complemental strand, 9940445 - 9940387
Alignment:
Q  527 tttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagaga 585  Q
    |||||||||||||  || | |||||||||||||||||||||||||||||| ||||||||    
T  9940445 tttccaaagtgtaaatcctacattgatttcacccaataaaagagtgagtgctagagaga 9940387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 550 - 619
Target Start/End: Original strand, 8441953 - 8442022
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||||| |||||||| ||||||||||||||||||||| | ||||  ||||| ||||||||||| ||||    
T  8441953 tgatttcatccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcattcctctt 8442022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 550 - 619
Target Start/End: Original strand, 8450757 - 8450826
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||||| |||||||| ||||||||||||||||||||| | ||||  ||||| ||||||||||| ||||    
T  8450757 tgatttcatccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcattcctctt 8450826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 19737548 - 19737605
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||| | ||||||    
T  19737548 cattgatttcacccaattaaagagtgagtgctagagagagtgctcaaaataaagtgtt 19737605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 604
Target Start/End: Complemental strand, 32439538 - 32439486
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    |||||||||||||| |||||||||||||||||||||| |  ||||||||||||    
T  32439538 atttcacccaataagagagtgagtgttagagagagtgtttgaaagagagtgtt 32439486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 373466 - 373399
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||| ||||||||||| |||| ||| ||||||||||| |||||| ||| ||||| ||||||||    
T  373466 cattgattttacccaataaaaaagtgggtgctagagagagtgctcaaaaaagaatgttgttagcattc 373399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 543 - 614
Target Start/End: Complemental strand, 12690323 - 12690252
Alignment:
Q  543 catgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||| |||||| ||||||||||||  |||||||||||||||| | |||| |||||||  |||||||||    
T  12690323 catgcattaatttcatccaataaaagagcaagtgttagagagagtgtttaaaatagagtgtccctagcattc 12690252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 576
Target Start/End: Complemental strand, 6992372 - 6992306
Alignment:
Q  510 actttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtg 576  Q
    ||||||| || ||| ||||||||||||||||||| | ||||||||| || |||||||||| ||||||    
T  6992372 actttatgtgagtttcatttccaaagtgtaggtcctacattgattttactcaataaaagaatgagtg 6992306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 624
Target Start/End: Original strand, 17226645 - 17226719
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctttaaat 624  Q
    |||||||| ||||||||||||||| || || |||||||| ||| |||||||||||| ||| |||| || ||||||    
T  17226645 tgatttcatccaataaaagagtgaatgctaaagagagtgttcagaagagagtgttgttagtattcctcgttaaat 17226719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 588
Target Start/End: Complemental strand, 4595809 - 4595768
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    |||||||||||| ||||||||||||||||| |||||||||||    
T  4595809 cattgatttcactcaataaaagagtgagtgctagagagagtg 4595768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 614
Target Start/End: Complemental strand, 12753811 - 12753758
Alignment:
Q  561 aataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||| |||| |||||||||||| | |||||||||||||||||| ||||    
T  12753811 aataaaagagcgagtattagagagagtgttgaaaagagagtgttgctagtattc 12753758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 426 - 588
Target Start/End: Original strand, 445813 - 445974
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    ||||||||||||| ||| ||||  ||||   |||||||||||| | ||| | ||||||||| | |||||||||||| || | | ||||| | |||||||     
T  445813 atgaggaatgctagcaatactcatttttcaacactatctctagcactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttca 445912  T
Q  526 atttccaaagtgtag-gtcatgcattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    |||| |||||| ||| ||||  || |||||| | ||||||| ||| ||||| ||||||||||||    
T  445913 attttcaaagtctagagtca--caatgatttaaaccaataagagaatgagtattagagagagtg 445974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 440 - 588
Target Start/End: Complemental strand, 31116295 - 31116148
Alignment:
Q  440 caacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgta 539  Q
    |||||||| ||||||  |||| ||||||  ||||| |||| |||||| | |||||||||||| |||| ||||||| | || |||| |||||||| |||||    
T  31116295 caacactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 31116196  T
Q  540 ggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
       |   || |||||| | ||||||| ||||||||| ||||||||||||    
T  31116195 -aacccacaatgatttaaaccaataagagagtgagtattagagagagtg 31116148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 445885 - 445818
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||| |||||||| |||||| |||| | ||||  |||| ||||||||||||    
T  445885 cattgatttcatccaataaaaaagtgagtgctagagatagtgttgaaaaatgagtattgctagcattc 445818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 21987359 - 21987292
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||| |||||||| || ||||||||  |||||| || ||||| ||||||||    
T  21987359 cattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgttagcattc 21987292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 27096360 - 27096418
Alignment:
Q  132 attggtggagaaacccactacaatgtcgtggtaaaatgcatcatattcatgtgtgattt 190  Q
    ||||||||| |||||||| |||||||| |  ||||||||||| || |||||||||||||    
T  27096360 attggtggacaaacccacaacaatgtcttcttaaaatgcatcttagtcatgtgtgattt 27096418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 5106365 - 5106308
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    ||||||||| | ||||||||| ||||||||||||||| |||| | ||||| |||||||    
T  5106365 cattgattttatccaataaaaaagtgagtgttagagaaagtgttgaaaagtgagtgtt 5106308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 8441902 - 8441857
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    ||||||||||||||||| |||||||||||| |||||| | ||||||    
T  8441902 ccaataaaagagtgagtattagagagagtgttcaaaaaatagtgtt 8441857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 8450706 - 8450661
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    ||||||||||||||||| |||||||||||| |||||| | ||||||    
T  8450706 ccaataaaagagtgagtattagagagagtgttcaaaaaatagtgtt 8450661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 608
Target Start/End: Original strand, 12794955 - 12794988
Alignment:
Q  575 tgttagagagagtgatcaaaagagagtgttgcta 608  Q
    |||||||||||||| |||||||||||||||||||    
T  12794955 tgttagagagagtgttcaaaagagagtgttgcta 12794988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 29423395 - 29423350
Alignment:
Q  566 aagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||||||||||||||||| ||||| | || |||||||||||    
T  29423395 aagagtgagtgttagagagagtgttcaaaggtgaatgttgctagca 29423350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 548 - 613
Target Start/End: Complemental strand, 32122861 - 32122796
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||| ||||||||  |||||||| | || |||||| | |||||||||||||| |||||||    
T  32122861 attgatttcatccaataaataagtgagtggtggaaagagtgttgaaaagagagtgttgttagcatt 32122796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 3e-59; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 427 - 619
Target Start/End: Complemental strand, 42224775 - 42224583
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcca 526  Q
    |||||||||||| ||||||||||||||| ||||| ||||||| | ||| ||||||||| ||| |||||||||||| |||| | ||||||| |||||||||    
T  42224775 tgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttcca 42224676  T
Q  527 tttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||| ||||    
T  42224675 tttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctggagagagttctcaaaagagagtgttgctagcattcctctt 42224583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 426 - 611
Target Start/End: Complemental strand, 40971638 - 40971453
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| | ||| |||||||||| || |||||||||||| |||| | ||||||| |  ||| |    
T  40971638 atgaggaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtaagtttc 40971539  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||||||||||||||| | ||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  40971538 atttccaaagtgtaggtcttacattgattttacccaataaaatagtgagtgttagatagagtgttcaaaagagagtgttgctagca 40971453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 428 - 611
Target Start/End: Original strand, 4959275 - 4959458
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| ||||||||||||||| ||||| |||||| ||  || ||||||||||||| |||||||||||| || |   | ||||| |||||| |||    
T  4959275 gaggaatgctagcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaatgtatgtctcatcattttatgtgggttacat 4959374  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    || |||||||||||| || |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  4959375 tttcaaagtgtaggtgatacattgatttcccccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttactagca 4959458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 434 - 614
Target Start/End: Original strand, 26072106 - 26072286
Alignment:
Q  434 tgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaa 533  Q
    ||||||||||||||||||||| ||||| | |||| || ||| |||||| |||||| |||||||||||| || | | ||||||| |||  | |||||||||    
T  26072106 tgctaacaacactctcttttgagcactctttctaatactcattctttttttgggtgaaatcaatgtatgtctcaccactttatgtggaattcatttccaa 26072205  T
Q  534 agtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||   ||||| |||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||    
T  26072206 agtgtaggtcccacattgttttcacccaataaaagagtgagtgctagagagaatgctcaaaagagagtgttgctagcattc 26072286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 422 - 614
Target Start/End: Complemental strand, 17568891 - 17568699
Alignment:
Q  422 aaatatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatggg 521  Q
    ||||||||| | ||||||||||||  ||||||| | ||| || |||| | ||| |||||||||| || |||||||| ||| |||| | ||||||  | ||    
T  17568891 aaatatgagaagtgctaacaacacaatcttttgagtactctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccactttaggtagg 17568792  T
Q  522 ttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||| |||||||||||||||||| | |||| |||||| |||||||||||||| ||| ||| ||||||| |||||||||||||||||||||||||    
T  17568791 ttctatttccaaagtgtaggtcctacattaatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcattc 17568699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 441 - 611
Target Start/End: Original strand, 6263893 - 6264061
Alignment:
Q  441 aacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtag 540  Q
    |||||||||||||| ||||| ||||||  | ||| || ||||||||||||||||||| ||| |||| | |||||||  |||||||| ||||||||||| |    
T  6263893 aacactctcttttgagcactctctctatcactcactcctttattgggtaaaatcaatatatgtcccaccactttat--gggttccagttccaaagtgttg 6263990  T
Q  541 gtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
     || | ||||||||||||||| |||||||||||||| |||| |||||| | ||||||||||||||||||||    
T  6263991 atcttacattgatttcacccactaaaagagtgagtgctagatagagtgcttaaaagagagtgttgctagca 6264061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 619
Target Start/End: Original strand, 32050333 - 32050495
Alignment:
Q  457 cactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttc 556  Q
    |||| ||||||| ||||| ||||||||||||| |||| ||| ||| || |   ||||||| |||||||||||| |||||||| |  ||| ||||||||||    
T  32050333 cactctctctagcattcattcttttattgggtgaaattaatatatgtctcatcactttatgtgggttccattttcaaagtgtggaacatacattgatttc 32050432  T
Q  557 acccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    ||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||| ||||    
T  32050433 acccaataaaaaagtgagtgctagagagaatgctcaaaagagagtgttgctagcattcatctt 32050495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 432 - 614
Target Start/End: Original strand, 8912511 - 8912695
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttcc 531  Q
    ||||||| |||| |||||||||   |||| | ||||| | ||| ||||||||| |||||||| ||| ||| |||||| ||||| | |||||| |||||||    
T  8912511 aatgctagcaacgctctcttttaaacactttttctagcactcactcttttatttggtaaaattaatatatgtccctccactttctgtgggtttcatttcc 8912610  T
Q  532 aaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagaga--gtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||| |||||  |||||||||||| |||||||||||||||| ||||||||  ||| |||||||||| |||||||| |||||    
T  8912611 aaagtgtatgtcatatattgatttcacctaataaaagagtgagtgatagagagagtgtgctcaaaagagactgttgctaacattc 8912695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 24915100 - 24915242
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    ||||||||| ||| |||||||| ||| |||| | ||||||| |||||||||||| ||||||||| ||| | |||||||||||||||||||||||||||||    
T  24915100 tcttttattaggtgaaatcaatatatgtcccaccactttatgtgggttccattttcaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 24915199  T
Q  576 gttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    | |  |||||||| | |||||||||||||||||| |||| |||||    
T  24915200 gct--agagagtgcttaaaagagagtgttgctagtattcctcttt 24915242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 24990931 - 24991073
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    ||||||||||||| |||||||| ||| |||| | ||||||| | |||||||||| ||||||||| ||| | |||||||||||||||||||||||||||||    
T  24990931 tcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 24991030  T
Q  576 gttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    | |  |||||||| | |||||||||||||||||| |||| |||||    
T  24991031 gct--agagagtgcttaaaagagagtgttgctagtattcctcttt 24991073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 426 - 608
Target Start/End: Complemental strand, 13456348 - 13456170
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    ||||||||||||| || |||| ||||||| |||||  ||||| || ||| |||||||| || | |||||||||||| |||| | | ||||| ||||||||    
T  13456348 atgaggaatgctagcagcactttcttttgagcact--ctctattactcactcttttatcggatgaaatcaatgtatttcccaccattttatgtgggttcc 13456251  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgcta 608  Q
    |||| ||||||||||| | | ||||||||||||| |||||||||||||||| |  |||||||  |||||||||||||||||||    
T  13456250 attttcaaagtgtaggacctacattgatttcacctaataaaagagtgagtgct--agagagtactcaaaagagagtgttgcta 13456170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 476 - 613
Target Start/End: Original strand, 34818231 - 34818368
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    |||||||||  ||||||||||||||| |  | |  |||||| ||||||||||||| ||||| |||||| | ||||||||| ||| ||||||| |||||||    
T  34818231 tcttttattaagtaaaatcaatgtatgtgtcaccgctttatgtgggttccatttctaaagtataggtcctacattgattttaccaaataaaaaagtgagt 34818330  T
Q  576 gttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||||| |||||||||| |||| ||||||||    
T  34818331 gttagagagagtgctcaaaagagaatgttcctagcatt 34818368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 428 - 613
Target Start/End: Complemental strand, 28611961 - 28611777
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    |||||||||||||||||||| |||||| ||||| ||||||  ||||| ||||| ||||| || || || ||||| ||||   ||||| |||| |||||||    
T  28611961 gaggaatgctaacaacactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgtatgagttccat 28611862  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||  |||||||||  |   || |||||| |  ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  28611861 ttttaaagtgtaga-cgcacaatgatttaaatcaataaaagagttggtgttagagagagtgctcaaaagagagtgttgctagcatt 28611777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 547 - 619
Target Start/End: Complemental strand, 4959345 - 4959273
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||| ||||    
T  4959345 cattgatttcacccaataaaagagtgggtattagagagagtgctcaaaagagagtgttgctagcattcctctt 4959273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 42224704 - 42224771
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  42224704 cattgatttcacctaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 42224771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 40971566 - 40971633
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  40971566 cattgatttcactcaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgttagcattc 40971633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 548 - 614
Target Start/End: Complemental strand, 6263949 - 6263883
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||| ||| |||||    
T  6263949 attgattttacccaataaaggagtgagtgatagagagagtgctcaaaagagagtgttactaacattc 6263883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 422 - 499
Target Start/End: Complemental strand, 26072295 - 26072218
Alignment:
Q  422 aaatatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgt 499  Q
    ||||||||||||||||| ||||||||||||||| ||| | ||||||| | ||| ||||||||||||| ||| ||||||    
T  26072295 aaatatgaggaatgctagcaacactctcttttgagcattctctctagcactcactcttttattgggtgaaaacaatgt 26072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 26072170 - 26072106
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||||||||||||| |||||| ||||| ||||| |||||| |||||||||||||||| |||||    
T  26072170 cattgatttcacccaaaaaaagaatgagtattagaaagagtgctcaaaagagagtgttgttagca 26072106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 431 - 603
Target Start/End: Complemental strand, 30326054 - 30325883
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttc 530  Q
    |||||||| ||||| || ||||||  |||| ||| ||| | ||| | ||||||||| | |||||||||||| || | | |||||||  | |||| || ||    
T  30326054 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctc 30325955  T
Q  531 caaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    |||||||||| ||  ||| |||||| | ||||||| | ||||||| |||||||||||| ||||||||||||||    
T  30325954 caaagtgtagatcc-gcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgt 30325883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 428 - 619
Target Start/End: Original strand, 34368357 - 34368547
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| |||||||   |||||  |||| ||||||  | ||| ||||| ||||| ||||| |||||||| | || | ||||| | |||||||  |    
T  34368357 gaggaatgctagcaacacttatttttgaacactttctctaacactcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatt 34368456  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    || ||||||||||  |   || |||||| | ||||||| |||||| |||  |||||||||| ||||||||||||||||||||||||| ||||    
T  34368457 tttcaaagtgtagaccca-caatgatttaaaccaataagagagtgggtgacagagagagtgctcaaaagagagtgttgctagcattcctctt 34368547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 613
Target Start/End: Original strand, 31542356 - 31542422
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||| |||||||||||||||  | |||||||||||||||||| |||||||| ||| |||||||||||    
T  31542356 cattaatttcacccaataaataaatgagtgttagagagagtgctcaaaagatagttttgctagcatt 31542422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 423 - 500
Target Start/End: Original strand, 42224580 - 42224657
Alignment:
Q  423 aatatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    |||| ||||||||||| ||||||||||||||| | ||| |||| || | ||| ||||||||||||| |||||||||||    
T  42224580 aataagaggaatgctagcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatgta 42224657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 588
Target Start/End: Complemental strand, 10142111 - 10142000
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    ||||||||||| |||||||||||||| |||| | ||||| | | |||||||||| ||||||||||  ||  || | |||| |  |||||| |||||||||    
T  10142111 tcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccattttcaaagtgtagacca-acaattatttaaatcaataagagagtgagt 10142013  T
Q  576 gttagagagagtg 588  Q
    |||||||||||||    
T  10142012 gttagagagagtg 10142000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 559 - 607
Target Start/End: Complemental strand, 28490775 - 28490727
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgct 607  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  28490775 ccaataagagagtgagtattagagagagtgttcaaaagagagtgttgct 28490727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 613
Target Start/End: Original strand, 30892229 - 30892289
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||||  |||||||||||||||||||||| |  |||||||||||| ||||||||    
T  30892229 tttcacccaataggagagtgagtgttagagagagtgctagaaagagagtgttcctagcatt 30892289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 559 - 614
Target Start/End: Original strand, 28611903 - 28611958
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||| ||||||||| |||||||||||||| ||||||| |||||||| ||||||||    
T  28611903 ccaatgaaagagtgaatgttagagagagtgctcaaaagtgagtgttgttagcattc 28611958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 30325987 - 30326054
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||| |||||||| || ||||||||  |||||| || ||||||||||||||    
T  30325987 cattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 30326054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 550 - 613
Target Start/End: Complemental strand, 41105632 - 41105569
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||| | ||||||| |||| |||| |||||||||||| |||||||||||||||||| |||||    
T  41105632 tgatttaaaccaataagagagcgagtattagagagagtgctcaaaagagagtgttgctcgcatt 41105569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 427 - 501
Target Start/End: Complemental strand, 4959465 - 4959391
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtat 501  Q
    |||||| |||||  |||||||||||||| ||||| ||||||| | ||| ||||||||||||  ||||||||||||    
T  4959465 tgaggagtgctagtaacactctcttttgagcactctctctagcactcactcttttattgggggaaatcaatgtat 4959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 422 - 500
Target Start/End: Complemental strand, 6264073 - 6263995
Alignment:
Q  422 aaatatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||| ||||| ||||||||||||||  ||||| | ||||| | ||| ||||||| ||||| |||||||||||    
T  6264073 aaatatgaggagtgctagcaacactctcttttaagcactctatctagcactcactcttttagtgggtgaaatcaatgta 6263995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 441 - 611
Target Start/End: Complemental strand, 27592622 - 27592453
Alignment:
Q  441 aacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtag 540  Q
    ||||||| ||||||  |||| ||| ||| | ||| | ||||||||| | |||||||||||| || | | |||||||  | |||| |||||||||||||||    
T  27592622 aacactcgcttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtag 27592523  T
Q  541 gtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
     || |||| |||||| | ||||||| |||||| ||    ||||||||  |||||||||||||||| |||||    
T  27592522 atc-tgcaatgatttaaaccaataagagagtgggtacaggagagagtattcaaaagagagtgttgatagca 27592453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 620
Target Start/End: Complemental strand, 28223838 - 28223768
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    |||||| | ||||||||||||||||| ||||||||  || ||||||||| |||||| ||| ||||||||||    
T  28223838 tgatttaaaccaataaaagagtgagtattagagaggatgttcaaaagagggtgttgttagtattcttcttt 28223768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 431 - 501
Target Start/End: Complemental strand, 32050490 - 32050420
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtat 501  Q
    |||||||| ||||||||||||||| ||| | ||||||| | ||| | ||||||||||| ||||||||||||    
T  32050490 gaatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtat 32050420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 1649617 - 1649544
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    |||| |||||| ||||||| | |||||||||||||||||||| | ||||||||||||  ||| ||||| |||||    
T  1649617 cattaatttcatccaataagatagtgagtgttagagagagtgttgaaaagagagtgtccctaacattcctcttt 1649544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 614
Target Start/End: Complemental strand, 2443739 - 2443686
Alignment:
Q  561 aataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||| ||||  |||| |||||| |||||||||||||||||||||||||    
T  2443739 aataaaagagcgagttctagacagagtgctcaaaagagagtgttgctagcattc 2443686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 577
Target Start/End: Complemental strand, 27726885 - 27726832
Alignment:
Q  524 ccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgt 577  Q
    |||||||||||||||||| |   |||| ||||||||||||||||||||||||||    
T  27726885 ccatttccaaagtgtaggacccacattaatttcacccaataaaagagtgagtgt 27726832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 12076127 - 12076063
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||| | ||||| | ||||||||| ||||| | |||| ||||||||||||||||||||||    
T  12076127 cattgatttaagccaattagagagtgagtattagataaagtgttcaaaagagagtgttgctagca 12076063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 603
Target Start/End: Original strand, 5990638 - 5990689
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    ||||||||||||||||||||||||||| |||| |||| |  |||||||||||    
T  5990638 atttcacccaataaaagagtgagtgttggagaaagtgttagaaagagagtgt 5990689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 611
Target Start/End: Original strand, 17568816 - 17568879
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||||| ||||||||||||||||| ||| ||||||  ||||||||  |||||| |||||    
T  17568816 attgatttcactcaataaaagagtgagtgctagggagagtactcaaaagattgtgttgttagca 17568879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 588
Target Start/End: Original strand, 25710575 - 25710626
Alignment:
Q  537 gtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    ||||| ||| |||||||||||| ||||||||||||||||| || ||||||||    
T  25710575 gtaggacatacattgatttcacacaataaaagagtgagtgataaagagagtg 25710626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 27592565 - 27592632
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||| |||||||| || ||||||||  |||||| ||||||| |||| ||||    
T  27592565 cattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagcgagtgttactagaattc 27592632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 614
Target Start/End: Complemental strand, 34368415 - 34368360
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||| ||||||||||||||||||| |||| ||||||   ||||||||||||||||    
T  34368415 ccaatgaaagagtgagtgttagagaaagtgttcaaaaataagtgttgctagcattc 34368360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 552 - 586
Target Start/End: Original strand, 18237255 - 18237289
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagag 586  Q
    |||||||||||||||||||||||||||||| ||||    
T  18237255 atttcacccaataaaagagtgagtgttagaaagag 18237289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 619
Target Start/End: Original strand, 28490837 - 28490907
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    ||||||||| ||||||||| ||||| || ||||||||||  | ||||| || |||||||||||||| ||||    
T  28490837 ttgatttcatccaataaaaaagtgaatgctagagagagttttgaaaagtgactgttgctagcattcctctt 28490907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 566 - 608
Target Start/End: Original strand, 29155522 - 29155564
Alignment:
Q  566 aagagtgagtgttagagagagtgatcaaaagagagtgttgcta 608  Q
    |||||||||||| |||||||||  |||||||||||||||||||    
T  29155522 aagagtgagtgtcagagagagttctcaaaagagagtgttgcta 29155564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 565 - 611
Target Start/End: Original strand, 32401251 - 32401297
Alignment:
Q  565 aaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||||| |||||||||||| ||||||||  ||||||||||||    
T  32401251 aaagagtgagtattagagagagtgttcaaaagaaggtgttgctagca 32401297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 571 - 613
Target Start/End: Original strand, 40926184 - 40926226
Alignment:
Q  571 tgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||||| |||||||| ||||||| |||||||    
T  40926184 tgagtgttagagagagtgctcaaaagaaagtgttgttagcatt 40926226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 611
Target Start/End: Complemental strand, 2201650 - 2201589
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||| ||||||||| |||||| ||| || |||||||| | ||||||||||||| ||||||    
T  2201650 tgattttacccaataagagagtgggtgctaaagagagtgttgaaaagagagtgttcctagca 2201589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 613
Target Start/End: Complemental strand, 8912572 - 8912511
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||| ||| |||||||||||||||| |||| | |||| | ||||||||| ||||||||||||    
T  8912572 attttaccaaataaaagagtgagtgctagaaaaagtgtttaaaagagagcgttgctagcatt 8912511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 588
Target Start/End: Original strand, 16875378 - 16875419
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||    
T  16875378 cattgattttacccaataagagagtgagtgttagagaaagtg 16875419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 24915239 - 24915169
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||| ||| ||||||||||||||  |||||  |||||| | ||| ||||||||||||| |||||||||||    
T  24915239 gaggaatactagcaacactctcttttaagcact--ctctagcactcactcttttattgggtgaaatcaatgta 24915169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 24991070 - 24991000
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||| ||| ||||||||||||||  |||||  |||||| | ||| ||||||||||||| |||||||||||    
T  24991070 gaggaatactagcaacactctcttttaagcact--ctctagcactcactcttttattgggtgaaatcaatgta 24991000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 619
Target Start/End: Complemental strand, 36494291 - 36494218
Alignment:
Q  547 cattgatttcacccaat-aaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||| |||||| ||||| |||||||| ||||||||||||| || | |||||||| |||  ||||||||||||||    
T  36494291 cattaatttcatccaattaaaagagtaagtgttagagagaatgtttaaaagagaatgtctctagcattcttctt 36494218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 8e-54; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 427 - 614
Target Start/End: Original strand, 13919776 - 13919963
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcca 526  Q
    |||| ||||||| ||||||||||||||| ||||| ||||||| | ||  || |||||||||| |||||||||||| |||| | ||||||| |||||||||    
T  13919776 tgagaaatgctagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcca 13919875  T
Q  527 tttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||| ||||||||||||| | |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  13919876 ttttcaaagtgtaggtcctacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 13919963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 429 - 611
Target Start/End: Original strand, 45909453 - 45909636
Alignment:
Q  429 aggaatgctaacaacactctcttttgtgcactatctctagtattcagtctttt-attgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    |||||||||| ||||||| ||||||| ||||| || |||| ||||| |||||| ||||||| |||||||||||| |||| | ||||||| ||||||||||    
T  45909453 aggaatgctatcaacactatcttttgagcactctccctagcattcactctttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 45909552  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||| |||||||| | ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  45909553 ttccaaattgtaggtcctacattgattttacccaataaaagagtgagtgttagagagagtattcaaaagagagtgttgctagca 45909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 428 - 614
Target Start/End: Complemental strand, 26703621 - 26703437
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| |||||||||  |||| ||| | ||||||| | ||| ||||||||||||| |||||||||||| || | | ||||||| ||||||||||    
T  26703621 gaggaatgctagcaacactct--tttgagcattctctctagcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatgtgggttccat 26703524  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||| |||||||||||| | |||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||    
T  26703523 ttctaaagtgtaggtcctacatttatttcacccaataaaagagtgagtgctagagagagtgctcagaagagagtgttgctagcattc 26703437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 426 - 613
Target Start/End: Complemental strand, 25428664 - 25428477
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    |||| |||||||| ||||||||||||||| ||||| | | ||||| ||| |||||||||| || |||||||||||| |||| | ||||||| |||||| |    
T  25428664 atgatgaatgctagcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttac 25428565  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||||||| || | ||||||||| | |||||||||||||||||| || |||||||| ||||||||||||||||||| ||||    
T  25428564 atttccaaagtgtagatcctacattgattttatccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgctatcatt 25428477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 470 - 614
Target Start/End: Complemental strand, 19841026 - 19840882
Alignment:
Q  470 attcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaaga 569  Q
    ||||| ||||||||||| | |||||||||||| ||   | ||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  19841026 attcactcttttattggttgaaatcaatgtatgtcttaccactttatgtgggttccatttccaaagtgtaggtcctatattgatttcacccaataaaaga 19840927  T
Q  570 gtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||    
T  19840926 gtgagtgctagagagagtgctcaaaatagagtgttgctagcattc 19840882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 429 - 579
Target Start/End: Complemental strand, 19494521 - 19494371
Alignment:
Q  429 aggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatt 528  Q
    |||||||||| || |||||||||||| | ||| ||||||||| ||| ||||||||||||| |||||||||||| |||| | ||||||| |||||||||||    
T  19494521 aggaatgctagcagcactctcttttgagtactttctctagtactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 19494422  T
Q  529 tccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgtta 579  Q
    | |||||||||| || | |||||||||||||||||||||  ||||||||||    
T  19494421 ttcaaagtgtagatcctacattgatttcacccaataaaaatgtgagtgtta 19494371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 422 - 614
Target Start/End: Original strand, 14759634 - 14759826
Alignment:
Q  422 aaatatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatggg 521  Q
    ||||||||| | ||||||||||||  ||||||| | ||| || |||| | ||| |||||||||| || |||||||| ||| |||| | ||||||  | ||    
T  14759634 aaatatgagaagtgctaacaacacaatcttttgagtactctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccactttaggtagg 14759733  T
Q  522 ttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||| |||||||||||||||||| | |||| |||||| |||||||||||||| ||| ||| ||||||| |||||||||||||||||||||||||    
T  14759734 ttctatttccaaagtgtaggtcctacattaatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcattc 14759826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 432 - 611
Target Start/End: Complemental strand, 24539302 - 24539123
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttcc 531  Q
    ||||||| | |||||||||||||  |||| ||||||  | ||| ||||||||||| |||||||||| ||| |||| | ||||||||||| ||||||||||    
T  24539302 aatgctagcgacactctcttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttcc 24539203  T
Q  532 aaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||| |||| | |   ||||||||| ||||||| | ||||||||||||||||||||||  |||||||||||||||||||||    
T  24539202 aaaatgtatgacccacattgatttaacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgctagca 24539123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 423 - 573
Target Start/End: Original strand, 22786143 - 22786293
Alignment:
Q  423 aatatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggt 522  Q
    ||||| |||||||||| ||||||||||||||| ||||| ||||||| | ||| | ||||||| ||| |||||||||||| || | | ||||||| |||||    
T  22786143 aatataaggaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccactttatgtgggt 22786242  T
Q  523 tccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtga 573  Q
    |||||||||||||||||||| || |||||||||||||  ||||||||||||    
T  22786243 tccatttccaaagtgtaggttatacattgatttcacctgataaaagagtga 22786293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 428 - 576
Target Start/End: Complemental strand, 17354710 - 17354562
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| ||||||||| ||||| ||||| ||||||  | ||| ||||||||||| | |||||||||||| |||| | ||||||| ||||||| ||    
T  17354710 gaggaatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctat 17354611  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtg 576  Q
    |||||||||||||||| | ||||||||| ||||||||||| ||||||||    
T  17354610 ttccaaagtgtaggtcctacattgattttacccaataaaaaagtgagtg 17354562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 432 - 611
Target Start/End: Original strand, 17749695 - 17749874
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttcc 531  Q
    ||||||| | ||||||| |||||  |||| ||||||  | ||| ||||||||||| |||||||||| ||| |||| | ||||||||||| || |||||||    
T  17749695 aatgctagcgacactcttttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttcc 17749794  T
Q  532 aaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||| |||| | |   ||||||||| ||||||| | ||||||||||||||||||||||  |||||||||||||||||||||    
T  17749795 aaaatgtatgacccacattgatttaacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgctagca 17749874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 428 - 623
Target Start/End: Original strand, 27888279 - 27888473
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| |||||||| |||||| ||||| ||||||  | |||  || | ||||| |||||||||||||| |||| | ||||| | ||||||| ||    
T  27888279 gaggaatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaat 27888378  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctttaaa 623  Q
    ||  |||||||||  |   || |||||| | ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  27888379 ttttaaagtgtagaccca-caatgatttaaaccaataagagagtgagtgttagagagagtgctcaaaagagagtgttgctagcattcctctataaa 27888473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 488 - 605
Target Start/End: Original strand, 26189960 - 26190077
Alignment:
Q  488 taaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagt 587  Q
    ||||||||||| || |||| | || | || |||||| ||||| ||||||||||||| | | ||||||| ||||||||||||||||||||||||||| |||    
T  26189960 taaaatcaatgcatgtcccaccacctcatgtgggtttcattttcaaagtgtaggtcctacgttgattttacccaataaaagagtgagtgttagagaaagt 26190059  T
Q  588 gatcaaaagagagtgttg 605  Q
    | ||||||||||||||||    
T  26190060 gttcaaaagagagtgttg 26190077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 10477729 - 10477797
Alignment:
Q  220 tttcaaccaaataattttaccatttgaatattgttgaaatattaacattctttttgaagcgcataaaaa 288  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  10477729 tttcaaccaagtaattttaccatttgaatattgttgaaatattaacattctttttggagcgcagaaaaa 10477797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 530 - 621
Target Start/End: Complemental strand, 37549708 - 37549617
Alignment:
Q  530 ccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttta 621  Q
    |||||||||||||| | |||||| |||| ||||||||||||| |||| |||||| |||| ||||||||||||||||||||||||| ||||||    
T  37549708 ccaaagtgtaggtcctacattgaattcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcattcctcttta 37549617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 17354640 - 17354707
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||    
T  17354640 cattgatttcatccaataaaagaatgagtgttagagagagtgctcaaaaaagagtgttgctagcattc 17354707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 426 - 613
Target Start/End: Original strand, 22189934 - 22190120
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    |||||||||||||  |||||||  ||||   |||| ||||||| | ||| ||||||||||| | ||||||||||||  ||| | ||||| | |||||||     
T  22189934 atgaggaatgctagaaacactcatttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttca 22190033  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||| ||||||||||  |  ||| |||||| | |||||||| |||||||| |||||||| ||| |||||||||||||||| |||||||    
T  22190034 attttcaaagtgtagaccc-gcaatgatttaaaccaataaacgagtgagtattagagagggtgttcaaaagagagtgttgttagcatt 22190120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 22786218 - 22786151
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||| ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  22786218 cattgatttcacctaataaaaaagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 22786151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 13919847 - 13919781
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  13919847 cattgatttcacccaataaatgagcgagtgctagagagagtgctcaaaagagagtgttgctagcatt 13919781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 427 - 607
Target Start/End: Original strand, 33008100 - 33008276
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcca 526  Q
    |||||||||||| |||||||| ||||||  |||||||||||| | ||| ||||||||||| | |||||| ||||| |||| | ||||| | ||||||| |    
T  33008100 tgaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttcta 33008199  T
Q  527 tttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgct 607  Q
    ||||||| ||||| | |   || |||||| | |||||||||||| |||| |||   |||||| ||||||||||||||||||    
T  33008200 tttccaatgtgta-gacccacaatgatttaaaccaataaaagagagagtatta---agagtgttcaaaagagagtgttgct 33008276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 549 - 620
Target Start/End: Original strand, 31502579 - 31502650
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||||||||| ||||||||||||||||||||||||||| || | ||||| ||||||||||||||||| |||||    
T  31502579 ttgatttcatccaataaaagagtgagtgttagagagactgttgaaaagtgagtgttgctagcattcctcttt 31502650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 611
Target Start/End: Complemental strand, 2520698 - 2520636
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||||||||||||||||||||||||||| ||||||||| | ||||||||||||| ||||||    
T  2520698 ttgatttcacccaataaaagagtgagtgttggagagagtgttgaaaagagagtgttcctagca 2520636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 621
Target Start/End: Complemental strand, 32205153 - 32205072
Alignment:
Q  537 gtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttta 621  Q
    ||||| ||| ||||||||||| |||||||||||||||||   |||||||||| ||||||| ||||||||||||||||| ||||||    
T  32205153 gtaggacatacattgatttcatccaataaaagagtgagt---agagagagtgttcaaaagtgagtgttgctagcattcctcttta 32205072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 548 - 613
Target Start/End: Original strand, 24539237 - 24539302
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||| | ||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  24539237 attgattttatccaataaaagagtgagtgttagagagagtgtccaaaagagagtgtcgctagcatt 24539302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 547 - 619
Target Start/End: Original strand, 26703553 - 26703623
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||||||||||||||||||||||||||| |||||||| || |||||  |||||||||||||||||| ||||    
T  26703553 cattgatttcacccaataaaagagtgagtgctagagagaatgctcaaa--agagtgttgctagcattcctctt 26703623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 547 - 619
Target Start/End: Original strand, 19422947 - 19423019
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    ||||||||||| ||||| |||||||||||| ||||||||||| | ||||| ||||||||||| ||||||||||    
T  19422947 cattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctaacattcttctt 19423019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 550 - 614
Target Start/End: Complemental strand, 33008168 - 33008104
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||| |||||||||||||||||| |||||| |||| ||||||| |||||||||||||||||    
T  33008168 tgatttcatccaataaaagagtgagtgctagagatagtgttcaaaagtgagtgttgctagcattc 33008104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 426 - 585
Target Start/End: Complemental strand, 10619576 - 10619419
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    ||||||||||||| |||||||||||||||  |||| ||||||| |   | ||| || |||||| |||||||| ||||||||   ||||||| ||||||||    
T  10619576 atgaggaatgctagcaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatatatatcccatcactttatgtgggttcc 10619478  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagaga 585  Q
    |||  ||||||||| || |  ||||||||||||| ||||||||||| | || ||||||||    
T  10619477 attgacaaagtgtaagtta-acattgatttcacctaataaaagagtaaatgctagagaga 10619419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 19494452 - 19494519
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||||||||||||  |||||| |||  ||||||||||||| |||||||||||    
T  19494452 cattgatttcacccaataaaagagtgagtactagagaaagtactcaaaagagagtgctgctagcattc 19494519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 25428592 - 25428659
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||| ||||||||||||||||  || | |||||| |||||||||||||||||||||||||    
T  25428592 cattgatttcacacaataaaagagtgagtactaaaaagagtgctcaaaagagagtgttgctagcattc 25428659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 548 - 614
Target Start/End: Original strand, 10619506 - 10619571
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||||| || |||||  ||| |||||||||||||||||||||||||||||||||||||    
T  10619506 attgatttcacccaa-aagagagtaggtgctagagagagtgatcaaaagagagtgttgctagcattc 10619571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 547 - 617
Target Start/End: Complemental strand, 14795198 - 14795128
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttc 617  Q
    ||||||||||| ||||||||| ||||| || ||||||||||| | ||||| ||||||||||||||||||||    
T  14795198 cattgatttcatccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttgctagcattcttc 14795128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 547 - 617
Target Start/End: Complemental strand, 15242190 - 15242120
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttc 617  Q
    ||||||||||| ||||||||| ||||| || ||||||||||| | ||||| ||||||||||||||||||||    
T  15242190 cattgatttcatccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttgctagcattcttc 15242120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 613
Target Start/End: Complemental strand, 17749760 - 17749695
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||| | ||||||||||||||||||||||||||||||  ||||| ||||||| |||||||||    
T  17749760 attgattttatccaataaaagagtgagtgttagagagagtgtccaaaaaagagtgtcgctagcatt 17749695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 27888349 - 27888276
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||||||||| | ||||| | || ||||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  27888349 cattgattttatccaatgagagggtgagtgttagagagagtgctcaaaagtgagtgttgctagcattcctcttt 27888276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 13919966 - 13919894
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||| ||||||||||||||| ||||| ||||||| | ||| || |||||||||| |||||||||||    
T  13919966 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 13919894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 497
Target Start/End: Original strand, 19840876 - 19840948
Alignment:
Q  425 tatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaat 497  Q
    |||||||||||||| ||||||||| ||||| ||||| ||||||| | ||| ||||||||||||| ||||||||    
T  19840876 tatgaggaatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaat 19840948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 561 - 613
Target Start/End: Original strand, 27949402 - 27949454
Alignment:
Q  561 aataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  27949402 aataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 27949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 553 - 613
Target Start/End: Complemental strand, 41873495 - 41873435
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||||||| |||||||||||||||||||| |  |||||||||||| ||||||||    
T  41873495 tttcacccaataaaaaagtgagtgttagagagagtgctagaaagagagtgttcctagcatt 41873435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 430 - 611
Target Start/End: Complemental strand, 48374618 - 48374440
Alignment:
Q  430 ggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccattt 529  Q
    ||||||||| |||||||| ||||||  ||||  |||||||| ||| ||||||||||  |  |||  ||| || |||| | ||||| ||||||||| ||||    
T  48374618 ggaatgctagcaacactcacttttgaacact--ctctagtactcactcttttattgaatggaattcatgcatgtcccaccactttctatgggttctattt 48374521  T
Q  530 ccaaagtgtagg-tcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||||   |||  || | |||| | |||| || ||||||||| |||||||||||| ||||||||||||||||||||||    
T  48374520 ccaaagtgtatactca--caataatttaaaccaacaagagagtgagtattagagagagtgttcaaaagagagtgttgctagca 48374440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 22190006 - 22189939
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| |||||||||||||||||| ||||||||||| | ||||  ||||||| |||||||||    
T  22190006 cattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaaatgagtgtttctagcattc 22189939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 618
Target Start/End: Original strand, 32212982 - 32213053
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttct 618  Q
    ||||||||||| |||||||||||  ||||| ||||||||||| | ||||| ||||||| |||||||||||||    
T  32212982 cattgatttcatccaataaaagatagagtgctagagagagtgttaaaaagtgagtgttactagcattcttct 32213053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 552 - 603
Target Start/End: Original strand, 43930078 - 43930129
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  43930078 atttcacccaataaaagagtgagtgttagagagagtgttagaaagagagtgt 43930129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 440 - 603
Target Start/End: Complemental strand, 47822153 - 47821990
Alignment:
Q  440 caacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgta 539  Q
    |||||||||||||   ||||| ||||||  | ||| |||| |||||||| ||| | ||||  ||| | | ||||||| |||| ||||||||||| ||||     
T  47822153 caacactctctttcaagcactctctctaacactcactcttctattgggtgaaacccatgtggatctcaccactttatgtgggatccatttccaatgtgtg 47822054  T
Q  540 ggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    |  |   ||| |||||||||||||| ||||||||||||||||||||||| |  |||||||||||    
T  47822053 gtacccacatggatttcacccaatataagagtgagtgttagagagagtgctagaaagagagtgt 47821990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 613
Target Start/End: Original strand, 31959970 - 31960036
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||| |||||| ||||||||  |||||||| ||||||||||| |||||||||||||||| |||||||    
T  31959970 cattaatttcatccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgttagcatt 31960036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 2520712 - 2520777
Alignment:
Q  556 cacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttta 621  Q
    ||||||||||| | ||||||| ||| ||||||| | ||||||||||||||||||||||| ||||||    
T  2520712 cacccaataaatgtgtgagtgatagtgagagtgttgaaaagagagtgttgctagcattcctcttta 2520777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 559 - 612
Target Start/End: Complemental strand, 6580055 - 6580002
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  6580055 ccaataagagagtgagtattagagagagtgttcaaaagagagtgttggtagcat 6580002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 550 - 611
Target Start/End: Original strand, 20954798 - 20954859
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||| | ||||||||| |||||||||| ||||||||| | ||||||||||||||||||||    
T  20954798 tgatttaagccaataaaaaagtgagtgtttgagagagtgttgaaaagagagtgttgctagca 20954859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 512 - 569
Target Start/End: Complemental strand, 21963229 - 21963172
Alignment:
Q  512 tttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaaga 569  Q
    ||||| || |||||||||||||||||||| || | |||||||||||||||||||||||    
T  21963229 tttatgtgagttccatttccaaagtgtagatcctacattgatttcacccaataaaaga 21963172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 549 - 610
Target Start/End: Complemental strand, 27949338 - 27949277
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagc 610  Q
    ||||||||| |||||| ||||||||||||||||||||||| | ||||| |||||||| ||||    
T  27949338 ttgatttcatccaatacaagagtgagtgttagagagagtgttaaaaagtgagtgttgttagc 27949277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 462 - 613
Target Start/End: Original strand, 46517322 - 46517472
Alignment:
Q  462 tctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtagg-tcatgcattgatttcaccc 560  Q
    ||||||| | ||| || |||||||| ||||||||||||||||||| | | | | |  |||||| |||| ||||||||||  |||  || |||||| | ||    
T  46517322 tctctagcactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaattttcaaagtgtagactca--caatgatttaaacc 46517419  T
Q  561 aataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||| ||| ||||| ||||||||  || ||||||||||||||||||||||||    
T  46517420 aataagagaatgagtattagagaggctgttcaaaagagagtgttgctagcatt 46517472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 47822101 - 47822154
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgc 606  Q
    |||||||||||| ||||||||||||||||||||||| |  ||||||||||||||    
T  47822101 tttcacccaatagaagagtgagtgttagagagagtgcttgaaagagagtgttgc 47822154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 610
Target Start/End: Complemental strand, 32213049 - 32212872
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttc 530  Q
    ||||||||  ||||||| |||||   |||| ||||||| | ||  ||||||||||| | |||||||||||| || | ||||||| |||| |||| ||||     
T  32213049 gaatgctagtaacactcactttttaacactctctctagcactctatcttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttt 32212950  T
Q  531 caaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagc 610  Q
     ||| |||||  ||  || |||||| | ||||||| ||||||||| ||| | || ||| |||||||||||||||||||||    
T  32212949 taaaatgtagccca--caatgatttaaaccaataagagagtgagtattatatagggtgttcaaaagagagtgttgctagc 32212872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 45909523 - 45909455
Alignment:
Q  547 cattgatttcacccaat-aaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||||||| |||||||||| || ||| ||||||| |||||||| ||||||| ||||||||    
T  45909523 cattgatttcacccaataaaaagagtgaatgctagggagagtgctcaaaagatagtgttgatagcattc 45909455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 480 - 574
Target Start/End: Original strand, 46067987 - 46068079
Alignment:
Q  480 ttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgag 574  Q
    ||||||| | |||||||||||| | || | ||||||| |||||||||||||| || |||||| ||  ||||||||| |||||||||||| |||||    
T  46067987 ttattggttgaaatcaatgtatgttccaccactttatgtgggttccatttccgaattgtaggaca--cattgatttaacccaataaaagtgtgag 46068079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 11824138 - 11824072
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||| |||||||||||||||||| ||||||||| | | ||||  ||||||||||| ||||    
T  11824138 cattgatttcatccaataaaagagtgagtgctagagagagcgttgaaaaatgagtgttgctaacatt 11824072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 609
Target Start/End: Original strand, 23934022 - 23934084
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctag 609  Q
    ||||||||| ||||||||||||||| |||| |||| | |||| | ||||||||||||||||||    
T  23934022 cattgattttacccaataaaagagtaagtgctagacaaagtgcttaaaagagagtgttgctag 23934084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 426 - 496
Target Start/End: Complemental strand, 26190091 - 26190021
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaa 496  Q
    ||||||| || ||||||||||||||||||  |||| ||||||  | ||| |||||||||||||||||||||    
T  26190091 atgaggagtgataacaacactctcttttgaacactttctctaacactcactcttttattgggtaaaatcaa 26190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 26459072 - 26459150
Alignment:
Q  510 actttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    ||||||| ||||||||||||| ||||||||||||   ||||| ||| ||| ||||||| |||||||  |||||||||||    
T  26459072 actttatgtgggttccatttctaaagtgtaggtcccacattgtttttacctaataaaaaagtgagttctagagagagtg 26459150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 430 - 500
Target Start/End: Original strand, 26703436 - 26703506
Alignment:
Q  430 ggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||| |||||||||||| || ||||| ||||||| | ||| ||||||||||||| |||| ||||||    
T  26703436 ggaatgctagcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaataaatgta 26703506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 613
Target Start/End: Original strand, 42887741 - 42887807
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||| |||||| ||||||||||| ||||| || ||||||||||||||||||| | || ||||||||    
T  42887741 cattggtttcactcaataaaagagcgagtgctaaagagagtgatcaaaagagaattttactagcatt 42887807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 608
Target Start/End: Complemental strand, 46994424 - 46994366
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgcta 608  Q
    |||||| | ||||||||| |||||||||||||||||| | | |||||||||||||||||    
T  46994424 tgatttaagccaataaaaaagtgagtgttagagagagcgttaaaaagagagtgttgcta 46994366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 6953989 - 6954030
Alignment:
Q  247 atattgttgaaatattaacattctttttgaagcgcataaaaa 288  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  6953989 atattgttgaaatattaacattctttttggagcgcagaaaaa 6954030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 462 - 609
Target Start/End: Original strand, 11692210 - 11692356
Alignment:
Q  462 tctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtagg-tcatgcattgatttcaccc 560  Q
    |||||| |||||| ||||||||||| | |||||||||||| |||  | ||||| | | ||||| |||| |||||||||   |||  || |||||| | |     
T  11692210 tctctaatattcactcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactca--cagtgatttaaact 11692307  T
Q  561 aataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctag 609  Q
    ||||  ||||||||| |||||||| ||| ||||||||||||||||||||    
T  11692308 aatatgagagtgagtattagagagtgtgttcaaaagagagtgttgctag 11692356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 613
Target Start/End: Original strand, 39254211 - 39254264
Alignment:
Q  560 caataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||| ||||||||||||| |||||||| |||||||||| ||||| |||||||    
T  39254211 caataagagagtgagtgttaaagagagtgttcaaaagagaatgttgttagcatt 39254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 614
Target Start/End: Original strand, 42863569 - 42863614
Alignment:
Q  569 agtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||| | ||||| |||||||||||||||||    
T  42863569 agtgagtgttagagagagtgtttaaaagtgagtgttgctagcattc 42863614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 46068005 - 46067940
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgtta-gagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||||| |||||||  |||||||||||| ||||||| | | ||||||||||||||||||||    
T  46068005 cattgatttcaaccaataagggagtgagtgttaagagagagcgctaaaaagagagtgttgctagca 46067940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 440 - 500
Target Start/End: Original strand, 25428485 - 25428545
Alignment:
Q  440 caacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||||||| ||||| ||| ||| | ||| ||||||||||| |||||||||||||    
T  25428485 caacactctcttttgagcactctctttagcactcactcttttattggataaaatcaatgta 25428545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 606
Target Start/End: Original strand, 32205076 - 32205250
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| |||||||| ||||||  |||| ||||   || ||| ||||||||||| | |||||||||||| |||  | | ||| | ||||||| ||    
T  32205076 gaggaatgctagcaacactcacttttgaacactctctc---tactcactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaat 32205172  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgc 606  Q
    ||  ||||| |||||| | || |||||| | | ||||| ||||||||| ||||||||  || |||||||| ||||||||    
T  32205173 ttttaaagtataggtc-tacaatgatttaaactaataagagagtgagtattagagaggatgttcaaaagaaagtgttgc 32205250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 37549621 - 37549693
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||| ||||||||||||||| ||||| ||||||| | | | ||||||||||| | || ||||||||    
T  37549621 gaggaatgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgta 37549693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 613
Target Start/End: Original strand, 6442283 - 6442346
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||| | ||||||||||||||||| ||| ||| |||| |||||||| |||||||||| ||||    
T  6442283 tgatttaaaccaataaaagagtgagtattaaagatagtgttcaaaagaaagtgttgctaacatt 6442346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 611
Target Start/End: Complemental strand, 14759709 - 14759646
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||||| ||||||||||||||||| ||| ||||||  ||||||||  |||||| |||||    
T  14759709 attgatttcactcaataaaagagtgagtgctagggagagtactcaaaagattgtgttgttagca 14759646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 613
Target Start/End: Original strand, 34281017 - 34281104
Alignment:
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||| ||||||||  ||| | ||||| ||| ||| |||||||||   ||||||||||||| || |||||||||||||||| |||||||    
T  34281017 attttcaaagtgtgagtcctacattggttttacctaataaaagaacaagtgttagagagaatgttcaaaagagagtgttgatagcatt 34281104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 604
Target Start/End: Original strand, 36738579 - 36738630
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    ||||||||||||  ||||||||||||||| |||||| | |||||||||||||    
T  36738579 tttcacccaataggagagtgagtgttagaaagagtgctaaaaagagagtgtt 36738630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 613
Target Start/End: Complemental strand, 44350864 - 44350801
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||| | |||| |||||||||||| |||||||  ||| |||||||||||||||| |||||||    
T  44350864 tgatttaaaccaacaaaagagtgagtattagagatggtgttcaaaagagagtgttgttagcatt 44350801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 610
Target Start/End: Original strand, 44511049 - 44511112
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagc 610  Q
    ||||||||||| ||||||||| |||||||| ||||||||||| | |||||  ||||||| ||||    
T  44511049 cattgatttcatccaataaaaaagtgagtgctagagagagtgttgaaaagtaagtgttgttagc 44511112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 27320292 - 27320226
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||| |  ||||||||||||||||||| ||||||||| | ||||  || |||||||||||||    
T  27320292 cattgattttattcaataaaagagtgagtgttggagagagtgttgaaaaatgaatgttgctagcatt 27320226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 502
Target Start/End: Complemental strand, 31960036 - 31959966
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtata 502  Q
    ||||||||||||||||||||||| ||||| ||||||| | ||| |  |||||||| | |||| ||||||||    
T  31960036 aatgctaacaacactctcttttgagcactctctctagcactcacttatttattggatgaaattaatgtata 31959966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 434 - 500
Target Start/End: Complemental strand, 45909636 - 45909570
Alignment:
Q  434 tgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||| |||||||||||||||   ||| ||||||  | ||| |||||||||||||||||||||||||    
T  45909636 tgctagcaacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgta 45909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 46517358 - 46517287
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||||||||| | |||||||| ||||||||| ||||||| || |  ||||| ||||||||||||||||| |||||    
T  46517358 cattgattttatccaataaatgagtgagtgctagagagtgtta--aaaagtgagtgttgctagcattcatcttt 46517287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 588
Target Start/End: Complemental strand, 7775067 - 7775026
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    ||||||||||| |||||||||||||||||| || ||||||||    
T  7775067 cattgatttcatccaataaaagagtgagtgctatagagagtg 7775026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 613
Target Start/End: Complemental strand, 25980811 - 25980750
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||| |||||| |||||||||| |||||||||||| |  ||| |||||||| ||||||||    
T  25980811 atttcatccaatagaagagtgagttttagagagagtgttagaaatagagtgttcctagcatt 25980750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 567
Target Start/End: Complemental strand, 31959917 - 31959860
Alignment:
Q  510 actttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaa 567  Q
    ||||||| ||||||| ||||||||||||| |||| | |||| ||||||| ||||||||    
T  31959917 actttatgtgggttctatttccaaagtgtgggtcctacattaatttcactcaataaaa 31959860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 599
Target Start/End: Complemental strand, 32055640 - 32055591
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagaga 599  Q
    |||||||| |||||||| |||| ||||||||||| |||| ||||||||||    
T  32055640 tgatttcatccaataaatgagttagtgttagagatagtgttcaaaagaga 32055591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 8e-54; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 426 - 617
Target Start/End: Complemental strand, 28898222 - 28898031
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    ||||||||||||| ||||||||| ||||| ||||| ||||||| | ||| ||||||||||||| |||||||||||| |||| | ||||||| |||||| |    
T  28898222 atgaggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttc 28898123  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttc 617  Q
    ||||||||||||||| || | ||||||||||| |||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||    
T  28898122 atttccaaagtgtagatcctacattgatttcatccaataaaagagtgagtgctaaagagagtactcaaaagagagtgttgctagcattcttc 28898031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 431 - 614
Target Start/End: Original strand, 42182889 - 42183072
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttc 530  Q
    |||||||| ||||||||||||||| ||||| ||||||| | ||| ||||||||||||| |||||||||||| |||| | ||||||| |||||||||||||    
T  42182889 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 42182988  T
Q  531 caaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||   ||||||||| ||||||||||||||| |||||||||    
T  42182989 caaagtgtaggtcctacattgatttcacccaataaaagagttagtgccggagagagtgttcaaaagagagtgttactagcattc 42183072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 425 - 619
Target Start/End: Original strand, 37228492 - 37228687
Alignment:
Q  425 tatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggt-aaaatcaatgtatatccctctactttatatgggtt 523  Q
    |||||| ||||||| ||||||||||||||| ||||| ||||||| | ||| ||||||||||||| ||||| ||||||| |||| | ||||||| ||||||    
T  37228492 tatgagaaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccactttatgtgggtt 37228591  T
Q  524 ccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    || ||| ||||||| ||||| | ||||||||||||||||||||| |||||||| |||| |||||| |||||||||||||||| |||| ||| ||||    
T  37228592 ccgttttcaaagtgcaggtcctacattgatttcacccaataaaaaagtgagtgctagaaagagtgctcaaaagagagtgttggtagccttcctctt 37228687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 428 - 608
Target Start/End: Original strand, 1110195 - 1110375
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| ||||||||||||| | ||| | ||||||  | ||| |||||||||| || |||||||||||| |||| | ||||||| ||||||||||    
T  1110195 gaggaatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtgggttccat 1110294  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgcta 608  Q
    ||||||||| || ||| | ||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||||||    
T  1110295 ttccaaagtatatgtcctacattgatttcacccaataaaagagtgaatgttagaaagagtgctcaaaaaagagtgttgcta 1110375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 427 - 613
Target Start/End: Complemental strand, 4964857 - 4964671
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcca 526  Q
    |||||||||||| ||||| ||||||||| | ||| ||||||| | ||| | ||||||||||| |||||||||||| |||| | ||||||| ||| || ||    
T  4964857 tgaggaatgctagcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtggatttca 4964758  T
Q  527 tttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||| ||||||||||||| | ||||||| | | |||||||||||||||||| ||||||||||  |||||||||||| |||||||||||    
T  4964757 ttttcaaagtgtaggtcctacattgatcttatccaataaaagagtgagtgctagagagagtattcaaaagagagtattgctagcatt 4964671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 427 - 588
Target Start/End: Complemental strand, 31395629 - 31395468
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcca 526  Q
    ||||||||| || ||||||||||||||| ||||| ||| ||| | ||| || |||||||||| |||||||||||| |||||| ||||||| ||| |||||    
T  31395629 tgaggaatgttagcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgtatgtccctccactttatgtggattcca 31395530  T
Q  527 tttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    |||||| |||||||||| | |||| |||||||||||||||||| |||||| |||||||||||    
T  31395529 tttccatagtgtaggtcctacatttatttcacccaataaaagattgagtgctagagagagtg 31395468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 427 - 620
Target Start/End: Original strand, 15508910 - 15509103
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcca 526  Q
    ||||||||| || |||||||||||||||  |||| | ||||  | ||| |||||||||| || |||||||||||| |||| | | ||| | |||||||||    
T  15508910 tgaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttcca 15509009  T
Q  527 tttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    |||||||||||||| || | ||||||||||||||||| ||||||| |||| || |||||||| | ||||||||||||||||| ||||| |||||    
T  15509010 tttccaaagtgtagatcctacattgatttcacccaattaaagagtaagtgatatagagagtgctaaaaagagagtgttgctaacattcctcttt 15509103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 431 - 620
Target Start/End: Complemental strand, 37398994 - 37398805
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttc 530  Q
    |||||||||||||||||| ||||  ||||| |||||| || ||| |||||||||| || |||||||| ||| |  | | | |||||||| |||  ||||     
T  37398994 gaatgctaacaacactctattttaagcactctctctaatactcaatcttttattgagtgaaatcaatatatgtttcaccattttatatgagttttatttt 37398895  T
Q  531 caaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||||||||||||| | ||| ||||||| ||||||||| ||| ||||||||||||| || |||||| |||||||||||||||||| |||||    
T  37398894 caaagtgtaggtcctacatggatttcatccaataaaaaagtaagtgttagagagaatgctcaaaaaagagtgttgctagcattcctcttt 37398805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 427 - 606
Target Start/End: Complemental strand, 24895449 - 24895272
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcca 526  Q
    |||| ||||||| |||||||||||||||  || |  ||||| || ||| ||||||| ||| |||||||||||||||| || | | ||||| || ||||||    
T  24895449 tgagaaatgctagcaacactctcttttggacagt--ctctaatactcactcttttaatggataaaatcaatgtatattccaccattttatgtgagttcca 24895352  T
Q  527 tttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgc 606  Q
    ||||||||||||| | |   ||||||||| ||||||| |||||||||||||||||||||||   |||||||||| |||||    
T  24895351 tttccaaagtgtatgacccacattgatttaacccaatgaaagagtgagtgttagagagagtatccaaaagagagagttgc 24895272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 42182956 - 42182889
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  42182956 cattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 42182889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 490 - 628
Target Start/End: Original strand, 6315717 - 6315855
Alignment:
Q  490 aaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtga 589  Q
    |||||||||||| | || | ||||||||| |||||||||||||||||||||||| | |||| ||||   ||||||||||||||| | ||| | ||||||     
T  6315717 aaatcaatgtatgttccaccactttatataggttccatttccaaagtgtaggtcctacattaattttttccaataaaagagtgaatattaaaaagagtgc 6315816  T
Q  590 tcaaaagagagtgttgctagcattcttctttaaataatt 628  Q
    |||||||||||||||| |||||||| |||| | ||||||    
T  6315817 tcaaaagagagtgttgttagcattcctcttaatataatt 6315855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 528 - 613
Target Start/End: Complemental strand, 27969004 - 27968919
Alignment:
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||| | || | ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  27969004 ttccaaagtgtaggtcctacactaatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 27968919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 528 - 613
Target Start/End: Original strand, 28091583 - 28091668
Alignment:
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||| | || | ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  28091583 ttccaaagtgtaggtcctacactaatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28091668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 528 - 613
Target Start/End: Original strand, 28101815 - 28101900
Alignment:
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||| | || | ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  28101815 ttccaaagtgtaggtcctacactaatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28101900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 522 - 619
Target Start/End: Complemental strand, 37719926 - 37719829
Alignment:
Q  522 ttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    ||||||||| |||||||| ||| | ||||||||||| |||||||||||||||||| |||| |||||| |||||||||| |||||||||||||| ||||    
T  37719926 ttccatttctaaagtgtatgtcctacattgatttcatccaataaaagagtgagtgctagaaagagtgctcaaaagagaatgttgctagcattcctctt 37719829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 28898150 - 28898217
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  28898150 cattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaaaagagtgttgctagcattc 28898217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 547 - 619
Target Start/End: Complemental strand, 1110265 - 1110193
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||    
T  1110265 cattgatttcactcaataaaagagtgagtgttagagagaatgctcgaaagagagtgttgctagcattcctctt 1110193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 553 - 613
Target Start/End: Complemental strand, 37228559 - 37228499
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  37228559 tttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 37228499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 15508981 - 15508914
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  15508981 cattgatttcactcaataaaagagtgagtgttagaaagagtgttcaaaagagagtgttgctaacattc 15508914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 531 - 625
Target Start/End: Complemental strand, 20951687 - 20951595
Alignment:
Q  531 caaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctttaaata 625  Q
    ||||||||||||| | ||||||||||||||||||||||| | |||| |  |||||||| ||||||||||||||||||||||||| ||||| ||||    
T  20951687 caaagtgtaggtcctacattgatttcacccaataaaagaataagtgct--agagagtgctcaaaagagagtgttgctagcattcctcttttaata 20951595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 432 - 619
Target Start/End: Original strand, 44274236 - 44274421
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttcc 531  Q
    ||||||| |||||||| |||| | ||||| ||||||  ||||| ||||| ||||| |||||||||||||| |||| | ||||| | ||||||| | || |    
T  44274236 aatgctagcaacactcacttt-gagcactctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttc 44274334  T
Q  532 aaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    ||||||||| ||   || |||||| | ||||||| ||||||||||||||||||| |  | |||||||||||||| |||||||| ||||    
T  44274335 aaagtgtagatcca-caatgatttaaaccaataacagagtgagtgttagagagaatatttaaaagagagtgttgttagcattcctctt 44274421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 1107105 - 1107039
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||    
T  1107105 cattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctaacatt 1107039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 547 - 617
Target Start/End: Complemental strand, 45554634 - 45554564
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttc 617  Q
    ||||||||||| |||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||    
T  45554634 cattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattcttc 45554564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 426 - 611
Target Start/End: Original strand, 12989186 - 12989370
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    ||||||||||||| |||||||| |||||   |||| ||| |   | ||| ||||| ||||| | |||||||||||| |||| | ||||| ||||| |||     
T  12989186 atgaggaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattct 12989285  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||| ||||||||  |   || |||||| | ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  12989286 atttccgaagtgtagaccca-caatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagca 12989370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 4964786 - 4964853
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||||||||||| |||||||| ||||||||||  |||||||||| ||||||||||||||    
T  4964786 cattgatttcacccaataaaaaagtgagtgctagagagagtactcaaaagagaatgttgctagcattc 4964853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 424 - 613
Target Start/End: Complemental strand, 26767948 - 26767760
Alignment:
Q  424 atatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggtt 523  Q
    ||||||||||||||| |||||||| |||||   || | ||||||| | | | ||||||| ||| | |||||||||||| |||| | ||||| |  |||||    
T  26767948 atatgaggaatgctagcaacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccactttgtgagggtt 26767849  T
Q  524 ccatttccaaagtgtagg-tcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    | |||| |||| |||||  |||  || |||||| | ||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||    
T  26767848 caattttcaaattgtagactca--caatgatttaaaccaataaaagagtgagtattagatagagtgttcaaaagaaagtgttgctagcatt 26767760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 31395558 - 31395625
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||| |||||    
T  31395558 cattgatttcacccaataaaggagtgagtgctaaagagagtgctcaaaagagagtgttgctaacattc 31395625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 548 - 614
Target Start/End: Original strand, 40535104 - 40535170
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||| |||||||||||||||||||||||||||| ||| || ||||| ||||||| ||||||||    
T  40535104 attgattttacccaataaaagagtgagtgttagagagggtgctcgaaagatagtgttgttagcattc 40535170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 621
Target Start/End: Original strand, 37398928 - 37399001
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttta 621  Q
    ||||||||||| |||||||||| ||||| |||||||||||| | |||| ||||||||| |||||||| ||||||    
T  37398928 attgatttcactcaataaaagattgagtattagagagagtgcttaaaatagagtgttgttagcattcatcttta 37399001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 549 - 613
Target Start/End: Original strand, 6980235 - 6980299
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||| |||||||||||||||||| ||||||||||| | ||||| || |||||||||||||    
T  6980235 ttgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 6980299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 537
Target Start/End: Complemental strand, 18511394 - 18511283
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    ||||||||||||| |||||||| |||||   |||| || |||  | ||| ||||||||||| |||||||||||||| |||| ||| ||||| |||||||     
T  18511394 atgaggaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttca 18511295  T
Q  526 atttccaaagtg 537  Q
    |||| |||||||    
T  18511294 attttcaaagtg 18511283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 18511322 - 18511389
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||| | |||||||||||||||||| ||| ||||||| | ||||| |||||||||||||||||    
T  18511322 cattgattttatccaataaaagagtgagtgatagtgagagtgttaaaaagtgagtgttgctagcattc 18511389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 41805889 - 41805956
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||| | ||||||||||||||||||||| ||| ||||  ||||| ||||||||||||||||||    
T  41805889 cattgattttatccaataaaagagtgagtgttaaagaaagtgtccaaaatagagtgttgctagcattc 41805956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 3804651 - 3804585
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||| ||||||||||||||| ||||| |||||||| | ||||| |||||| |||||||||    
T  3804651 cattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgtagctagcatt 3804585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 9470148 - 9470082
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||| |||||||||||||||||||||||||||| | | ||||  |||| |||||||||||    
T  9470148 cattgatttcatccaataaaagagtgagtgttagagagagcgttgaaaaatgagtattgctagcatt 9470082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 614
Target Start/End: Complemental strand, 11539489 - 11539423
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||| |||||||||||||||||| |||| |||||| ||||||  |||||||| ||||||||    
T  11539489 attgatttcatccaataaaagagtgagtgctagaaagagtgttcaaaaatgagtgttgttagcattc 11539423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 19427360 - 19427431
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||||||||||| ||||| | |||||||||| ||||||| || |  |||||||||||||||||||||||||||||    
T  19427360 cattgatttcatccaatgatagagtgagtgctagagagtgtta--aaaagagagtgttgctagcattcttcttt 19427431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 549 - 606
Target Start/End: Complemental strand, 8009578 - 8009521
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgc 606  Q
    ||||||||| |||| |||| ||||||||||||| |||||| |||||||||||||||||    
T  8009578 ttgatttcatccaacaaaaaagtgagtgttagaaagagtgttcaaaagagagtgttgc 8009521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 478 - 611
Target Start/End: Original strand, 38104295 - 38104427
Alignment:
Q  478 ttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgt 577  Q
    ||||||||| |||||||||||||| | || | ||||||| ||||||||||| |||||||||| | |   |||||| || |  |||| | |||||||||||    
T  38104295 ttttattggataaaatcaatgtatgttccaccactttatttgggttccattcccaaagtgtatgacccacattgaattaattcaatgagagagtgagtgt 38104394  T
Q  578 tagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||| |   ||||||||| ||||||||||    
T  38104395 tagagagag-gtctaaaagagagggttgctagca 38104427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 516
Target Start/End: Original strand, 1107047 - 1107123
Alignment:
Q  440 caacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttat 516  Q
    ||||||||||||||| ||||| ||||||| |  || ||||||||||||| |||||||||||| |||| | |||||||    
T  1107047 caacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttat 1107123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 613
Target Start/End: Complemental strand, 5140029 - 5139969
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||||  |||||||||||||||||||||| |  |||||||||||| ||||||||    
T  5140029 tttcacccaataggagagtgagtgttagagagagtgctagaaagagagtgttcctagcatt 5139969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 6315844 - 6315772
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||||||||||||||||||| ||||| | | || |||||| |||||||||||  ||||| ||||||    
T  6315844 gaggaatgctaacaacactctcttttgagcactctttttaatattcactcttttattggaaaaaattaatgta 6315772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 550 - 613
Target Start/End: Complemental strand, 6980182 - 6980119
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||| | ||||| ||||||||| ||||||| |||| ||||||||||||||||| ||||||    
T  6980182 tgatttcaactaataagagagtgagtattagagaaagtgttcaaaagagagtgttgcaagcatt 6980119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 12989258 - 12989191
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||| ||||||||||||  | |||||||| | ||||| |||||||||||||||||    
T  12989258 cattgatttcatccaatgaaagagtgagtgagaaagagagtgttgaaaagtgagtgttgctagcattc 12989191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 26767874 - 26767941
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||| ||||||||| |||| |||||||| || | ||||| |||||||||||||||||    
T  26767874 cattgatttcatccagtaaaagagtaagtgctagagagaatgttgaaaagtgagtgttgctagcattc 26767941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 618
Target Start/End: Complemental strand, 19190692 - 19190626
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttct 618  Q
    |||||| ||||||| | | |||||||||||||||||| | ||||||||||||  |||||||||||||    
T  19190692 atttcatccaataagaaaatgagtgttagagagagtgcttaaaagagagtgtctctagcattcttct 19190626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 427 - 497
Target Start/End: Complemental strand, 40535174 - 40535104
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaat 497  Q
    |||||||||||||||||||| ||||| | ||||  ||||||  | ||| ||||||||||||||||||||||    
T  40535174 tgaggaatgctaacaacactatctttcgagcaccctctctaacactcactcttttattgggtaaaatcaat 40535104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 44274301 - 44274236
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||| | ||||| ||||||||| |||||||||||||| || |||| ||||||||||||||||    
T  44274301 cattgattttatccaatgaaagagtgaatgttagagagagtgctc-aaagtgagtgttgctagcatt 44274236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 19193545 - 19193500
Alignment:
Q  569 agtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||    
T  19193545 agtgagtgttggagagagtgttgaaaagagagtgttgctagcattc 19193500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 20951603 - 20951673
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||| ||||||||||||||| ||||  ||||||| | | | ||||||||||||| |||||||||||    
T  20951603 gaggaatgctagcaacactctcttttgagcac--tctctagcacttattcttttattgggtgaaatcaatgta 20951673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 611
Target Start/End: Original strand, 38464281 - 38464342
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||| | ||||||| ||||| ||| |||||||||||| |||||||||||| |||||||||    
T  38464281 tgatttaaaccaataagagagtaagtattagagagagtgttcaaaagagagtattgctagca 38464342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 10339833 - 10339768
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||  |||||||||| |||||||| ||||||||||| |||||  ||| ||||||||||||||    
T  10339833 cattgattttccccaataaaatagtgagtgctagagagagtgttcaaa--agattgttgctagcattc 10339768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 524 - 584
Target Start/End: Original strand, 21447197 - 21447257
Alignment:
Q  524 ccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagag 584  Q
    |||||||||||||||| | |   |||||||||||| ||||||||||||| |||||||||||    
T  21447197 ccatttccaaagtgtaagacccacattgatttcacacaataaaagagtgggtgttagagag 21447257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 480 - 608
Target Start/End: Complemental strand, 23463957 - 23463829
Alignment:
Q  480 ttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgtta 579  Q
    |||||| || ||||||||||||||||| ||| |||| ||| ||| ||||| |||| |||| | |   ||||||||| | ||||| || | || |||||||    
T  23463957 ttattgagtgaaatcaatgtatatcccgctattttaaatgagtttcattttcaaattgtatgacccacattgatttaatccaattaaggtgtaagtgtta 23463858  T
Q  580 gagagagtgatcaaaagagagtgttgcta 608  Q
    |||| | || |||||||||| ||||||||    
T  23463857 gagaaaatgttcaaaagagaatgttgcta 23463829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 37228685 - 37228613
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    |||||| |||| ||||||||||||||| ||||| | ||||| | ||| | ||||||||||| |||||||||||    
T  37228685 gaggaaggctaccaacactctcttttgagcactctttctagcactcacttttttattgggtgaaatcaatgta 37228613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 37719831 - 37719903
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||| ||||| ||||||||| ||||| | ||||| | ||| ||||||||||| | |||||||||||    
T  37719831 gaggaatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatgta 37719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 554 - 614
Target Start/End: Original strand, 41546147 - 41546207
Alignment:
Q  554 ttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||| ||||||| ||||||| |||| ||||||||| | ||||||||||| |||||||||||    
T  41546147 ttcatccaataagagagtgaatgtttgagagagtgttgaaaagagagtgatgctagcattc 41546207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 548 - 588
Target Start/End: Original strand, 42579771 - 42579811
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  42579771 attgatttcatccaataaaagagtgagtgtttgagagagtg 42579811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 622
Target Start/End: Original strand, 14715740 - 14715815
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctttaa 622  Q
    ||||||||||| ||||| | |||||||||| |  ||||| || | |||||||||||||| |||| |||||||||||    
T  14715740 cattgatttcatccaatgatagagtgagtgctgtagagaatgttaaaaagagagtgttgttagccttcttctttaa 14715815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 23463939 - 23464006
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||| |||||| | ||||| |||| ||||||||  | |||||||| ||||||||||||||    
T  23463939 cattgatttcactcaataagatagtgaatgtttgagagagtattaaaaagagaatgttgctagcattc 23464006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 611
Target Start/End: Complemental strand, 31494267 - 31494211
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||| ||||||| ||||||||||||||  |||||| | ||||||||||||||||||||    
T  31494267 tttcatccaataagagagtgagtgttag--agagtgttgaaaagagagtgttgctagca 31494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 33678228 - 33678295
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||  |||| ||||| | ||||||| | |||||| ||||||| |||||||||||||||||    
T  33678228 cattgatttcattcaattaaagaataagtgttataaagagtgttcaaaagtgagtgttgctagcattc 33678295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 554 - 584
Target Start/End: Complemental strand, 7709806 - 7709776
Alignment:
Q  554 ttcacccaataaaagagtgagtgttagagag 584  Q
    |||||||||||||||||||||||||||||||    
T  7709806 ttcacccaataaaagagtgagtgttagagag 7709776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 572 - 614
Target Start/End: Original strand, 29806185 - 29806227
Alignment:
Q  572 gagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||| || ||||||||||||||||||| |||||    
T  29806185 gagtgttagagagaatgctcaaaagagagtgttgctaacattc 29806227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 30706407 - 30706449
Alignment:
Q  569 agtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||||||| ||||||||| | ||||||||||||||||||||    
T  30706407 agtgagtgtttgagagagtgttgaaaagagagtgttgctagca 30706449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 490 - 576
Target Start/End: Complemental strand, 33747041 - 33746955
Alignment:
Q  490 aaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtg 576  Q
    |||||||| ||| |||| | ||||||||| ||||||||||| ||||| |||||    ||||| ||||| ||||||||| ||||||||    
T  33747041 aaatcaatatatgtcccaccactttatattggttccatttctaaagtataggttccacattgttttcatccaataaaaaagtgagtg 33746955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 552 - 586
Target Start/End: Original strand, 37285234 - 37285268
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagag 586  Q
    |||||||||||||||||||||||||||||| ||||    
T  37285234 atttcacccaataaaagagtgagtgttagaaagag 37285268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 41805959 - 41805881
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccc 506  Q
    ||||||||||| ||||||||| |||||  |||| ||| ||  | ||| ||||||||||| |||||||||||||| ||||    
T  41805959 gaggaatgctagcaacactctattttggacactttctttaacactcactcttttattggataaaatcaatgtatgtccc 41805881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 611
Target Start/End: Complemental strand, 25238339 - 25238278
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||| | ||||||||| |||||||| |||||| |||| | |||||||||||||| |||||    
T  25238339 tgatttaaaccaataaaaaagtgagtgctagagaaagtgtttaaaagagagtgttgttagca 25238278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 493
Target Start/End: Original strand, 27968919 - 27968980
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaat 493  Q
    ||||||| ||||||||||||||| | ||| ||||||| | ||| ||||||||||||| ||||    
T  27968919 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 27968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 493
Target Start/End: Complemental strand, 28091668 - 28091607
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaat 493  Q
    ||||||| ||||||||||||||| | ||| ||||||| | ||| ||||||||||||| ||||    
T  28091668 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28091607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 493
Target Start/End: Complemental strand, 28101900 - 28101839
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaat 493  Q
    ||||||| ||||||||||||||| | ||| ||||||| | ||| ||||||||||||| ||||    
T  28101900 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 500
Target Start/End: Original strand, 28898034 - 28898103
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    |||||||| ||||||||||||||| | ||| ||| ||| | ||| ||||||||||| | |||||||||||    
T  28898034 gaatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgta 28898103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 5e-46; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 428 - 614
Target Start/End: Complemental strand, 42862604 - 42862418
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    |||||||||||| |||||||||||||| ||||| ||||||| | ||| | ||||||||||| |||||||||||| |||| | ||||||| ||||||||||    
T  42862604 gaggaatgctaataacactctcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 42862505  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    || ||||||||    |||  ||||||||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||||||    
T  42862504 tttcaaagtgtgaaacataaattgatttcacccaataaaagagtgagtgctagatatagtgctcaaaagagagtgttgctagcattc 42862418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 426 - 611
Target Start/End: Original strand, 13069936 - 13070120
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcc 525  Q
    |||||||||||||  || ||||||||||| ||||  ||||||| | ||| ||||||||||| | |||||||||||| | || | ||||||| ||||||||    
T  13069936 atgaggaatgctaggaatactctcttttgagcacactctctagcactcactcttttattgg-tgaaatcaatgtatgttccaccactttatgtgggttcc 13070034  T
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||| ||||||||||||| | ||||||||| || |||||||||||||||||||||||| | || ||||||||||||||||||||||    
T  13070035 attttcaaagtgtaggtcctacattgattttactcaataaaagagtgagtgttagagaaaatgttcaaaagagagtgttgctagca 13070120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 427 - 614
Target Start/End: Original strand, 44832459 - 44832646
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcca 526  Q
    |||||||||||||||||| ||||||||| ||| | | ||||  | ||| | ||||||||||| |||| ||||||| |||| | | ||||| ||| |||||    
T  44832459 tgaggaatgctaacaacattctcttttgagcattctttctatcactcacttttttattgggtgaaattaatgtatgtcccaccattttatgtggattcca 44832558  T
Q  527 tttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||| | ||||||||||||||||||||| | |||||| | ||||||||| |||||||||||||||||||||||||    
T  44832559 tttccaaagtgcaggtcctacattgatttcacccaataaaaaaatgagtgctggagagagtgctcaaaagagagtgttgctagcattc 44832646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 441 - 619
Target Start/End: Complemental strand, 2187983 - 2187806
Alignment:
Q  441 aacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtag 540  Q
    |||||||||||||| ||||| |||||||  |||  ||||||||||||| ||||||||| || |||| | ||||||| ||||||| |||| ||||||||||    
T  2187983 aacactctcttttgagcactctctctagctttcgctcttttattgggtgaaatcaatgaatgtcccaccactttatgtgggttc-attttcaaagtgtag 2187885  T
Q  541 gtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||   ||||| |||||| |||||||| | |||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  2187884 gtcccacattgttttcacacaataaaaaaatgagtgttagagagagtgctcaaaagcgagtgttgctagcattcgtctt 2187806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 444 - 588
Target Start/End: Original strand, 16178597 - 16178740
Alignment:
Q  444 actctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtc 543  Q
    ||||||||||||||||| ||||||| | ||| ||||| |||| || |||||||||||| |||| | ||||||| |||||||||||||||||||||||||     
T  16178597 actctcttttgtgcactctctctagcactcactcttt-attgagtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtt 16178695  T
Q  544 atgcattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
     | ||||||||||| |||||||||||||||| |||||||||||||    
T  16178696 ctacattgatttcatccaataaaagagtgagagttagagagagtg 16178740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 427 - 620
Target Start/End: Original strand, 37315559 - 37315749
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttcca 526  Q
    |||| ||||||| ||||||||||||||| ||||| ||||||  | ||| ||||||   |||| |||||||||||| |||| | ||||||| |  ||| ||    
T  37315559 tgagaaatgctagcaacactctcttttgagcactctctctaacactcactctttt---gggtgaaatcaatgtatgtcccaccactttatgtaagtttca 37315655  T
Q  527 tttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||| ||||| ||||||  | |||||||||||||||||||||||||||||| ||  ||||||| |||||| |||||||||||||||||| |||||    
T  37315656 ttttcaaagcgtaggttctacattgatttcacccaataaaagagtgagtgctaatgagagtgctcaaaaaagagtgttgctagcattcatcttt 37315749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 429 - 614
Target Start/End: Complemental strand, 47237923 - 47237734
Alignment:
Q  429 aggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatt 528  Q
    |||||||||| |||||||||||||||  |||| ||||||| ||||| ||||||||||| | |||||||| ||| |||| | |||||||||  ||| ||||    
T  47237923 aggaatgctatcaacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtcccaccactttatataagtttcatt 47237824  T
Q  529 tccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagag----agtgatcaaaagagagtgttgctagcattc 614  Q
    | ||||||||||||  | |||  |||||| |||||||||||||||||| |||||||    | || |||||||||||||||| ||||||||    
T  47237823 ttcaaagtgtaggttctacatgaatttcatccaataaaagagtgagtgctagagagaattaatgctcaaaagagagtgttgttagcattc 47237734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 490 - 614
Target Start/End: Original strand, 51206102 - 51206226
Alignment:
Q  490 aaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtga 589  Q
    |||||||||||| ||||   ||||||| || ||| ||||| |||| |||||||| | |||||||||||||||||||||||||||||| |||||||||||     
T  51206102 aaatcaatgtatgtcccatcactttatgtgagtttcattttcaaaatgtaggtcctacattgatttcacccaataaaagagtgagtgctagagagagtgc 51206201  T
Q  590 tcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||| ||||    
T  51206202 tcaaaagagagtgttgctagtattc 51206226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 447 - 613
Target Start/End: Complemental strand, 30867096 - 30866930
Alignment:
Q  447 ctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatg 546  Q
    |||||||| ||||||||||||| | ||| | ||||||||| | |||| ||||||| |||| | ||||||| |||||||||||| |||||||||| ||       
T  30867096 ctcttttgagcactatctctagcactcacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatccca 30866997  T
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||| ||||||| ||||||| | |||||| ||||||||||| | ||||||||| ||||||||||||    
T  30866996 cattgttttcacctaataaaaaaatgagtgctagagagagtgtttaaaagagagcgttgctagcatt 30866930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 478 - 613
Target Start/End: Original strand, 39016710 - 39016845
Alignment:
Q  478 ttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgt 577  Q
    ||||||||| | |||||||||||| |||| | | ||||  |||||||||||||||||||||||    | ||||||||| ||| ||||||||||| ||||     
T  39016710 ttttattggatgaaatcaatgtatgtcccaccattttacgtgggttccatttccaaagtgtagtatctacattgattttacctaataaaagagtaagtgc 39016809  T
Q  578 tagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||| ||||||||||||||||||| ||||    
T  39016810 tagagagagtgttcaaaagagagtgttgctaacatt 39016845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 425 - 613
Target Start/End: Original strand, 8108950 - 8109137
Alignment:
Q  425 tatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttc 524  Q
    |||||| ||||||| |||||||| |||||   |||| ||||||| | ||| ||||||||||||| |||||||||||| |||| ||| ||| | |  ||||    
T  8108950 tatgagaaatgctagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttc 8109049  T
Q  525 catttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
     |||| ||||||||||  |   || |||||| | ||||||| | ||||||| |||||||||||| ||||||||||||||||||||||||    
T  8109050 aattttcaaagtgtagaccca-caatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 8109137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 548 - 612
Target Start/End: Complemental strand, 40812103 - 40812039
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  40812103 attgatttcacccaataaaagagtgagtgctagagagagtgttcaaaaaagagtgttgctagcat 40812039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 440 - 578
Target Start/End: Complemental strand, 2088836 - 2088698
Alignment:
Q  440 caacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgta 539  Q
    ||||||||| ||||| | ||| ||||||  | ||| ||||| |||| || |||||||||||| |||| | ||||||| ||| ||||||||||||||||||    
T  2088836 caacactcttttttgagtactctctctaacactcactctttaattgagtgaaatcaatgtatgtcccaccactttatgtggattccatttccaaagtgta 2088737  T
Q  540 ggtcatgcattgatttcacccaataaaagagtgagtgtt 578  Q
    | || |||||| |||| | | ||||||||||||||||||    
T  2088736 gatcctgcattaatttaagctaataaaagagtgagtgtt 2088698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 8109023 - 8108957
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||    
T  8109023 cattgatttcacccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcatt 8108957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 585
Target Start/End: Complemental strand, 41278753 - 41278644
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    |||||||||||||||||| ||||||| |||  | ||||||| |||||||||||| |||| ||| |||| | |||| || ||||||||||||||||| | |    
T  41278753 tcttttattgggtaaaattaatgtatgtcctaccactttatgtgggttccattttcaaaatgttggtcctacattcatatcacccaataaaagagtaaat 41278654  T
Q  576 gttagagaga 585  Q
    ||||||||||    
T  41278653 gttagagaga 41278644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 37315627 - 37315564
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37315627 cattgatttcacccaa---aagagtgagtgttagagagagtgctcaaaagagagtgttgctagcatt 37315564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 480 - 611
Target Start/End: Original strand, 19447180 - 19447311
Alignment:
Q  480 ttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgtta 579  Q
    ||||||||| ||| |||||||| |||| | ||||||| |||||||||||| |||| || ||| |   || |||||| || |||| | ||||||||| |||    
T  19447180 ttattgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactcaattagagagtgagtatta 19447279  T
Q  580 gagagagtgatcaaaagagagtgttgctagca 611  Q
     |||||||| ||||||||||||||||||||||    
T  19447280 aagagagtgttcaaaagagagtgttgctagca 19447311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 547 - 617
Target Start/End: Complemental strand, 43771193 - 43771123
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttc 617  Q
    ||||||||||| |||||||||||||||||  ||||||||||| ||||||| ||||||||||| ||||||||    
T  43771193 cattgatttcatccaataaaagagtgagtcatagagagagtgttcaaaagtgagtgttgctaccattcttc 43771123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 548 - 614
Target Start/End: Original strand, 47237855 - 47237921
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||| ||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||    
T  47237855 attgatttcatccaataaaagagtgaatgctagagagagtgttcaaaagagagtgttgatagcattc 47237921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 428 - 573
Target Start/End: Original strand, 40812034 - 40812179
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    |||| |||||| ||||||||| |||||  |||| ||||||| | ||| ||||||||||||| |||||||| | |||| | | | || |  |||||| |||    
T  40812034 gaggtatgctagcaacactcttttttgaacactctctctagcactcactcttttattgggtgaaatcaatatttatcacaccatttaacgtgggtttcat 40812133  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtga 573  Q
    |||||||||||||||||| |||| |||| | ||||||||| |||||    
T  40812134 ttccaaagtgtaggtcatacattaattttatccaataaaaaagtga 40812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 619
Target Start/End: Original strand, 40991703 - 40991774
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||||||| ||||| |||||||||||| ||||||||||| | ||||| ||||||||||||||||| ||||    
T  40991703 attgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctagcattcctctt 40991774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 42862534 - 42862601
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||  ||||||||    
T  42862534 cattgatttcacccaataaaaaagtgagtgctagagaaagtgctcaaaagagagtgttattagcattc 42862601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 431 - 613
Target Start/End: Original strand, 43771126 - 43771307
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttc 530  Q
    ||||| || |||||||| ||||||  |||| ||||||  | ||| ||||||||||| | |||||||||||| |||| | ||| | | ||||||| ||||     
T  43771126 gaatggtagcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaatttt 43771225  T
Q  531 caaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||  |   || |||||| | ||||||| ||||||||| ||| |||| ||| ||||||||||| ||||||||||||    
T  43771226 caaagtgtagaccca-caatgatttaaaccaataagagagtgagtattaaagagggtgttcaaaagagagcgttgctagcatt 43771307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 608
Target Start/End: Original strand, 2088778 - 2088839
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgcta 608  Q
    |||||||||||| |||| |||||||||||||||||||||||  |||||| ||||||||||||    
T  2088778 cattgatttcactcaattaaagagtgagtgttagagagagtactcaaaaaagagtgttgcta 2088839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 601
Target Start/End: Complemental strand, 25719244 - 25719123
Alignment:
Q  480 ttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgtta 579  Q
    ||||||| | |||||||||||| |||| | ||||||| |||||| |||||||||| |||||| |   || |||||| ||||||| | ||||||||| |||    
T  25719244 ttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgatttaacccaatcagagagtgagtatta 25719145  T
Q  580 gagagagtgatcaaaagagagt 601  Q
    |||| | || ||||||||||||    
T  25719144 gagaaattgttcaaaagagagt 25719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 428 - 497
Target Start/End: Original strand, 42862415 - 42862484
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaat 497  Q
    ||||||||||| ||||||||||||||| ||||||| ||||| | ||| ||||||||||||| ||||||||    
T  42862415 gaggaatgctagcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaat 42862484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 553 - 613
Target Start/End: Complemental strand, 37306465 - 37306405
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||| ||||||||||||||||||||||| |  |||||||||||| ||||||||    
T  37306465 tttcacccaatataagagtgagtgttagagagagtgctagaaagagagtgttcctagcatt 37306405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 13070007 - 13069941
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||||| |||||||||||||||| ||||||| ||| |||||||||||| || |||||||||    
T  13070007 cattgatttcacc-aataaaagagtgagtgctagagagtgtgctcaaaagagagtattcctagcattc 13069941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 429 - 500
Target Start/End: Complemental strand, 51206228 - 51206157
Alignment:
Q  429 aggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    |||||| ||| ||||||||||||||| ||||| ||||||| | ||| ||||||||||||| |||||||||||    
T  51206228 aggaatactagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 51206157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 613
Target Start/End: Original strand, 2187926 - 2187992
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||||||||||| ||  | ||||||||||| ||||||||||||||| ||| ||||    
T  2187926 cattgatttcacccaataaaagagcgaaagctagagagagtgctcaaaagagagtgttcctaacatt 2187992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 560 - 610
Target Start/End: Original strand, 20454666 - 20454716
Alignment:
Q  560 caataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagc 610  Q
    |||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  20454666 caataacagagtgagtgttagagagagtgttcaaaagagaatgttgctagc 20454716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 39016730 - 39016664
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||| ||||||||| ||| ||||||| |||||||| | |||||||| |||||||||||||    
T  39016730 cattgatttcatccaataaaatagtaagtgttatagagagtgtttaaaagagaatgttgctagcatt 39016664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 426 - 516
Target Start/End: Original strand, 48608075 - 48608165
Alignment:
Q  426 atgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttat 516  Q
    ||||||||||||||||||||||||||||  | ||| ||| ||  ||||| ||||||||||| |||||| ||||||| |||| | |||||||    
T  48608075 atgaggaatgctaacaacactctcttttaagtactttctttaacattcactcttttattggataaaattaatgtatgtcccaccactttat 48608165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 543 - 614
Target Start/End: Original strand, 20225450 - 20225519
Alignment:
Q  543 catgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||| |||| || |||||||||||||||||| |  |||||||| ||||||| |||||||||||||||||    
T  20225450 catgcatggattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagcattc 20225519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 44832649 - 44832577
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    ||||||||||| ||||||||||||||| ||||| |||| || | ||| | ||||||||||| |||||||||||    
T  44832649 gaggaatgctagcaacactctcttttgagcactctctccagcactcatttttttattgggtgaaatcaatgta 44832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 613
Target Start/End: Complemental strand, 51475223 - 51475163
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||||| || ||||||||||||||||||| |  |||||||||||| ||||||||    
T  51475223 tttcacccaataagagggtgagtgttagagagagtgctagaaagagagtgttcctagcatt 51475163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 550 - 613
Target Start/End: Complemental strand, 26361370 - 26361307
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||| | |||||||  |||||||| |||||||| ||| ||||||||||||||||||||||||    
T  26361370 tgatttaaaccaataagtgagtgagtattagagagggtgttcaaaagagagtgttgctagcatt 26361307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 44832530 - 44832463
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||| |||||||||||||||| |||||||| |||| ||| || |||||||||| ||||| ||||||||    
T  44832530 cattaatttcacccaataaaaaagtgagtgatagaaagaatgctcaaaagagaatgttgttagcattc 44832463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 609
Target Start/End: Complemental strand, 16178650 - 16178589
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctag 609  Q
    |||||||||||| ||||||| ||||||||| |||||||||||  ||||||||||| |||||||    
T  16178650 cattgatttcactcaataaa-gagtgagtgctagagagagtgcacaaaagagagtattgctag 16178589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 537 - 599
Target Start/End: Original strand, 21776948 - 21777010
Alignment:
Q  537 gtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagaga 599  Q
    ||||| ||| ||||||||| | ||||||||||||||| ||||||||||||||  |||||||||    
T  21776948 gtaggacatacattgattttatccaataaaagagtgaatgttagagagagtgtccaaaagaga 21777010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 608
Target Start/End: Original strand, 5545642 - 5545755
Alignment:
Q  495 aatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaa 594  Q
    ||||||| |||| | ||||||| |||| ||||||| |||| |||| | |   ||||||||| | | ||| ||| ||| ||| |||||||||||| |||||    
T  5545642 aatgtatgtcccaccactttatgtgggctccattttcaaaatgtaagacccacattgatttaagcaaattaaaaagtaagtattagagagagtgttcaaa 5545741  T
Q  595 agagagtgttgcta 608  Q
    ||||||||||||||    
T  5545742 agagagtgttgcta 5545755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 18184100 - 18184059
Alignment:
Q  247 atattgttgaaatattaacattctttttgaagcgcataaaaa 288  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  18184100 atattgttgaaatattaacattctttttggagcgcagaaaaa 18184059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 550 - 606
Target Start/End: Complemental strand, 754642 - 754586
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgc 606  Q
    |||||| | ||||||| ||||||||| |||||||||||| |||||||| ||||||||    
T  754642 tgatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 754586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 613
Target Start/End: Original strand, 6540345 - 6540405
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||||  ||| ||||||||||||||||||||  |||||||||||| ||| ||||    
T  6540345 tttcacccaataggagaatgagtgttagagagagtgatagaaagagagtgttcctaccatt 6540405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 543 - 603
Target Start/End: Original strand, 24106756 - 24106816
Alignment:
Q  543 catgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    ||||||||  ||||| ||||||| |||||| ||||||||||||||| | ||||||||||||    
T  24106756 catgcattagtttcatccaataagagagtgggtgttagagagagtgttgaaaagagagtgt 24106816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 604
Target Start/End: Original strand, 39810529 - 39810581
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    |||| |||||||||||||||| ||||||||||||||| |  ||||||||||||    
T  39810529 attttacccaataaaagagtgggtgttagagagagtgctagaaagagagtgtt 39810581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 619
Target Start/End: Complemental strand, 50571931 - 50571859
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    ||||||||||| | ||||||||||| |||| ||||||||||| | ||||| || |||||||| ||||| ||||    
T  50571931 cattgatttcatctaataaaagagtaagtgctagagagagtgttgaaaagtgactgttgctaacattcctctt 50571859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 722275 - 722330
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttg 605  Q
    |||||| | ||||||| ||||||||| |||||||||||| |||||||| |||||||    
T  722275 tgatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 722330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 614
Target Start/End: Original strand, 24834705 - 24834760
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||| ||||||| | |||||||||| | | |||||||||||||||||||||||    
T  24834705 ccaataagagagtgactattagagagagagtttaaaagagagtgttgctagcattc 24834760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 609
Target Start/End: Original strand, 25719226 - 25719286
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctag 609  Q
    ||||||||||| ||||||| |||||||||||| |||||||||   |||| |||||||||||||    
T  25719226 cattgatttcaaccaataagagagtgagtgtttgagagagtg--taaaaaagagtgttgctag 25719286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 603
Target Start/End: Original strand, 31699598 - 31699649
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    |||||||||||||| |||||||||||| ||||||||| |  |||||||||||    
T  31699598 atttcacccaataagagagtgagtgttggagagagtgttagaaagagagtgt 31699649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 613
Target Start/End: Complemental strand, 34129549 - 34129399
Alignment:
Q  462 tctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcaccca 561  Q
    ||||||| | ||| |||| |||||| | | ||||||||||||||| | ||||| | || |||| |||| |||||||| || |   || || ||| | |||    
T  34129549 tctctagcactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgt-ggactcacaatggtttaaacca 34129451  T
Q  562 ataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||| |||||||  ||| ||| ||||||||||||| ||||||    
T  34129450 ataaaagagtgagtattagagattgtgttcagaagagagtgttgccagcatt 34129399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 39471224 - 39471157
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| | |||||||||||  |||||| |||||||  | ||||| |||||||||||||||||    
T  39471224 cattgatttcatctaataaaagagttggtgttaaagagagtatttaaaagtgagtgttgctagcattc 39471157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 613
Target Start/End: Original strand, 39471275 - 39471338
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||| | ||||||| ||||||||| ||||||||| || | |||||||||||||| |||||||    
T  39471275 tgatttaaaccaataagagagtgagtattagagagaatgtttaaaagagagtgttgttagcatt 39471338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 585
Target Start/End: Complemental strand, 49739009 - 49738950
Alignment:
Q  526 atttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagaga 585  Q
    |||||||||||||| | |   ||| ||||||||| |||||||||||||||||||||||||    
T  49739009 atttccaaagtgtatgacccacatggatttcaccaaataaaagagtgagtgttagagaga 49738950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 50164462 - 50164395
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||| | |||||||| ||||||||| ||||||||||| | ||||| ||||||| |||| ||||    
T  50164462 cattgattttatccaataaatgagtgagtgctagagagagtgttaaaaagtgagtgttactagtattc 50164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 547 - 609
Target Start/End: Complemental strand, 20454607 - 20454545
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctag 609  Q
    ||||||||| | | |||||||||||||||| ||||||||||| | |||||  |||||||||||    
T  20454607 cattgattttatctaataaaagagtgagtgctagagagagtgttgaaaagtaagtgttgctag 20454545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 608
Target Start/End: Complemental strand, 21777010 - 21776848
Alignment:
Q  446 tctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcat 545  Q
    |||||||||  |||| ||||||  ||||| ||||||||||| |||||||||||||| |||  | ||||||| ||| ||  ||||||||| |||| | |      
T  21777010 tctcttttggacactctctctaacattcactcttttattggataaaatcaatgtatgtcctaccactttatgtggattttatttccaaaatgtatgaccc 21776911  T
Q  546 gcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgcta 608  Q
      || ||||| |  | || | ||| ||||||||||||||||||   |||||||||||||||||    
T  21776910 atatcgatttaattcgatgagagaatgagtgttagagagagtgtcaaaaagagagtgttgcta 21776848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 24834645 - 24834579
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||| || |||||||||  ||||| |||||||||||||   ||||| ||||||||||||||||    
T  24834645 cattgattccatccaataaaaatgtgagcgttagagagagtgtcaaaaagtgagtgttgctagcatt 24834579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 559 - 613
Target Start/End: Complemental strand, 27654532 - 27654478
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||| ||| |||||||||||||||||| | ||||||||||||  ||||||||    
T  27654532 ccaataagagaatgagtgttagagagagtgttgaaaagagagtgtccctagcatt 27654478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 611
Target Start/End: Original strand, 27654595 - 27654657
Alignment:
Q  549 ttgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||| | ||||||| | | |||||||| ||||||||| | ||||||||||||||||||||    
T  27654595 ttgatttaaaccaataataaattgagtgtttgagagagtgttgaaaagagagtgttgctagca 27654657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 553 - 611
Target Start/End: Original strand, 33787989 - 33788047
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||| |||||||||| ||||||||||||| |  || | ||||||||||||||||||||    
T  33787989 tttcatccaataaaagtgtgagtgttagagtggatgttgaaaagagagtgttgctagca 33788047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 550 - 608
Target Start/End: Complemental strand, 40991651 - 40991593
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgcta 608  Q
    |||||| | ||||||||||||||||| | |||||||||| |||||| | ||||||||||    
T  40991651 tgatttaaaccaataaaagagtgagtatcagagagagtgttcaaaaaaaagtgttgcta 40991593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 48339465 - 48339515
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctag 609  Q
    ||||||| ||||||||||||| |||||||| |||| || ||||||||||||    
T  48339465 ccaataagagagtgagtgttaaagagagtgctcaatagtgagtgttgctag 48339515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 573 - 611
Target Start/End: Complemental strand, 51904654 - 51904616
Alignment:
Q  573 agtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  51904654 agtgttagagagagtgttgaaaagagagtgttgctagca 51904616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 619
Target Start/End: Original strand, 53870998 - 53871048
Alignment:
Q  569 agtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||||||||||||||||| |  |||| ||||||||||||||||| ||||    
T  53870998 agtgagtgttagagagagtgttggaaagtgagtgttgctagcattcctctt 53871048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 500
Target Start/End: Complemental strand, 13070127 - 13070054
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    |||||| ||||| |||||||||||||||  || | ||||||  | ||| |||||||||| ||||||||||||||    
T  13070127 tgaggagtgctagcaacactctcttttgaacattttctctaacactcactcttttattgagtaaaatcaatgta 13070054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 428 - 540
Target Start/End: Complemental strand, 20225522 - 20225412
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| |||||||| ||||||  ||||  |||||| | ||| ||||||||||| |  |||| ||| || |||| | ||||| | ||||||| ||    
T  20225522 gaggaatgctagcaacactcacttttgaacact--ctctagcactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctat 20225425  T
Q  528 ttccaaagtgtag 540  Q
    |||||||||||||    
T  20225424 ttccaaagtgtag 20225412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 608
Target Start/End: Complemental strand, 22592371 - 22592310
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgcta 608  Q
    |||| |||||| ||||||||||||||||||  ||||||| || ||||||| ||| |||||||    
T  22592371 catttatttcatccaataaaagagtgagtgccagagagaatgttcaaaagtgagcgttgcta 22592310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 500
Target Start/End: Complemental strand, 37315743 - 37315674
Alignment:
Q  431 gaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 500  Q
    |||||||| ||||||||| ||||| ||||| ||  ||| | ||| ||||||||||||| |||||||||||    
T  37315743 gaatgctagcaacactcttttttgagcactctcattagcactcactcttttattgggtgaaatcaatgta 37315674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 613
Target Start/End: Complemental strand, 38537565 - 38537512
Alignment:
Q  560 caataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||| ||| | |||||||||||| |||||||| |||||||||| ||||    
T  38537565 caataaaagaatgattattagagagagtgttcaaaagaaagtgttgctaacatt 38537512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 612
Target Start/End: Complemental strand, 48339393 - 48339340
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    ||||||||||||||  ||||||||| |||| ||||||  |||||||||||||||    
T  48339393 ccaataaaagagtggatgttagagaaagtgctcaaaaacgagtgttgctagcat 48339340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 1e-43; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 433 - 611
Target Start/End: Original strand, 1205829 - 1206007
Alignment:
Q  433 atgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttcca 532  Q
    |||||| ||||||||||||||| ||||| ||| ||| | ||| ||||||||| |||||||| ||||||| || | | ||||||||||||||| |||||||    
T  1205829 atgctagcaacactctcttttgagcactctctttagcactcactcttttattaggtaaaattaatgtatgtctcaccactttatatgggttctatttcca 1205928  T
Q  533 aagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||||||||| | |||||||||||| ||||||||||||||||| || |||||||| |||||| |||||||||| ||||    
T  1205929 aagtgtaggtcttacattgatttcactcaataaaagagtgagtgctaaagagagtgttcaaaatagagtgttgcaagca 1206007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 428 - 610
Target Start/End: Complemental strand, 7599605 - 7599423
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    |||||||| || ||||||||| |||||  |||| ||||||| |   | ||||||||||| | |||||||||||||||||   ||||||| |||||||| |    
T  7599605 gaggaatgttagcaacactcttttttgaacactctctctagcacctactcttttattggatgaaatcaatgtatatcccagcactttatgtgggttcctt 7599506  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagc 610  Q
    |||||||||||||||| | ||||||||| || |||||||| ||||||||||||| ||| || |||||| ||||||||||||||    
T  7599505 ttccaaagtgtaggtcctacattgattttactcaataaaaaagtgagtgttagaaagaatgctcaaaaaagagtgttgctagc 7599423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 432 - 602
Target Start/End: Original strand, 35689481 - 35689651
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttcc 531  Q
    |||| ||| |||||||||||||| ||||| ||||||| | ||| | ||||||||| | |||||||||||| |||| | ||||||| || ||||||||| |    
T  35689481 aatggtaagaacactctcttttgagcactctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttc 35689580  T
Q  532 aaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtg 602  Q
    |||||||| |||   ||||| ||||||||||||||| |||||||| ||||||||||| |||||||||||||    
T  35689581 aaagtgtaagtcccacattgttttcacccaataaaaaagtgagtgctagagagagtgctcaaaagagagtg 35689651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 432 - 611
Target Start/End: Original strand, 6387564 - 6387741
Alignment:
Q  432 aatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttcc 531  Q
    ||||||| |||||||||||||||  ||||  |||||  | ||| ||||||||||| |||||||||||||| |||| | | ||||| ||||||||||||||    
T  6387564 aatgctagcaacactctcttttggacact--ctctaacactcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttcc 6387661  T
Q  532 aaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||||| || | |   ||||| ||| ||||||||| ||| ||||||||||||||||||  |||||| || |||||||||||    
T  6387662 aaagtatacgacccacattgttttaacccaataagagaatgagtgttagagagagtgtccaaaagggattgttgctagca 6387741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 478 - 614
Target Start/End: Complemental strand, 13407457 - 13407321
Alignment:
Q  478 ttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgt 577  Q
    ||||||||| |||||||||||||| |||| | | ||||  ||||||| |||| ||||||||| | |   ||||||||| ||||||| | ||| |||||||    
T  13407457 ttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgatttaacccaatgagagaatgagtgt 13407358  T
Q  578 tagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| |||||||||||||||||||||||||    
T  13407357 tagagagagtgttcaaaagagagtgttgctagcattc 13407321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 428 - 588
Target Start/End: Original strand, 33417680 - 33417839
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||||||||||| ||||||| | ||| ||||| | | |||    |||||| ||| ||||||||| || | || | ||||||| |||||| |||    
T  33417680 gaggaatgctaacaacactttcttttgagtactctctct-gcactcacatctttattaggtgaaatcaatgcatgttccaccactttatgtgggtttcat 33417778  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    |||||||||||||||| | |||| ||||||| ||||||||||||||||| |||||||||||    
T  33417779 ttccaaagtgtaggtcctacattaatttcactcaataaaagagtgagtgctagagagagtg 33417839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 510 - 610
Target Start/End: Complemental strand, 12212226 - 12212126
Alignment:
Q  510 actttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctag 609  Q
    ||||||| ||||  |||||||||||||||||| |   |||||||||||||||| |||||||||| ||||||||||| || | ||||||||||||||||||    
T  12212226 actttatgtgggacccatttccaaagtgtaggacccacattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgctag 12212127  T
Q  610 c 610  Q
    |    
T  12212126 c 12212126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 510 - 610
Target Start/End: Complemental strand, 12456654 - 12456554
Alignment:
Q  510 actttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctag 609  Q
    ||||||| ||||  |||||||||||||||||| |   |||||||||||||||| |||||||||| ||||||||||| || | ||||||||||||||||||    
T  12456654 actttatgtgggacccatttccaaagtgtaggacccacattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgctag 12456555  T
Q  610 c 610  Q
    |    
T  12456554 c 12456554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 613
Target Start/End: Complemental strand, 28212018 - 28211885
Alignment:
Q  479 tttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgtt 578  Q
    |||||||||| |||||||| ||| || | | | ||||| ||||||||||||  ||||| |||||| | |||||||||||||||||||||  |||| ||||    
T  28212018 tttattgggtgaaatcaatatatgtctcaccattttatgtgggttccatttttaaagtataggtcctacattgatttcacccaataaaa-tgtgaatgtt 28211920  T
Q  579 agagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||| | | || ||||||||||||||||||| ||||    
T  28211919 agaaataatgctcaaaagagagtgttgctaacatt 28211885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 428 - 613
Target Start/End: Complemental strand, 1977356 - 1977172
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| ||| |||| |||||   |||| ||||||| | ||| |||| | |||| | |||||||||||| |||  | ||||| | ||||||| ||    
T  1977356 gaggaatgctagcaatactcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaat 1977257  T
Q  528 ttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    || |||||||||| ||   || |||||| | ||||||||||||||||| |||||||| ||| ||||||||| ||||| ||||||||    
T  1977256 tttcaaagtgtagatcca-caatgatttaaaccaataaaagagtgagtattagagagtgtgttcaaaagagtgtgttactagcatt 1977172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 490 - 623
Target Start/End: Complemental strand, 34303559 - 34303426
Alignment:
Q  490 aaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtga 589  Q
    |||||||||||| || | | ||| ||| ||| ||| |||| ||||||||||||| | ||||||||||||||||||||||||| |||| |||||||  ||     
T  34303559 aaatcaatgtatgtctcaccactctatgtggcttcgattttcaaagtgtaggtcttacattgatttcacccaataaaagagttagtgctagagaggatgc 34303460  T
Q  590 tcaaaagagagtgttgctagcattcttctttaaa 623  Q
    | |||||||  |||||||||| ||| ||| ||||    
T  34303459 ttaaaagaggatgttgctagctttcctctataaa 34303426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 550 - 613
Target Start/End: Original strand, 16983512 - 16983575
Alignment:
Q  550 tgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||| | ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  16983512 tgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 16983575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 25915086 - 25915188
Alignment:
Q  488 taaaatcaatgtatatccctctactttatatgggttccatttccaaagtgt--aggtcatgcattgatttcacccaataaaagagtgagtgttagagaga 585  Q
    |||||||||||||| |||  ||||||||| |||||||||||| ||||||||  ||||    |||||||||||||||||||||||||||||  ||| ||||    
T  25915086 taaaatcaatgtatgtcctactactttatttgggttccattttcaaagtgtagaggttccacattgatttcacccaataaaagagtgagtactagggaga 25915185  T
Q  586 gtg 588  Q
    |||    
T  25915186 gtg 25915188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 478 - 552
Target Start/End: Original strand, 43026338 - 43026412
Alignment:
Q  478 ttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattga 552  Q
    ||||||| |||||||||||||||| |||  | ||||||| |||||||||||||||||||||||||| | ||||||    
T  43026338 ttttattaggtaaaatcaatgtatgtcctgccactttatgtgggttccatttccaaagtgtaggtcctacattga 43026412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 612
Target Start/End: Complemental strand, 1205894 - 1205829
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    |||| |||| ||| |||||||||||||||| || |||||||| |||||||||||||||||||||||    
T  1205894 cattaattttacctaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgctagcat 1205829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 510 - 614
Target Start/End: Complemental strand, 23142916 - 23142815
Alignment:
Q  510 actttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctag 609  Q
    ||||||| ||||||||||||||||||| |||||    ||||| ||||||||||||||| | ||| || |  |||||||| ||||||||||||||||||||    
T  23142916 actttatgtgggttccatttccaaagtctaggttccacattgttttcacccaataaaa-aatgaatgct--agagagtgctcaaaagagagtgttgctag 23142820  T
Q  610 cattc 614  Q
    |||||    
T  23142819 cattc 23142815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 35689547 - 35689490
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    ||||||||||| ||||||||| |||||||| ||||||||||| |||||||||||||||    
T  35689547 cattgatttcatccaataaaaaagtgagtgctagagagagtgctcaaaagagagtgtt 35689490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 559 - 619
Target Start/End: Complemental strand, 8914826 - 8914766
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    ||||| |||||||||||||||||||||| | ||||||| ||||||||||||||||| ||||    
T  8914826 ccaatgaaagagtgagtgttagagagagcgctcaaaagtgagtgttgctagcattcctctt 8914766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 559 - 610
Target Start/End: Original strand, 5980006 - 5980057
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagc 610  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||||||    
T  5980006 ccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagc 5980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 6387628 - 6387564
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||| | ||||||||||||||||||||||  ||||||  |||||||||||||||||||||||    
T  6387628 cattgattttatccaataaaagagtgagtgttag--agagtgtccaaaagagagtgttgctagcatt 6387564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 7599535 - 7599602
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| |||||||||||||  ||| ||||||||||| |||||| |||||||||||| |||||    
T  7599535 cattgatttcatccaataaaagagtaggtgctagagagagtgttcaaaaaagagtgttgctaacattc 7599602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 560 - 614
Target Start/End: Original strand, 31691637 - 31691691
Alignment:
Q  560 caataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||||||||||| |||||||  ||||||| |||||||||||||||||    
T  31691637 caataaaagagtgagtgttaaagagagttttcaaaagtgagtgttgctagcattc 31691691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 32072164 - 32072098
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||| |||||| |||||||||||||||||| ||||||||||| | ||||| || |||||||||||||    
T  32072164 cattcatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 32072098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 547 - 588
Target Start/End: Complemental strand, 44709338 - 44709297
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  44709338 cattgatttcacacaataaaagagtgagtgttagagagagtg 44709297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 619
Target Start/End: Original strand, 1977286 - 1977358
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    ||||||||||| |||| | ||||||||||| ||||||||||| | ||||| |||| |||||||||||| ||||    
T  1977286 cattgatttcatccaacagaagagtgagtgctagagagagtgttaaaaagtgagtattgctagcattcctctt 1977358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 605
Target Start/End: Complemental strand, 24055978 - 24055932
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttg 605  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  24055978 ccaataagagagtgagtgttagagaaagtgttcaaaagagagtgttg 24055932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 617
Target Start/End: Original strand, 28413982 - 28414052
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttc 617  Q
    ||||||||||| | ||||||| |||||| | ||||||||||| | ||||| |||||||| |||||||||||    
T  28413982 cattgatttcatcgaataaaaaagtgagcgctagagagagtgttgaaaagtgagtgttgttagcattcttc 28414052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 613
Target Start/End: Complemental strand, 34861245 - 34861191
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||| ||||||||| |||| ||| ||| ||||||||||||||||||||||||    
T  34861245 ccaataagagagtgagtattagggagggtgttcaaaagagagtgttgctagcatt 34861191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 13407437 - 13407510
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||||||||| | ||||||||| ||| ||||||||||||||||  ||||| |||||||||||  ||||| |||||    
T  13407437 cattgattttatccaataaaaaagttagtgttagagagagtgtccaaaaaagagtgttgctgacattcctcttt 13407510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 588
Target Start/End: Original strand, 13856508 - 13856549
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  13856508 cattgatttcatccaataaaagagtgggtgttagagagagtg 13856549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 588
Target Start/End: Complemental strand, 16441867 - 16441830
Alignment:
Q  551 gatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    |||||||| |||||||||||||||||||||||||||||    
T  16441867 gatttcactcaataaaagagtgagtgttagagagagtg 16441830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 613
Target Start/End: Original strand, 23142937 - 23143002
Alignment:
Q  548 attgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||||||| ||| |||| | ||||||||| |||||| |||||||| ||| ||||    
T  23142937 attgatttcacccaataaaaaagtaagtgcttgagagagtgctcaaaaaagagtgttcctaacatt 23143002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 478 - 611
Target Start/End: Original strand, 45246481 - 45246613
Alignment:
Q  478 ttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgt 577  Q
    ||||||||| |||||||||||||| || | | |||||||  | |||| ||||||||||||||| || |||| |||||| |  |||||| |||| | || |    
T  45246481 ttttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatc-tgcaatgatttaaatcaataagagagggggtat 45246579  T
Q  578 tagagagagtgatcaaaagagagtgttgctagca 611  Q
      ||||||||  |||||||||||||||| |||||    
T  45246580 aggagagagtattcaaaagagagtgttgatagca 45246613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 577 - 613
Target Start/End: Original strand, 1961403 - 1961439
Alignment:
Q  577 ttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1961403 ttagagagagtgttcaaaagagagtgttgctagcatt 1961439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 540
Target Start/End: Original strand, 8914768 - 8914880
Alignment:
Q  428 gaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccat 527  Q
    ||||||||||| |||||||| |||||| || || ||||||  | ||| ||||| ||||| ||||| |||||||| |||| | ||||| | |||||||  |    
T  8914768 gaggaatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcatt 8914867  T
Q  528 ttccaaagtgtag 540  Q
    || ||||||||||    
T  8914868 tttcaaagtgtag 8914880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 427 - 499
Target Start/End: Complemental strand, 35689667 - 35689595
Alignment:
Q  427 tgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgt 499  Q
    ||||||||||||||  |||||||||||| ||||| ||||||| | ||| | ||||||||||| ||| ||||||    
T  35689667 tgaggaatgctaacggcactctcttttgagcactctctctagcactcacttttttattgggtgaaaacaatgt 35689595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 45218629 - 45218695
Alignment:
Q  546 gcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    |||||||||||| |||||||||||| ||||||||||||| || || ||||||||||||  |||||||||    
T  45218629 gcattgatttcatccaataaaagagcgagtgttagagagtgt-at-aaaagagagtgtccctagcattc 45218695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 604
Target Start/End: Original strand, 6580950 - 6581001
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgtt 604  Q
    |||||||||||| ||| ||||||||||||||||||| |  ||||||||||||    
T  6580950 tttcacccaatagaagggtgagtgttagagagagtgctagaaagagagtgtt 6581001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 612
Target Start/End: Original strand, 8671078 - 8671129
Alignment:
Q  561 aataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    ||||||| ||||||| |||||||||| | |||||||||| ||||||||||||    
T  8671078 aataaaatagtgagtattagagagagcgttcaaaagagaatgttgctagcat 8671129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Complemental strand, 23685198 - 23685131
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattc 614  Q
    ||||||||||| ||||||||| |||||||| |  ||||||||  |||||| || ||||||||||||||    
T  23685198 cattgatttcatccaataaaatagtgagtgcttaagagagtgtgcaaaagtgaatgttgctagcattc 23685131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 603
Target Start/End: Complemental strand, 28700615 - 28700564
Alignment:
Q  552 atttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    |||| ||||||||| |||||||||||||||||||||| |  |||||||||||    
T  28700615 atttaacccaataagagagtgagtgttagagagagtgttagaaagagagtgt 28700564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 543 - 613
Target Start/End: Original strand, 9952866 - 9952936
Alignment:
Q  543 catgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||||||| ||||||||| | |||||| ||||||||||| | |||||  | |||| ||||||||    
T  9952866 catgcattgatttcatccaataaaaaaatgagtgctagagagagtgttgaaaagtaaatgttactagcatt 9952936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 567 - 613
Target Start/End: Original strand, 11574164 - 11574210
Alignment:
Q  567 agagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||||||||||| |||||||| ||||||||||||||| ||| ||||    
T  11574164 agagtgagtgttaaagagagtgttcaaaagagagtgttcctaacatt 11574210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 476 - 613
Target Start/End: Complemental strand, 17499368 - 17499234
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagt 575  Q
    ||||||||||| | |||||||| ||| |||| | | ||| | | ||||| |||| |||||||||| ||   || |||||| | ||||||| |||||||||    
T  17499368 tcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatcca-caatgatttaaaccaataagagagtgagt 17499270  T
Q  576 gttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
     |||||||||||  |||||  |||||||||||||||||    
T  17499269 attagagagagttgtcaaa--agagtgttgctagcatt 17499234  T

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Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 553 - 603
Target Start/End: Original strand, 33440624 - 33440674
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgt 603  Q
    ||||||||||||| ||||||| |||||||||||||| |  |||||||||||    
T  33440624 tttcacccaataagagagtgaatgttagagagagtgttataaagagagtgt 33440674  T

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Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 34861300 - 34861371
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||||||||||| |||||||||||||||||| |  |||||||| | ||||| ||| | ||||||||||| |||||    
T  34861300 cattgatttcatccaataaaagagtgagtgct--agagagtgttgaaaagtgagaggtgctagcattcctcttt 34861371  T

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Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 619
Target Start/End: Original strand, 38091488 - 38091538
Alignment:
Q  569 agtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    |||||||||| ||||||||| | |||||||| |||||||||||||| ||||    
T  38091488 agtgagtgttggagagagtgttgaaaagagaatgttgctagcattcctctt 38091538  T

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Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 31301182 - 31301109
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttcttt 620  Q
    ||||||||||| ||||||||||||||||||   || | |||| ||||||| |||||||  |||||||| |||||    
T  31301182 cattgatttcatccaataaaagagtgagtgccggaaatagtgttcaaaagtgagtgttattagcattcctcttt 31301109  T

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Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 41727424 - 41727505
Alignment:
Q  425 tatgaggaatgctaacaacactctcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccc 506  Q
    ||||||||||||| ||||||||| ||||||  |||| ||| ||| | ||| |||||| || | |||||||||||||| ||||    
T  41727424 tatgaggaatgctgacaacactcacttttgaacactctctttagcaatcactcttttgttagataaaatcaatgtatgtccc 41727505  T

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Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 619
Target Start/End: Complemental strand, 43506590 - 43506533
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcattcttctt 619  Q
    ||||||||| |||||||||||||||| ||  ||||||| ||||||||||||||||| ||||    
T  43506590 ccaataaaa-agtgagtgttagagagtgt--tcaaaagtgagtgttgctagcattcctctt 43506533  T

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Target: scaffold0054 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 510 - 619
Target Start/End: Complemental strand, 31014 - 30905
Alignment:
Q  510 actttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctag 609  Q
    |||||||||||||||| ||| ||||||||||||  | ||||||| ||||||||||||| ||||| || |||| |||||  ||||||||||||||||||||    
T  31014 actttatatgggttccgttttcaaagtgtaggttctacattgatgtcacccaataaaaaagtgaatgctagaaagagtactcaaaagagagtgttgctag 30915  T
Q  610 cattcttctt 619  Q
    | ||| ||||    
T  30914 ccttcctctt 30905  T

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Target: scaffold0099 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 584
Target Start/End: Original strand, 27358 - 27468
Alignment:
Q  476 tcttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtg-taggtcatgcattgatttcacccaa-taaaagagtga 573  Q
    ||||||||||||| |||||||| ||| |||| | ||||||| | |||||||||| ||||||| || ||| | |||||||||||||||| |||||||||||    
T  27358 tcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgttatgtcctacattgatttcacccaattaaaagagtga 27457  T
Q  574 gtgttagagag 584  Q
    ||| |||||||    
T  27458 gtgctagagag 27468  T

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Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 477 - 611
Target Start/End: Original strand, 27858 - 27991
Alignment:
Q  477 cttttattgggtaaaatcaatgtatatccctctactttatatgggttccatttccaaagtgtaggtcatgcattgatttcacccaataaaagagtgagtg 576  Q
    |||||||||| |  ||||||||||| |||| | ||||| | ||||||| |||||||||||||||  |   || |||||| | ||||||| |||||||||     
T  27858 cttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagaccca-caatgatttaaaccaataagagagtgagta 27956  T
Q  577 ttagagagagtgatcaaaagagagtgttgctagca 611  Q
    ||| |||||||| ||||||||| ||||||||||||    
T  27957 ttaaagagagtgttcaaaagagggtgttgctagca 27991  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 613
Target Start/End: Complemental strand, 204761 - 204707
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    |||||||||||||||||  |||||||| || |||||| |||||||||||||||||    
T  204761 ccaataaaagagtgagtactagagagaatgttcaaaaaagagtgttgctagcatt 204707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 588
Target Start/End: Complemental strand, 9731 - 9690
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  9731 cattgatttcatccaataaaaaagtgagtgttagagagagtg 9690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 588
Target Start/End: Complemental strand, 11277 - 11236
Alignment:
Q  547 cattgatttcacccaataaaagagtgagtgttagagagagtg 588  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  11277 cattgatttcatccaataaaaaagtgagtgttagagagagtg 11236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 613
Target Start/End: Complemental strand, 296897 - 296837
Alignment:
Q  553 tttcacccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcatt 613  Q
    ||||| ||||||| |||||||||||||||||||||| | |||||| |||||  ||||||||    
T  296897 tttcatccaataagagagtgagtgttagagagagtgttgaaaagaaagtgtccctagcatt 296837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 296974 - 297016
Alignment:
Q  569 agtgagtgttagagagagtgatcaaaagagagtgttgctagca 611  Q
    |||||||||| ||||||||| | ||||||||||||||||||||    
T  296974 agtgagtgtttgagagagtgttgaaaagagagtgttgctagca 297016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 612
Target Start/End: Complemental strand, 26915 - 26862
Alignment:
Q  559 ccaataaaagagtgagtgttagagagagtgatcaaaagagagtgttgctagcat 612  Q
    ||||||||||||||  ||||||||| |||| ||||||  |||||||||||||||    
T  26915 ccaataaaagagtggatgttagagaaagtgctcaaaaacgagtgttgctagcat 26862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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