View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: R108-tnk148-25 (Length: 1006)
Name: R108-tnk148-25
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] R108-tnk148-25 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 439; Significance: 0; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 47 - 545
Target Start/End: Complemental strand, 8523002 - 8522504
Alignment:
| Q |
47 |
tactatgattctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaacaaatttg |
146 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8523002 |
tactatgattctgtgattgtggcgacaaaagggaacaaaatgaaactagtgaaaattccaaacaactttgtaattattgatttgtcaagaaacaaatttg |
8522903 |
T |
|
| Q |
147 |
aaggagagattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatccataggaaa |
246 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8522902 |
aaggcgagattccaaagattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattcccaaatccataggaaa |
8522803 |
T |
|
| Q |
247 |
cttgacatacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtcttggatctt |
346 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
8522802 |
cttgacatacttggaatctttggatctttcctcaaatatgttaaccgatgtgattcctttggaattaaccaatcttaacagtcttgaagtcttggatctt |
8522703 |
T |
|
| Q |
347 |
tccaataatcgtcttgtgggagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgtggattaccct |
446 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8522702 |
tccaataatcgtcttgtgggagaaatacctcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgtggattaccct |
8522603 |
T |
|
| Q |
447 |
tgtcaaaaatgtgtggacctgaacaacattctgcaccttcagccaacaacttttgcggtgaggagaaatttggatttggatggaaaccagtggcaattg |
545 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
8522602 |
tgtcaaaaatgtgtggacctgaacaacattctgcaccttcagccaacaacttttgcagtgaagagaagtttgaatttggatggaaaccagtggcaattg |
8522504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 544 - 999
Target Start/End: Complemental strand, 8523493 - 8523042
Alignment:
| Q |
544 |
tgacaggcaccattccacaatgtcttactaatttatcatccccttgaagttttgggatttacaaatgaacaagtttcatgacactttgccaaggtaactt |
643 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| || |||||||||||| || ||||||||||||| ||||||| ||||||||||| |||||| |
|
|
| T |
8523493 |
tgacaggcaccattccacaatgtcttgctaatttatcatacc-ttgaagttttgg-atctacaaatgaacaaatttcatggaactttgccaag-taactt |
8523397 |
T |
|
| Q |
644 |
ttccaaaagaaagtgcacttaagactccgaatctctatggcaaccaattagaaggtcatattcctaaatccctgtctctctgtaaacggttaatgtttct |
743 |
Q |
| |
|
||| ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| | |
|
|
| T |
8523396 |
ttc-aaaagaaagtgaacttgagactctgaatctctatggcaaccaattagaaggtcatattcctaaatccttgtctctctgtaaagggttgatgttttt |
8523298 |
T |
|
| Q |
744 |
aaatcttgggagcaacaacatagaagacaattttcctcattagcttcaaaccttgcaatatttgaaagtgttgcttttgcgagacaataagttgcatggt |
843 |
Q |
| |
|
||| ||||| | ||||| |||||||||||||||||||||| |||| |||| |||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8523297 |
aaaccttggcaacaacataatagaagacaattttcctcattggcttgaaacactgcattatttgaaagtgttgcttttgcgagacaataagttgcatggt |
8523198 |
T |
|
| Q |
844 |
atcattgttaatccaaagctcaagcatccatttccagatttaactatttttgatatctcaagcaataactttagtggtcctctaccaaaagcctatttca |
943 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
8523197 |
atcattgttaatccaaagatcaagcatccatttccagatttaactatttttgatatctcaaacaataactttagtggtcctctaccaaaatcctatttca |
8523098 |
T |
|
| Q |
944 |
aaaagtttgaagccatgatgaatgttactgagttggaatatatgtggaatagaata |
999 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
8523097 |
aaaagtttgaagccatgatgaatgttactgagttggaatacatgaggaatagaata |
8523042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 53 - 545
Target Start/End: Original strand, 25523231 - 25523726
Alignment:
| Q |
53 |
gattctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaacaaatttgaaggag |
152 |
Q |
| |
|
|||||||||| |||||| |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
25523231 |
gattctgtgactgtggcaacaaaagggattcaaatgaaattggtgaaaattccaataaagtttgtatctattgatttttcaagaaacaaatttgaaggag |
25523330 |
T |
|
| Q |
153 |
agattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatccataggaaacttgac |
252 |
Q |
| |
|
|||||||||| |||||| |||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
25523331 |
agattccaaatgctattggagagcttcatgcactcaaagggcttaacctttcccacaacagacttaccggtcatattcccaaatccataggaaacttgac |
25523430 |
T |
|
| Q |
253 |
atacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtcttggatctttccaat |
352 |
Q |
| |
|
||||||||||| | ||||||||||| |||||||||||||||||||||||| ||||||||| ||| | ||| |||||||||| || ||||||||||| |
|
|
| T |
25523431 |
atacttggaatctctggatctttccctgaatatgttaaccggtgtgattcctgcggaattaaccaatttaaactttcttgaagtcatgaatctttccaat |
25523530 |
T |
|
| Q |
353 |
aatcgtcttgtgggagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgtggattacccttgtcaa |
452 |
Q |
| |
|
|| | | | ||||||| |||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
25523531 |
aaccatttggtgggagaaatacctagaggaaagcaattcaacacatttacaaatgattcctatgaaggaaacttggggttatgtggatttcccttgtcaa |
25523630 |
T |
|
| Q |
453 |
aaatgtgtggacctgaacaacattctgcaccttcagccaac---aacttttgcggtgaggagaaatttggatttggatggaaaccagtggcaattg |
545 |
Q |
| |
|
| | ||||||| ||||||||||||| |||||||| ||||| |||||||| |||| |||||||||||||||||||||| ||| |||| ||||| |
|
|
| T |
25523631 |
agagatgtggacttgaacaacattctccaccttcacccaacaaaaacttttggagtgaagagaaatttggatttggatggataccggtggtaattg |
25523726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 54 - 340
Target Start/End: Complemental strand, 24140722 - 24140436
Alignment:
| Q |
54 |
attctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaacaaatttgaaggaga |
153 |
Q |
| |
|
||||||||| |||||| |||||||||| |||||||| |||||||||||||||||| | ||||||| ||| ||| ||||||||||||||||||||||||| |
|
|
| T |
24140722 |
attctgtgactgtggcaacaaaagggaccaaaatgacactggtgaaaattccaaaaaagtttgtaagtatcgatatgtcaagaaacaaatttgaaggaga |
24140623 |
T |
|
| Q |
154 |
gattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatccataggaaacttgaca |
253 |
Q |
| |
|
||||||||| ||| || |||||||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||| |
|
|
| T |
24140622 |
gattccaaatgctatcggagagcttcatgcactcaaagggattaacctttcccataacagacttactggtcatattccccaatccatcggaaagttgaca |
24140523 |
T |
|
| Q |
254 |
tacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtcttg |
340 |
Q |
| |
|
|||||||||| |||| ||||||| ||||||||||||||||| |||||||||| ||||||||| ||| | ||| |||||||||||||| |
|
|
| T |
24140522 |
tacttggaatctttgaatctttcatcaaatatgttaaccggcgtgattccttcggaattaaccaatatgaacagtcttgaagtcttg |
24140436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 738 - 972
Target Start/End: Original strand, 25522927 - 25523161
Alignment:
| Q |
738 |
gtttctaaatcttgggagcaacaacatagaagacaattttcctcattagcttcaaaccttgcaatatttgaaagtgttgcttttgcgagacaataagttg |
837 |
Q |
| |
|
||||||||| || ||| |||||| ||||||||||||||||| ||| ||||||||| |||| |||||||||||||| ||||||||||||| |||||| |
|
|
| T |
25522927 |
gtttctaaacctcggggtcaacaaaatagaagacaattttccggattggcttcaaacaatgcaggatttgaaagtgttggttttgcgagacaacaagttg |
25523026 |
T |
|
| Q |
838 |
catggtatcattgttaatccaaagctcaagcatccatttccagatttaactatttttgatatctcaagcaataactttagtggtcctctaccaaaagcct |
937 |
Q |
| |
|
|||||| | |||| ||| ||| |||||||| |||||| | ||||| ||||||||||||||| | || || || ||||| |||||||||||||| |
|
|
| T |
25523027 |
catggttcccttgtcaatttaaaaatcaagcattcatttcaaagtttaatcatttttgatatctcaggtaacaatttaggtggttttctaccaaaagcct |
25523126 |
T |
|
| Q |
938 |
atttcaaaaagtttgaagccatgatgaatgttact |
972 |
Q |
| |
|
|||| | ||| | ||||||||||| |||||||||| |
|
|
| T |
25523127 |
atttaagaaattatgaagccatgaagaatgttact |
25523161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 554 - 843
Target Start/End: Complemental strand, 24141206 - 24140921
Alignment:
| Q |
554 |
cattccacaatgtcttactaatttatcatccccttgaagttttgggatttacaaatgaacaagtttcatgacactttgccaaggtaacttttccaaaaga |
653 |
Q |
| |
|
|||||||||||||||| || ||| | |||||| | || |||||| || ||||||| |||| ||||||| |||||||||||| ||||||||| ||| || |
|
|
| T |
24141206 |
cattccacaatgtctttctgattcaccatcccttcga-gttttga-atctacaaatcaacacatttcatggcactttgccaag-taacttttc-aaagga |
24141111 |
T |
|
| Q |
654 |
aagtgcacttaagactccgaatctctatggcaaccaattagaaggtcatattcctaaatccctgtctctctgtaaacggttaatgtttctaaatcttggg |
753 |
Q |
| |
|
| || | || | |||| |||| ||||||| ||| | |||||||| ||| |||| |||||| |||||| |||||| || || |||||| || || |
|
|
| T |
24141110 |
caatggaattgacactctgaatttctatggtaacaagttagaaggccattttccgaaatccttgtctcgatgtaaaaatttggagtatctaaacctcggc |
24141011 |
T |
|
| Q |
754 |
agcaacaacatagaagacaattttcctcattagcttcaaaccttgcaatatttgaaagtgttgcttttgcgagacaataagttgcatggt |
843 |
Q |
| |
|
| |||||| ||||||||||||||| || ||| ||||| ||| ||||||||||| |||| ||| ||||||||||||||||||| |||||| |
|
|
| T |
24141010 |
aacaacaaaatagaagacaatttttctgattggcttctaacactgcaatatttggaagtattggttttgcgagacaataagttacatggt |
24140921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 53 - 545
Target Start/End: Complemental strand, 11118036 - 11117538
Alignment:
| Q |
53 |
gattctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaacaaatttgaaggag |
152 |
Q |
| |
|
|||||||||| ||||| | ||||||||||||||||| ||||||||||||||||| | || |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11118036 |
gattctgtgactgtggaaataaaagggaacaaaatgacactggtgaaaattccaataaagttagtaagtattgatttgtcaagaaacaaatttgaaggag |
11117937 |
T |
|
| Q |
153 |
agattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatccataggaaacttgac |
252 |
Q |
| |
|
||||| |||| |||||| |||||||||||| ||| ||||||||| ||||||| |||||||||||| ||||||||||| || ||||||||||||||| | |
|
|
| T |
11117936 |
agattacaaatgctattggagagcttcatgcactcaaagggcttaatctttcccgtaacagacttactggtcatattcccaactccataggaaacttggc |
11117837 |
T |
|
| Q |
253 |
atacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtcttggatctttccaat |
352 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||| ||| | | |||||||||||| ||| |||| ||| |
|
|
| T |
11117836 |
atacttggaatctttggatctttcatcaaatatgttaaccagtgtgattcctgcagaattaaccaatttgggctttcttgaagtcttagatatttcaaat |
11117737 |
T |
|
| Q |
353 |
aatcgtcttgtgggagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgtggattacccttgtcaa |
452 |
Q |
| |
|
|| | ||| ||||||| |||||| || |||||||||||||||||||||||||||||||| ||||||||||| | | |||||||||||||||||||||| |
|
|
| T |
11117736 |
aaccatctagtgggagaaatacctcaaggaaagcaattcaatacatttacaaatgattcctatgaaggaaattcagggttatgtggattacccttgtcaa |
11117637 |
T |
|
| Q |
453 |
aaatgtgtggacctgaacaacattctgcaccttcagccaacaacttttgc----gg--tgaggagaaatttggatttggatggaaaccagtggcaattg |
545 |
Q |
| |
|
| | ||||||||||||||||||||| |||||||||||||||||| || | || ||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11117636 |
agaaatgtggacctgaacaacattctccaccttcagccaacaactcttcctcttggaatgaagagaaatttggatttggatggaaagcagtggcaattg |
11117538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 603 - 972
Target Start/End: Complemental strand, 11118473 - 11118106
Alignment:
| Q |
603 |
tacaaatgaacaagtttcatgacactttgccaaggtaacttttccaaaagaaagtgcacttaagactccgaatctctatggcaaccaattagaaggtcat |
702 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| || ||||||||| ||| |||||| || | ||| ||| |||||||||||||| |||||||| ||| |
|
|
| T |
11118473 |
tacaaatgaacaaatttcatggcactttgcctag-taacttttc-aaaggaaagtcgtattgtgtctctgaacctctatggcaaccagttagaaggccat |
11118376 |
T |
|
| Q |
703 |
attcctaaatccctgtctctctgtaaacggttaatgtttctaaatcttgggagcaacaacatagaagacaattttcctcattagcttcaaaccttgcaat |
802 |
Q |
| |
|
|||| |||||| |||||| |||||| ||| ||||||||| || || ||||||| |||||||||| ||||||| ||| ||||||||| |||| | |
|
|
| T |
11118375 |
tttccaaaatccttgtctcggtgtaaaaagttggcgtttctaaacctcggcagcaacagaatagaagacagttttcctgattggcttcaaacattgccag |
11118276 |
T |
|
| Q |
803 |
atttgaaagtgttgcttttgcgagacaataagttgcatggtatcattgttaatccaaagctcaagcatccatttccagatttaactatttttgatatctc |
902 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||||||||| ||||| ||| |||| || |||||| ||||||| |||| |||||||||||||| |
|
|
| T |
11118275 |
atttgaaagtattggttttgcgagacaataagttgcatggtcccattgaaaatttaaagatcgagcatctatttccaagcttaatcatttttgatatctc |
11118176 |
T |
|
| Q |
903 |
aagcaataactttagtggtcctctaccaaaagcctatttcaaaaagtttgaagccatgatgaatgttact |
972 |
Q |
| |
|
|||| | |||||||||| |||||||||||||||||| ||||| | |||||| |||| |||||||||| |
|
|
| T |
11118175 |
gggcaacagctttagtggttttctaccaaaagcctatttaaaaaactatgaagctatgaagaatgttact |
11118106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 227; Significance: 1e-124; HSPs: 21)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 47 - 545
Target Start/End: Original strand, 34240757 - 34241255
Alignment:
| Q |
47 |
tactatgattctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaacaaatttg |
146 |
Q |
| |
|
|||||||||||||||| |||| |||||||||| | |||||||| |||| ||||||||||| || ||||||| ||||||||| ||||||||||| ||| |
|
|
| T |
34240757 |
tactatgattctgtgactgtgacgacaaaaggcatcaaaatgacactgacgaaaattccaacaatgtttgtaagtattgatttctcaagaaacaagttta |
34240856 |
T |
|
| Q |
147 |
aaggagagattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatccataggaaa |
246 |
Q |
| |
|
| |||| |||||||| ||| || || ||||| ||| ||| ||||||||||||||| ||||||||||| || |||| |||||| |||||||| ||| |
|
|
| T |
34240857 |
atggaggaattccaaatgatataggagaacttcacgcactcaaagggcttaacctttcacataacagactcactggtcctattcctcaatccatacaaaa |
34240956 |
T |
|
| Q |
247 |
cttgacatacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtcttggatctt |
346 |
Q |
| |
|
||||||| ||||||||| |||||||| || ||||||||| | || ||| |||||||| |||||||| ||| | ||| |||||||||||||||||||| |
|
|
| T |
34240957 |
cttgacaaacttggaatcgttggatctctcgtcaaatatgctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctt |
34241056 |
T |
|
| Q |
347 |
tccaataatcgtcttgtgggagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgtggattaccct |
446 |
Q |
| |
|
|||||||| | ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| |
|
|
| T |
34241057 |
tccaataaccatcttgtgggagaaatacctcaaggaaagcaattcaatacatttacaaatgattcttataaagggaacttggggttatgtggattaccct |
34241156 |
T |
|
| Q |
447 |
tgtcaaaaatgtgtggacctgaacaacattctgcaccttcagccaacaacttttgcggtgaggagaaatttggatttggatggaaaccagtggcaattg |
545 |
Q |
| |
|
||||||| | |||||||| |||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
34241157 |
tgtcaaagaaatgtggaccggaacaacattctccaccttcagccaacaacttttggagtgaagagaaatttggctttggatggaaaccagtggcaattg |
34241255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 49 - 545
Target Start/End: Original strand, 34232986 - 34233482
Alignment:
| Q |
49 |
ctatgattctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaacaaatttgaa |
148 |
Q |
| |
|
|||||||||||||| |||||| | ||||||| ||| |||| | |||| |||||||||| | |||||||| ||||||||| ||||||||||| ||| | |
|
|
| T |
34232986 |
ctatgattctgtgactgtggcaaacaaagggatcaatatgacattggtaaaaattccaataaactttgtaagtattgatttctcaagaaacaagtttaat |
34233085 |
T |
|
| Q |
149 |
ggagagattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatccataggaaact |
248 |
Q |
| |
|
|||| |||||||| ||| || || ||||| ||| ||| ||||||||||||||| ||||||||||| || |||| |||||| |||||||| ||||| |
|
|
| T |
34233086 |
ggaggaattccaaatgatataggagaacttcacgcactcaaagggcttaacctttcacataacagactcactggtcctattcctcaatccatacaaaact |
34233185 |
T |
|
| Q |
249 |
tgacatacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtcttggatctttc |
348 |
Q |
| |
|
||||| ||||||||| |||||||| || ||||||||| | || ||| |||||||| |||||||| ||| | ||| |||||||||||||||||||||| |
|
|
| T |
34233186 |
tgacaaacttggaatcgttggatctctcgtcaaatatgctcactggtatgattcctgcagaattaaccaatttgaacagtcttgaagtcttggatctttc |
34233285 |
T |
|
| Q |
349 |
caataatcgtcttgtgggagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgtggattacccttg |
448 |
Q |
| |
|
|||||| | ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| |
|
|
| T |
34233286 |
caataaccatcttgtgggagaaatacctcaaggaaagcaattcaatacatttacaaatgattcttataaagggaacttggggttatgtggattacccttg |
34233385 |
T |
|
| Q |
449 |
tcaaaaatgtgtggacctgaacaacattctgcaccttcagccaacaacttttgcggtgaggagaaatttggatttggatggaaaccagtggcaattg |
545 |
Q |
| |
|
||||| | |||||||| |||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
34233386 |
tcaaagaaatgtggaccggaacaacattctccaccttcagccaacaacttttggagtgaagagaaatttggctttggatggaaaccagtggcaattg |
34233482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 47 - 545
Target Start/End: Complemental strand, 42117631 - 42117130
Alignment:
| Q |
47 |
tactatgattctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaacaaatttg |
146 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
42117631 |
tactatgattctgtgattgtgtcgacaaaagggagcaaaatgacattggtgaaaattccaaacatttttgtaattattgatttgtcaaaaaacaaatttg |
42117532 |
T |
|
| Q |
147 |
aaggagagattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatccataggaaa |
246 |
Q |
| |
|
| |||||||||||||| |||||| || || |||||| ||| ||||||||||||||||||||||||||| || ||||||||||| |||||||| ||||| |
|
|
| T |
42117531 |
agggagagattccaaatgctattggagacctccatgcactcaaagggcttaacctttcccataacagactcaccggtcatattcccaaatccatgggaaa |
42117432 |
T |
|
| Q |
247 |
cttgacatacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtcttggatctt |
346 |
Q |
| |
|
|||| || ||||||||| |||||||| || ||||||||| | |||||| |||| ||| |||||||| ||| | || |||| |||||||| ||||| |
|
|
| T |
42117431 |
cttgtcaaacttggaatcattggatctctcgtcaaatatgcttaccggtatgatccctgcagaattaaccaatttagactttcttcaagtcttgaatctt |
42117332 |
T |
|
| Q |
347 |
tccaataatcgtcttgtgggagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgtggattaccct |
446 |
Q |
| |
|
|||||||| | ||| |||||| |||||| || | ||| ||| |||||||| |||||||||| || |||||||||||| |||||||||||| || | |
|
|
| T |
42117331 |
tccaataaccatctagtgggaaaaatacctcaagagccgcacttcgatacatttccaaatgattcctacaaaggaaacttgggtttatgtggatttccgt |
42117232 |
T |
|
| Q |
447 |
tgtcaaaaatgtgtggacctgaacaacattctgcaccttcagccaacaa---cttttgcggtgaggagaaatttggatttggatggaaaccagtggcaat |
543 |
Q |
| |
|
||||||| || |||||||||||||| |||||| || |||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
42117231 |
tgtcaaagatttgtggacctgaacatcattctccaatttcagccaacaacagcttttgcagtgaagagaaatttggatttggatggaaagcagtggcaat |
42117132 |
T |
|
| Q |
544 |
tg |
545 |
Q |
| |
|
|| |
|
|
| T |
42117131 |
tg |
42117130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 41 - 545
Target Start/End: Complemental strand, 42123385 - 42122881
Alignment:
| Q |
41 |
gcaccctactatgattctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaaca |
140 |
Q |
| |
|
|||| ||||| ||||||||||| ||||| |||||||| | |||||||| ||| || ||||||||||| | ||||||| ||||||| |||||||||||| |
|
|
| T |
42123385 |
gcacactactctgattctgtgaccgtggcaacaaaaggaaccaaaatgacactcgttaaaattccaaaaaagtttgtaagtattgatatgtcaagaaaca |
42123286 |
T |
|
| Q |
141 |
aatttgaaggagagattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatccat |
240 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||||||||||||||||| | |||| |||||| |||| || |
|
|
| T |
42123285 |
aatttgaaggagagattccaaatgctattggaaagctacatgcactcatagggcttaacctttcccataacagactcaatggtcctattccccaatcaat |
42123186 |
T |
|
| Q |
241 |
aggaaacttgacatacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtcttg |
340 |
Q |
| |
|
||| ||||| || ||||||||| |||||||| || ||||||||| | || | |||||||||| ||| |||| ||| | | |||||||||||| |
|
|
| T |
42123185 |
tggatacttgtcaaacttggaatggttggatctctcatcaaatatgctcactgatgtgattcctgcagaactaaccaatttgggctttcttgaagtctta |
42123086 |
T |
|
| Q |
341 |
gatctttccaataatcgtcttgtgggagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgtggat |
440 |
Q |
| |
|
||| |||| ||||| | ||||||||||| |||||| || |||||||| ||||||||||||||||||||||| ||||||||||| | | |||||||||| |
|
|
| T |
42123085 |
gatatttcaaataaccatcttgtgggagaaatacctcaaggaaagcagttcaatacatttacaaatgattcctatgaaggaaattcagggttatgtggat |
42122986 |
T |
|
| Q |
441 |
tacccttgtcaaaaatgtgtggacctgaacaacattctgcaccttcagccaacaacttttgcggtgaggagaaatttggatttggatggaaaccagtggc |
540 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| ||| |||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
42122985 |
tacccttgtcaaaaaaatgtggacctgaacaacattctccaccttcagccaagaactcttggagtgaagagaaatttagatttggatggaaaccagtggc |
42122886 |
T |
|
| Q |
541 |
aattg |
545 |
Q |
| |
|
|||| |
|
|
| T |
42122885 |
gattg |
42122881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 47 - 545
Target Start/End: Complemental strand, 42128773 - 42128276
Alignment:
| Q |
47 |
tactatgattctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaacaaatttg |
146 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42128773 |
tactatgattctatgattgtggcgacaaaagggaacaaaaggacattggtgaaaattccaaatatctttgtaattattgatttgtcaagaaacaaatttg |
42128674 |
T |
|
| Q |
147 |
aaggagagattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatccataggaaa |
246 |
Q |
| |
|
||||||| |||||||| | ||||||||||||||||| | ||||| || |||||||||||||||| ||| | || | |||||| |||||||| ||||| |
|
|
| T |
42128673 |
aaggagatattccaaatgattttggtgagcttcatgcactaataggactcaacctttcccataacaaactcattggccctattccaaaatccatgggaaa |
42128574 |
T |
|
| Q |
247 |
cttgacatacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtcttggatctt |
346 |
Q |
| |
|
||||||| ||||||||| |||||||| || |||||| || | || | |||||||||| ||||||| ||| | |||||||||||| |||||| |
|
|
| T |
42128573 |
cttgacaaacttggaatggttggatctctcatcaaatgtgctcactgatgtgattcctgcagaattaagcaatttgggttttcttgaagtcttagatctt |
42128474 |
T |
|
| Q |
347 |
tccaataatcgtcttgtgggagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgtggattaccct |
446 |
Q |
| |
|
|| ||||| | ||| ||||||| |||||| || ||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |
|
|
| T |
42128473 |
tcaaataaccatctagtgggagaaatacctcaaggaccgcaattcaatacatttacaaatgattcctatgaaggaaacttggggttatgtggatttccct |
42128374 |
T |
|
| Q |
447 |
tgtcaaaaatgtgtggacctgaacaacattctgcacct-tcagccaacaacttttgcggtgaggagaaatttggatttggatggaaaccagtggcaattg |
545 |
Q |
| |
|
||||||| | |||||||||||||| |||| || | | | |||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
42128373 |
tgtcaaagaattgtggacctgaaca--attccacaattctttgacaacaactcttggagtgaagagaaatttagatttggatggaaaccagtggcgattg |
42128276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 673 - 983
Target Start/End: Complemental strand, 42129145 - 42128835
Alignment:
| Q |
673 |
aatctctatggcaaccaattagaaggtcatattcctaaatccctgtctctctgtaaacggttaatgtttctaaatcttgggagcaacaacatagaagaca |
772 |
Q |
| |
|
|||||| |||||||| |||||||||||||| |||| |||||| |||||||||||| | ||| ||||||||| || || ||||||||||||||||||| |
|
|
| T |
42129145 |
aatctccatggcaacaaattagaaggtcattttccaaaatccttgtctctctgtacaaagttggagtttctaaacctcggaagcaacaacatagaagaca |
42129046 |
T |
|
| Q |
773 |
attttcctcattagcttcaaaccttgcaatatttgaaagtgttgcttttgcgagacaataagttgcatggtatcattgttaatccaaagctcaagcatcc |
872 |
Q |
| |
|
|||||||| ||| ||||||||| |||||||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||| |||| |||||||||| |
|
|
| T |
42129045 |
attttcctgattggcttcaaacactgcaatatttgaaagtgttggttttgcaagacaacaagttgcatggtatcattgctaatctaaagatcaagcatcc |
42128946 |
T |
|
| Q |
873 |
atttccagatttaactatttttgatatctcaagcaataactttagtggtcctctaccaaaagcctatttcaaaaagtttgaagccatgatgaatgttact |
972 |
Q |
| |
|
||||||| ||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
42128945 |
atttccaagtttaattatttttgatatctcaggcaataactttagcggtccgctaccaaaagcctattttaaaaagtttgaagccatgaagaatgttact |
42128846 |
T |
|
| Q |
973 |
gagttggaata |
983 |
Q |
| |
|
| |||||||| |
|
|
| T |
42128845 |
caattggaata |
42128835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 137 - 545
Target Start/End: Original strand, 41572300 - 41572708
Alignment:
| Q |
137 |
aacaaatttgaaggagagattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaat |
236 |
Q |
| |
|
||||| |||||||||||||||| || ||||||| |||||||| || ||| ||||||||||||||||||||||||||| || |||| |||||| ||| |
|
|
| T |
41572300 |
aacaattttgaaggagagattctgaatgttattggggagcttcactcactcaaagggcttaacctttcccataacagactcaccggtcctattcctcaat |
41572399 |
T |
|
| Q |
237 |
ccataggaaacttgacatacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagt |
336 |
Q |
| |
|
|| ||||||||||| || || |||||| ||||||||||| |||||||| | || ||||| ||||||| ||||||| ||||| |||||| ||| ||| |
|
|
| T |
41572400 |
ccgtaggaaacttgtcaaacatggaatcattggatctttcgtcaaatatactcactggtgtaattccttcagaattaatcaatctgaacggtattggagt |
41572499 |
T |
|
| Q |
337 |
cttggatctttccaataatcgtcttgtgggagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgt |
436 |
Q |
| |
|
||| ||||||| |||| | ||| ||||||| |||||| || ||||| || |||||||||||| | ||||| || |||||||||||||||| ||||| |
|
|
| T |
41572500 |
attgaatctttctcataaccatctagtgggagaaatacctcaaggaaaacagttcaatacattttccaatgactcatatgaaggaaacttgggattatgc |
41572599 |
T |
|
| Q |
437 |
ggattacccttgtcaaaaatgtgtggacctgaacaacattctgcaccttcagccaacaacttttgcggtgaggagaaatttggatttggatggaaaccag |
536 |
Q |
| |
|
||||| ||||||||||| | |||| |||||||||||||||| | | | || |||||||| |||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
41572600 |
ggatttcccttgtcaaagaaatgtgaacctgaacaacattctccgcttccacccaacaacctttggagtgaagagaaatttggatttggatggaaaccag |
41572699 |
T |
|
| Q |
537 |
tggcaattg |
545 |
Q |
| |
|
|||| |||| |
|
|
| T |
41572700 |
tggctattg |
41572708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 137 - 545
Target Start/End: Original strand, 41617939 - 41618347
Alignment:
| Q |
137 |
aacaaatttgaaggagagattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaat |
236 |
Q |
| |
|
||||| |||||||||||||||| || ||||||| |||||||| || ||| ||||||||||||||||||||||||||| || |||| |||||| ||| |
|
|
| T |
41617939 |
aacaattttgaaggagagattctgaatgttattggggagcttcactcactcaaagggcttaacctttcccataacagactcaccggtcctattcctcaat |
41618038 |
T |
|
| Q |
237 |
ccataggaaacttgacatacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagt |
336 |
Q |
| |
|
|| ||||||||||| || || |||||| ||||||||||| |||||||| | || ||||| ||||||| ||||||| ||||| |||||| ||| ||| |
|
|
| T |
41618039 |
ccgtaggaaacttgtcaaacatggaatcattggatctttcgtcaaatatactcactggtgtaattccttcagaattaatcaatctgaacggtattggagt |
41618138 |
T |
|
| Q |
337 |
cttggatctttccaataatcgtcttgtgggagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgt |
436 |
Q |
| |
|
||| ||||||| |||| | ||| ||||||| |||||| || ||||| || |||||||||||| | ||||| || |||||||||||||||| ||||| |
|
|
| T |
41618139 |
attgaatctttctcataaccatctagtgggagaaatacctcaaggaaaacagttcaatacattttccaatgactcatatgaaggaaacttgggattatgc |
41618238 |
T |
|
| Q |
437 |
ggattacccttgtcaaaaatgtgtggacctgaacaacattctgcaccttcagccaacaacttttgcggtgaggagaaatttggatttggatggaaaccag |
536 |
Q |
| |
|
||||| ||||||||||| | |||| |||||||||||||||| | | | || |||||||| |||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
41618239 |
ggatttcccttgtcaaagaaatgtgaacctgaacaacattctccgcttccacccaacaacctttggagtgaagagaaatttggatttggatggaaaccag |
41618338 |
T |
|
| Q |
537 |
tggcaattg |
545 |
Q |
| |
|
|||| |||| |
|
|
| T |
41618339 |
tggctattg |
41618347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 66 - 450
Target Start/End: Original strand, 41713768 - 41714152
Alignment:
| Q |
66 |
tggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaacaaatttgaaggagagattccaaacat |
165 |
Q |
| |
|
||||||||||||| ||||||| ||| |||||||||||||| ||||||| || ||||||||| |||||||| |||||||| || ||||||||| | | |
|
|
| T |
41713768 |
tggcgacaaaaggaaacaaaaccccacttgtgaaaattccaaaaatctttgcaagtattgatttttcaagaaataaatttgatggggagattccagatgt |
41713867 |
T |
|
| Q |
166 |
tattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatccataggaaacttgacatacttggaattt |
265 |
Q |
| |
|
|||||| |||||||||| ||| ||||||||||||||| |||||| ||| || ||||| ||||| ||||||| |||||||||| | ||||||||| |
|
|
| T |
41713868 |
tattggagagcttcatgatctcaaagggcttaacctttcatataacaaactcactggtcacattccccaatccatgggaaacttgataaacttggaatca |
41713967 |
T |
|
| Q |
266 |
ttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtcttggatctttccaataatcgtcttgtgg |
365 |
Q |
| |
|
|||||||| || ||||||||| | || ||| ||||||| | | ||||| ||| | || ||||||||||||||||||||| ||||| | |||||||| |
|
|
| T |
41713968 |
ttggatctctcgtcaaatatgctcactggtcggattcctgtaaagttaaccaatttggactttcttgaagtcttggatctttctaataaccatcttgtgg |
41714067 |
T |
|
| Q |
366 |
gagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgtggattacccttgtc |
450 |
Q |
| |
|
||| |||||| || |||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
41714068 |
gagaaatacctcaaggaaagcagttcaatacatttacaaatgattcctatgaaggaaacttggggttatgtggatttcccttgtc |
41714152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 540 - 983
Target Start/End: Complemental strand, 42118152 - 42117714
Alignment:
| Q |
540 |
caattgacaggcaccattccacaatgtcttactaatttatcatccccttgaagttttgggatttacaaatgaacaagtttcatgacactttgccaaggta |
639 |
Q |
| |
|
|||||||||| || |||||||||||||||| |||||| |||| || || ||||||||| |||| |||||||| | ||| ||| ||||||||||| || |
|
|
| T |
42118152 |
caattgacagacatcattccacaatgtcttgctaattcatcaatcc-ttcaagttttgg-atttgcaaatgaatagattttatggaactttgccaag-ta |
42118056 |
T |
|
| Q |
640 |
acttttccaaaagaaagtgcacttaagactccgaatctctatggcaaccaattagaaggtcatattcctaaatccctgtctctctgtaaacggttaatgt |
739 |
Q |
| |
|
||||||| | | || ||| ||| |||||| |||||| |||||||||||||||||||||| ||||||||||| | |||| |||||| | | || |
|
|
| T |
42118055 |
acttttc-agaggactgtgtgcttcagactctaaatctccatggcaaccaattagaaggtcagattcctaaatctttctctcattgtaaaaacctga-gt |
42117958 |
T |
|
| Q |
740 |
ttctaaatcttgggagcaacaacatagaagacaattttcctcattagcttcaaaccttgcaatatttgaaagtgttgcttttgcgagacaataagttgca |
839 |
Q |
| |
|
|| |||| ||||| |||||||| ||| |||| | ||||| | ||||||||| | ||||||||| |||||||| |||| | ||||||||||||||| |
|
|
| T |
42117957 |
ttttaaaccttggcagcaacaaaataaaagaaagatttcccgtctggcttcaaacactacaatatttgcaagtgttggttttacaagacaataagttgca |
42117858 |
T |
|
| Q |
840 |
tggtatcattgttaatccaaagctcaagcatccatttccagatttaactatttttgatatctcaagcaataactttagtggtcctctaccaaaagcctat |
939 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||| ||||| ||||||| |||||||| | ||||||||||| |||| ||||||||||| | | |
|
|
| T |
42117857 |
tggtatcattcctaatccaaagatcaagcatccatttccaagtttaattattttttatatctcaggaaataactttagctgtccgctaccaaaagcattt |
42117758 |
T |
|
| Q |
940 |
ttcaaaaagtttgaagccatgatgaatgttactgagttggaata |
983 |
Q |
| |
|
|| ||||| ||||||||||||| ||| |||||||| |||||||| |
|
|
| T |
42117757 |
ttaaaaaaatttgaagccatgaagaaagttactgaattggaata |
42117714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 740 - 972
Target Start/End: Original strand, 34240443 - 34240675
Alignment:
| Q |
740 |
ttctaaatcttgggagcaacaacatagaagacaattttcctcattagcttcaaaccttgcaatatttgaaagtgttgcttttgcgagacaataagttgca |
839 |
Q |
| |
|
||||||||||| | | |||||| || |||||||| |||||| | ||||||||| | ||||| ||||||||| || |||||||||||||||||||||| |
|
|
| T |
34240443 |
ttctaaatcttcgcaacaacaaaatggaagacaaatttcctgtctggcttcaaactctccaatacttgaaagtgctggttttgcgagacaataagttgca |
34240542 |
T |
|
| Q |
840 |
tggtatcattgttaatccaaagctcaagcatccatttccagatttaactatttttgatatctcaagcaataactttagtggtcctctaccaaaagcctat |
939 |
Q |
| |
|
|||| ||||| ||| |||| ||| |||||||||||| |||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
34240543 |
tggtcacattgccaatttaaagatcaggcatccatttcctagtttagttatttttgatatctcaagcaataactttactggtccgctaccaaaagcctat |
34240642 |
T |
|
| Q |
940 |
ttcaaaaagtttgaagccatgatgaatgttact |
972 |
Q |
| |
|
|| ||| | ||||||||||||| ||| |||||| |
|
|
| T |
34240643 |
ttaaaatattttgaagccatgaagaaagttact |
34240675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 672 - 961
Target Start/End: Original strand, 34232632 - 34232924
Alignment:
| Q |
672 |
gaatctctatggcaaccaattagaaggtcatattcctaaatccctgtctctctgtaaacggttaatgtttctaaatcttgggagcaacaacatagaagac |
771 |
Q |
| |
|
||||||| |||||||||| ||||||||||| | |||||||| |||| | ||||||| | | ||||||||| || || |||||||| ||||||||| |
|
|
| T |
34232632 |
gaatctcaatggcaaccatatagaaggtcatttgcctaaatctttgtcccactgtaaaacgctggagtttctaaacctcggcagcaacaaaatagaagac |
34232731 |
T |
|
| Q |
772 |
aattttcctcattagcttcaaaccttgcaatatttgaaagtgttgcttttgcgagacaataagttgcatggtatcattgttaatccaaagctcaagcatc |
871 |
Q |
| |
|
|| |||||| | | | ||||||| |||||| ||||||||||| | |||| ||||| ||||||||||||||| ||||| ||| |||| ||||| ||| |
|
|
| T |
34232732 |
aaatttcctgactggattcaaactttgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatc |
34232831 |
T |
|
| Q |
872 |
catttccagatttaactatttttgatatctcaagcaataactttagtggtcctctacca---aaagcctatttcaaaaagtttgaagccatga |
961 |
Q |
| |
|
||||||| |||| ||||||||||||||| | ||||||||||||||||| |||||| |||| |||||||||||||| ||||||||||| |
|
|
| T |
34232832 |
catttcccagtttagttatttttgatatctcgggaaataactttagtggtccgctaccaccgaaagactatttcaaaaagtatgaagccatga |
34232924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 667 - 972
Target Start/End: Complemental strand, 42123766 - 42123461
Alignment:
| Q |
667 |
actccgaatctctatggcaaccaattagaaggtcatattcctaaatccctgtctctctgtaaacggttaatgtttctaaatcttgggagcaacaacatag |
766 |
Q |
| |
|
|||| ||| ||||| |||||||| |||||||| ||| |||| |||||| |||||| ||||||| |||| ||||||||| || || |||||||| |||| |
|
|
| T |
42123766 |
actctgaacctctacggcaaccagttagaaggccattttccaaaatccttgtctcgctgtaaagagttagagtttctaaacctcggtagcaacaaaatag |
42123667 |
T |
|
| Q |
767 |
aagacaattttcctcattagcttcaaaccttgcaatatttgaaagtgttgcttttgcgagacaataagttgcatggtatcattgttaatccaaagctcaa |
866 |
Q |
| |
|
|||||||||||||| ||| | ||||||| | ||| |||||||||| || ||||||||||||||||||| |||||| ||| | ||| |||| | | |
|
|
| T |
42123666 |
aagacaattttcctgattggtttcaaacacttcaagatttgaaagtactggttttgcgagacaataagtttcatggtcccatcgccaatttaaagattga |
42123567 |
T |
|
| Q |
867 |
gcatccatttccagatttaactatttttgatatctcaagcaataactttagtggtcctctaccaaaagcctatttcaaaaagtttgaagccatgatgaat |
966 |
Q |
| |
|
|| || ||||||| |||| |||||||||||||| | ||||||||| ||||| ||||||||||||||||| ||||| | ||||||||||| |||| |
|
|
| T |
42123566 |
gcgtctatttccaagcttaatcatttttgatatctctggaaataactttggtggttttctaccaaaagcctattcaaaaaattatgaagccatgaagaat |
42123467 |
T |
|
| Q |
967 |
gttact |
972 |
Q |
| |
|
| |||| |
|
|
| T |
42123466 |
gatact |
42123461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 41444181 - 41444084
Alignment:
| Q |
110 |
atctttgtaattattgatttgtcaagaaacaaatttgaaggagagattccaaacattattggtgagcttcatgcaatcatagggcttaacctttccca |
207 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
41444181 |
atctttgtaagtattgatttttcaggaaacaaatttgaaggagacattccaaatgttattggtgagcttcatgcaatcataggactcaacctttccca |
41444084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 541 - 698
Target Start/End: Original strand, 41713260 - 41713413
Alignment:
| Q |
541 |
aattgacaggcaccattccacaatgtcttactaatttatcatccccttgaagttttgggatttacaaatgaacaagtttcatgacactttgccaaggtaa |
640 |
Q |
| |
|
||||||| || |||||||||||||||||| |||||||||||| |||||||||||| |||| ||||||||||||| ||| ||| ||||||||||| |||| |
|
|
| T |
41713260 |
aattgactggtaccattccacaatgtcttgctaatttatcat-accttgaagtttt-ggatctacaaatgaacaaattttatggcactttgccaa-gtaa |
41713356 |
T |
|
| Q |
641 |
cttttccaaaagaaagtgcacttaagactccgaatctctatggcaaccaattagaagg |
698 |
Q |
| |
|
||||| |||| || |||| ||| | |||| ||||||||||||||| |||||||||| |
|
|
| T |
41713357 |
ctttt-caaaggacagtgagcttcatactctaaatctctatggcaacaaattagaagg |
41713413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 541 - 646
Target Start/End: Original strand, 41571722 - 41571824
Alignment:
| Q |
541 |
aattgacaggcaccattccacaatgtcttactaatttatcatccccttgaagttttgggatttacaaatgaacaagtttcatgacactttgccaaggtaa |
640 |
Q |
| |
|
|||||||||||||||||||||| |||||| | || ||||||| ||||| ||||||| |||||||||||||||||| ||| ||| |||||| |||| |||| |
|
|
| T |
41571722 |
aattgacaggcaccattccacattgtcttgcaaacttatcat-cccttcaagtttt-ggatttacaaatgaacaaattttatggcactttaccaa-gtaa |
41571818 |
T |
|
| Q |
641 |
cttttc |
646 |
Q |
| |
|
|||||| |
|
|
| T |
41571819 |
cttttc |
41571824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 893 - 974
Target Start/End: Original strand, 41713612 - 41713693
Alignment:
| Q |
893 |
ttgatatctcaagcaataactttagtggtcctctaccaaaagcctatttcaaaaagtttgaagccatgatgaatgttactga |
974 |
Q |
| |
|
|||||||||| ||||| |||| |||||||| ||||||||||||||||| ||||| | | || |||||| |||||||||||| |
|
|
| T |
41713612 |
ttgatatctcgggcaatgacttcagtggtccgctaccaaaagcctatttaaaaaattatcaaaccatgaagaatgttactga |
41713693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 863 - 938
Target Start/End: Original strand, 41572040 - 41572115
Alignment:
| Q |
863 |
tcaagcatccatttccagatttaactatttttgatatctcaagcaataactttagtggtcctctaccaaaagccta |
938 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||| ||| ||||||||| ||||| || |||||||||||||| |
|
|
| T |
41572040 |
tcaagcatccatttcctagtttaattatttttgatatttcatccaataacttcagtggcccactaccaaaagccta |
41572115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 863 - 938
Target Start/End: Original strand, 41617679 - 41617754
Alignment:
| Q |
863 |
tcaagcatccatttccagatttaactatttttgatatctcaagcaataactttagtggtcctctaccaaaagccta |
938 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||| ||| ||||||||| ||||| || |||||||||||||| |
|
|
| T |
41617679 |
tcaagcatccatttcctagtttaattatttttgatatttcatccaataacttcagtggcccactaccaaaagccta |
41617754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 509 - 545
Target Start/End: Original strand, 41714176 - 41714212
Alignment:
| Q |
509 |
gagaaatttggatttggatggaaaccagtggcaattg |
545 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |
|
|
| T |
41714176 |
gagaaatttggatttggatggaaagcagtggcaattg |
41714212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 633
Target Start/End: Original strand, 34240261 - 34240338
Alignment:
| Q |
554 |
cattccacaatgtcttactaatttatcatccccttgaagttttgggatttacaaatgaacaagtttcatgacactttgcc |
633 |
Q |
| |
|
|||||||||||||||| |||||||| ||| ||||| || |||| |||| ||||||||||||| ||| ||| ||||||||| |
|
|
| T |
34240261 |
cattccacaatgtcttgctaatttaccat-cccttcaaatttt-ggatctacaaatgaacaacttttatggcactttgcc |
34240338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 540 - 979
Target Start/End: Complemental strand, 12248851 - 12248416
Alignment:
| Q |
540 |
caattgacaggcaccattccacaatgtcttactaatttatcatccccttgaagttttgggatttacaaatgaacaagtttcatgacactttgccaaggta |
639 |
Q |
| |
|
||||||||||| | |||||||||||||||| || |||||||||||| || |||||||| || ||||||||||||| ||||||| |||||||||||| || |
|
|
| T |
12248851 |
caattgacaggtatcattccacaatgtcttgctgatttatcatccc-ttcaagttttga-atctacaaatgaacaaatttcatggcactttgccaag-ta |
12248755 |
T |
|
| Q |
640 |
acttttccaaaagaa-agtgcacttaagactccgaatctctatggcaaccaattagaaggtcatattcctaaatccctgtctctctgtaaacggttaatg |
738 |
Q |
| |
|
|||| || ||||| ||||||||| |||||| |||||| |||||||||||||||||||| |||||||||| |||| |||||||||||||| |||| | | |
|
|
| T |
12248754 |
acttctc--aaagatgagtgcacttgagactctgaatctttatggcaaccaattagaaggccatattcctagatccttgtctctctgtaaagggttgaag |
12248657 |
T |
|
| Q |
739 |
tttctaaatcttgggagcaacaacatagaagacaattttcctcattagcttcaaaccttgcaatatttgaaagtgttgcttttgcgagacaataagttgc |
838 |
Q |
| |
|
|||||||| || || |||||||| ||||||||| | |||||| ||| ||||||||| ||||| |||||||||| ||||| |||||||||||||||||| |
|
|
| T |
12248656 |
tttctaaacctcggcagcaacaaaatagaagacgagtttcctgattggcttcaaacactgcaagatttgaaagttttgctgctgcgagacaataagttgc |
12248557 |
T |
|
| Q |
839 |
atggtatcattgttaatccaaagctcaagcatccatttccagatttaactatttttgatatctcaagcaataactttagtggtcctctaccaaaagccta |
938 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| |
|
|
| T |
12248556 |
atggtatcattgttaatctaaatacaaagcatccatttccaagtttaactatttttgatatctcaggcaataactttagtggtccgctaccaaatgccta |
12248457 |
T |
|
| Q |
939 |
tttcaaaaagtttgaagccatgatgaatgttactgagttgg |
979 |
Q |
| |
|
||| |||||||||||||||||| ||||||| |||| |||| |
|
|
| T |
12248456 |
ttttgaaaagtttgaagccatgaagaatgttgctgaattgg |
12248416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 40 - 545
Target Start/End: Original strand, 11994584 - 11995093
Alignment:
| Q |
40 |
tgcaccctactatgattctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaac |
139 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11994584 |
tgcaccctactatgattctgtgattgtggcgtcaaaagggaacaaaatgacatgggttaaaattccaaacatcttagtaattattgatttgtcaagaaac |
11994683 |
T |
|
| Q |
140 |
aaatttgaaggagagattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatcca |
239 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||| ||| | ||||||||||||||||||||||||||||| | |||| |||||| ||||||| |
|
|
| T |
11994684 |
aaatttgaaggagagattccaaatgttattgatgagcttcaagcacttatagggcttaacctttcccataacagactcattggtcctattcccaaatcca |
11994783 |
T |
|
| Q |
240 |
taggaaacttgacatacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtctt |
339 |
Q |
| |
|
| |||||||||||| ||||||||| ||||||| || ||||||||| | || | ||||||||| ||||||| ||| | | ||||| ||| || |
|
|
| T |
11994784 |
tgggaaacttgacaaacttggaatggctggatctctcatcaaatatgctcactgatgtgattccagcaaaattaaccaatttgggctttcttgcagtttt |
11994883 |
T |
|
| Q |
340 |
ggatctttccaataatcgtcttgtgggagtaataccgcagggaaagcaatt-caatacatttacaaatgattcttatgaaggaaacttggatttatgtgg |
438 |
Q |
| |
|
|| |||||||||| | ||| ||||||| |||||| | ||||| || || | | |||||| |||||||||| |||| |||||||||||| ||||||| |
|
|
| T |
11994884 |
agacttttccaataaccatctagtgggagaaatacctcgaggaaaacagttccgagacattttcaaatgattcatatgtaggaaacttggagttatgtga |
11994983 |
T |
|
| Q |
439 |
attacccttgtcaaaaatgtgtggacctgaacaacattctgcaccttcagccaacaa---cttttgcggtgaggagaaatttggatttggatggaaacca |
535 |
Q |
| |
|
||| ||||||||||| | ||| ||||||||||||| |||| |||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
11994984 |
atttcccttgtcaaagaagtgcggacctgaacaacgttctccaccttcacccaacaacagcttttcgagtgaagagaaatttggatttggatggaaacca |
11995083 |
T |
|
| Q |
536 |
gtggcaattg |
545 |
Q |
| |
|
|||||||||| |
|
|
| T |
11995084 |
gtggcaattg |
11995093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 40 - 545
Target Start/End: Complemental strand, 12248345 - 12247837
Alignment:
| Q |
40 |
tgcaccctactatgattctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaac |
139 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12248345 |
tgcaccctactatgattctgtgattgtggcatcaaaagggaacaaaatgacatgggttaaaattccaaacatcttagtaattattgatttgtcaagaaac |
12248246 |
T |
|
| Q |
140 |
aaatttgaaggagagattccaaacattattggtgagcttcatgcaatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatcca |
239 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||| ||| | ||||||||||||||||||||||||||||| | |||| |||||| ||||||| |
|
|
| T |
12248245 |
aaatttgaaggagagattccaaatgttattgatgagcttcaagcacttatagggcttaacctttcccataacagactcattggtcctattcccaaatcca |
12248146 |
T |
|
| Q |
240 |
taggaaacttgacatacttggaatttttggatctttcctcaaatatgttaaccggtgtgattcctttggaattaactaatcttaacggtcttgaagtctt |
339 |
Q |
| |
|
| |||||||||||| ||||||||| ||||||| || ||||||||| | || | ||||||||| ||||||| ||| | | ||||| ||| || |
|
|
| T |
12248145 |
tgggaaacttgacaaacttggaatggctggatctctcatcaaatatgctcactgatgtgattccagcaaaattaaccaatttgggctttcttgcagtttt |
12248046 |
T |
|
| Q |
340 |
ggatctttccaataatcgtcttgtgggagtaataccgcagggaaagcaattcaatacatttacaaatgattcttatgaaggaaacttggatttatgtgga |
439 |
Q |
| |
|
|| |||||||||| | ||| ||||||| |||||| | ||||| || ||| | |||||| |||||||||| |||| |||||||||||| ||||||||| |
|
|
| T |
12248045 |
agacttttccaataaccatctagtgggagaaatacctcgaggaaaacagttcgagacattttcaaatgattcatatgtaggaaacttggagttatgtgga |
12247946 |
T |
|
| Q |
440 |
ttacccttgtcaaaaatgtgtggacctgaacaacattctgcaccttca---gccaacaacttttgcggtgaggagaaatttggatttggatggaaaccag |
536 |
Q |
| |
|
|| ||||||||||| | |||||||||||||||| ||||| ||||||| ||||| |||||| | || | |||||||||||||||||||||||| | |
|
|
| T |
12247945 |
tttcccttgtcaaagaagtgtggacctgaacaatattctcaaccttcacttaacaacagcttttggagcgacgcgaaatttggatttggatggaaaccgg |
12247846 |
T |
|
| Q |
537 |
tggcaattg |
545 |
Q |
| |
|
||||||||| |
|
|
| T |
12247845 |
tggcaattg |
12247837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 172; E-Value: 7e-92
Query Start/End: Original strand, 603 - 994
Target Start/End: Original strand, 11994139 - 11994528
Alignment:
| Q |
603 |
tacaaatgaacaagtttcatgacactttgccaaggtaacttttccaaaagaaagtgcacttaagactccgaatctctatggcaaccaattagaaggtcat |
702 |
Q |
| |
|
|||||||||||| | ||||| |||||||||||| |||||| || ||| || ||||||||| |||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
11994139 |
tacaaatgaacacatgtcatggcactttgccaag-taacttctc-aaaggagagtgcacttgagactctgaatctctatggcaaccaattagaaggccat |
11994236 |
T |
|
| Q |
703 |
attcctaaatccctgtctctctgtaaacggttaatgtttctaaatcttgggagcaacaacatagaagacaattttcctcattagcttcaaaccttgcaat |
802 |
Q |
| |
|
||||||| |||| | ||||||||||| |||| | ||||||||| || || |||||||| ||||||||| | |||||| ||| ||||||||| ||||| |
|
|
| T |
11994237 |
attcctagatccttaactctctgtaaagggttgaagtttctaaacctcggcagcaacaaaatagaagacgagtttcctgattggcttcaaacactgcaag |
11994336 |
T |
|
| Q |
803 |
atttgaaagtgttgcttttgcgagacaataagttgcatggtatcattgttaatccaaagctcaagcatccatttccagatttaactatttttgatatctc |
902 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
11994337 |
atttgaaagttttgctgctgcgagacaataagttgcatgatatcattgttaatctaaatacaaagcatccatttccaagtttaactatttttgatatcta |
11994436 |
T |
|
| Q |
903 |
aagcaataactttagtggtcctctaccaaaagcctatttcaaaaagtttgaagccatgatgaatgttactgagttggaatatatgtggaata |
994 |
Q |
| |
|
| ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||||| |||| |||| ||| ||| |||||| |
|
|
| T |
11994437 |
aggcaataactttagtggtccgctaccaaatgcctattttgaaaagtttgaagccatgaagaatgttgctgaattggtatacatgaggaata |
11994528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 53 - 245
Target Start/End: Original strand, 32682113 - 32682311
Alignment:
| Q |
53 |
gattctgtgattgtggcgacaaaagggaacaaaatgaaactggtgaaaattccaaacatctttgtaattattgatttgtcaagaaacaaatttgaaggag |
152 |
Q |
| |
|
|||||||||| | ||| ||||||||||| |||||||| ||| ||||||||||||| | |||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
32682113 |
gattctgtgactatggggacaaaagggagcaaaatgacactagtgaaaattccaagaaactttgtaagtattgatttgtcaagaaacagatttgaaggag |
32682212 |
T |
|
| Q |
153 |
agattccaaacattattggtgagcttcatgc------aatcatagggcttaacctttcccataacagacttacaggtcatattccgaaatccataggaa |
245 |
Q |
| |
|
|||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||||||||| || | ||||||||| ||||||| |||| |
|
|
| T |
32682213 |
agattccaaatgctattggggagcttcatgcactcagaatcagagggcttaacctttcccataacagactcaccgatcatattccccaatccatgggaa |
32682311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 676 - 972
Target Start/End: Original strand, 32681747 - 32682043
Alignment:
| Q |
676 |
ctctatggcaaccaattagaaggtcatattcctaaatccctgtctctctgtaaacggttaatgtttctaaatcttgggagcaacaacatagaagacaatt |
775 |
Q |
| |
|
|||||||||||||| || ||||| ||| |||| |||||| ||||| ||||||| ||| ||||||||| || || |||||||| ||||| ||||||| |
|
|
| T |
32681747 |
ctctatggcaaccacttggaaggccattttccgaaatccttgtctggctgtaaaaagttggagtttctaaacctcggaagcaacaaaatagacgacaatt |
32681846 |
T |
|
| Q |
776 |
ttcctcattagcttcaaaccttgcaatatttgaaagtgttgcttttgcgagacaataagttgcatggtatcattgttaatccaaagctcaagcatccatt |
875 |
Q |
| |
|
| || ||| |||||| || ||||| |||||||||| ||| ||||||| ||||| |||||||||||| |||||| ||| |||| | | |||| ||| |
|
|
| T |
32681847 |
tcccatattggcttcatacaatgcaagatttgaaagtattggttttgcgtgacaacaagttgcatggtcccattgtcaatttaaagaacgaacatctatt |
32681946 |
T |
|
| Q |
876 |
tccagatttaactatttttgatatctcaagcaataactttagtggtcctctaccaaaagcctatttcaaaaagtttgaagccatgatgaatgttact |
972 |
Q |
| |
|
||| |||| |||||||||||||| | || ||||| |||||| | || ||||||| ||||| || ||||||||||||| |||||||||| |
|
|
| T |
32681947 |
tcctagcttaatcatttttgatatctctggaaacaacttcagtggttttatatcaaaagcttatttaaatttttttgaagccatgaagaatgttact |
32682043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 403 - 545
Target Start/End: Original strand, 9423281 - 9423424
Alignment:
| Q |
403 |
aaatgattcttatgaaggaaacttggatttatgtggattacccttgtcaaaaatgtgtggacctgaacaacattctgcaccttcagccaacaactt---t |
499 |
Q |
| |
|
|||||||| |||||||||||||| || ||||| |||| ||||||| || | ||||||||| ||| | ||||| || ||||| ||||||| || | |
|
|
| T |
9423281 |
aaatgatttttatgaaggaaactgggggttatg--gatttcccttgtaaatgaaatgtggacctaaacgaaattctacaacttcacccaacaaattatat |
9423378 |
T |
|
| Q |
500 |
tgcggtgaggagaaatttggatttggatggaaaccagtggcaattg |
545 |
Q |
| |
|
||| ||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
9423379 |
tgcaatgaagagaaatttggatttggatggaaatcagtggcaattg |
9423424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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