View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: R108-tnk75-1 (Length: 374)
Name: R108-tnk75-1
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] R108-tnk75-1 |
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[»] scaffold0474 (1 HSPs) |
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[»] scaffold1674 (1 HSPs) |
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[»] scaffold0468 (1 HSPs) |
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[»] scaffold0008 (1 HSPs) |
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[»] scaffold0511 (1 HSPs) |
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[»] scaffold0133 (1 HSPs) |
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[»] scaffold0005 (2 HSPs) |
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[»] scaffold0154 (1 HSPs) |
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[»] scaffold0031 (1 HSPs) |
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[»] scaffold0533 (1 HSPs) |
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Alignment Details
Target: scaffold0474 (Bit Score: 179; Significance: 2e-96; HSPs: 1)
Name: scaffold0474
Description:
Target: scaffold0474; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 10304 - 10509
Alignment:
Q |
1 |
ggtacctttaaaccatcgtcaacatcaacaagtttgaagctatctacacacttccctttttcaactcatcaataattcaactagttatatcgaaggttgt |
100 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
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|
T |
10304 |
ggtacctttaaaccatcgtcaacatcaacaagtttgaagctatctacacacttcc-tttttcaactcatcaataattcaactagttatatcgaagattgt |
10402 |
T |
|
Q |
101 |
ggagcatttgattttctctccattgttgtcctcttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatat-gtttca |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
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T |
10403 |
ggagcatttgattttctctccattgttgtcctcttgaaattgactcaaaatttgatggataaaaaagattgttgttaaaaatataaaagatatattttca |
10502 |
T |
|
Q |
200 |
aatatat |
206 |
Q |
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|
||||||| |
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|
T |
10503 |
aatatat |
10509 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 29)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 137 - 345
Target Start/End: Complemental strand, 13785839 - 13785633
Alignment:
Q |
137 |
aaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaaaaa |
236 |
Q |
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|
|||||||||||||| |||||||||| | || ||||| | ||||||||| |||||| |||||||||||||||||| | |||||||| ||||||||| |||| |
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|
T |
13785839 |
aaattgactcaaaaattgatggatggagaatattgtcgctaaaaatatgaaagatttgtttcaaatatattttgtgtttctagaatattgttgctgaaaa |
13785740 |
T |
|
Q |
237 |
tatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatattttgca |
336 |
Q |
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||||| || ||||||||| |||||||||| || |||||| | | |||||||||||||||||||||||||||||||||||| |||||||||||||| |
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T |
13785739 |
tatatttatagatagtaaatatatttttgta-tcgtatgaagga-agatttgatgcaaatatatttttaaaaggaatatttgatgcaaatatattttgcg |
13785642 |
T |
|
Q |
337 |
ctgaaggag |
345 |
Q |
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|
||||||||| |
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|
T |
13785641 |
ctgaaggag |
13785633 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 162 - 368
Target Start/End: Original strand, 10115503 - 10115705
Alignment:
Q |
162 |
aaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaaaaatatatccatgaatagtaaatgtatt |
261 |
Q |
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|
||||| |||||||||||||||||||||||| |||||||||||||||||| | ||| | |||||||||| | ||||||||| ||| | | ||||| ||| |
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|
T |
10115503 |
aaaaaaattgttgttaaaaatataaaagatttgtttcaaatatattttgtgcttccataagattgttgttgaaaatatatttatggacaataaat--att |
10115600 |
T |
|
Q |
262 |
tttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatattttgcactgaaggagaaagaaaagacgtatc |
361 |
Q |
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||| | |||| |||||| | |||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||| ||| || |||| || |||| |
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|
T |
10115601 |
tttat-cccgtatgaagga-atatttgatgcaaatatatttttaaacggaatatttgatgcaaatattttttgcactgaatgaggaaaaaaaaacatatc |
10115698 |
T |
|
Q |
362 |
ttcagcg |
368 |
Q |
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|
||||||| |
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|
T |
10115699 |
ttcagcg |
10115705 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 134 - 269
Target Start/End: Original strand, 32260739 - 32260874
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
|
|
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| |||||||||||| | || |||||||||||||| | |
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T |
32260739 |
ttgaaattgactcaaaatttgatggatgaagaagattgttgctaaaaatataaaagaattgtttaaaatatattttgtgttttcagaagattgttgctga |
32260838 |
T |
|
Q |
234 |
aaatatatccatgaatagtaaatgtatttttgtacc |
269 |
Q |
|
|
|||||||| ||||| | ||||| |||||||||||| |
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|
T |
32260839 |
aaatatatttatgaacaataaatatatttttgtacc |
32260874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 134 - 346
Target Start/End: Complemental strand, 11693760 - 11693551
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
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|||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||| | ||||| |||||||||| | | || | |||||||||||| | |
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T |
11693760 |
ttgaaattgactcaaaatttgatggatgaagaagattattgctaaaattataaaaattttgttttaaatatatttcgtgctttcaaaagattgttgctga |
11693661 |
T |
|
Q |
234 |
aaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatatttt |
333 |
Q |
|
|
|||||||| ||| | | ||||| |||||||||| ||| |||||| | | |||||||||||||||||||||||| |||||||| | ||||||| |||| |
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|
T |
11693660 |
aaatatatttatggacaataaatatatttttgta-ccgtatgaagga-agatttgatgcaaatatatttttaaagggaatattcaatgcaaatat-tttt |
11693564 |
T |
|
Q |
334 |
gcactgaaggaga |
346 |
Q |
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|
|| |||||||||| |
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|
T |
11693563 |
gcgctgaaggaga |
11693551 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 344
Target Start/End: Original strand, 14352747 - 14352870
Alignment:
Q |
219 |
gaagattgttgctaaaaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttg |
318 |
Q |
|
|
||||||||||| | ||||||||| ||||||||||||| |||||||||||| | |||||| | | |||||||||||||||||||||||| |||||||||| |
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|
T |
14352747 |
gaagattgttgttgaaaatatatttatgaatagtaaatatatttttgtacc-gtatgaagga-agatttgatgcaaatatatttttaaagggaatatttg |
14352844 |
T |
|
Q |
319 |
aaacaaatatattttgcactgaagga |
344 |
Q |
|
|
| |||||||||||||| ||||||| |
|
|
T |
14352845 |
atgcaaatatattttgcgttgaagga |
14352870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 2949805 - 2949736
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||| ||||||||| || ||||||| |||||||||||||||| |||||||||||||||||| |
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|
T |
2949805 |
tgactcaaaatttcatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
2949736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 4131872 - 4131803
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
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||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
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|
T |
4131872 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
4131803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 9460003 - 9459934
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
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|
T |
9460003 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
9459934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 9463830 - 9463761
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
9463830 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
9463761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 15295429 - 15295360
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||| ||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
15295429 |
tgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
15295360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 17325217 - 17325148
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
17325217 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
17325148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 39931772 - 39931841
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
39931772 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
39931841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 46432626 - 46432557
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
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|
T |
46432626 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
46432557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 47905966 - 47906035
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
47905966 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
47906035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 48664862 - 48664931
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
48664862 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
48664931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 6997224 - 6997293
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||| ||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
6997224 |
tgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttg |
6997293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 24325357 - 24325422
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
24325357 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
24325422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 31736105 - 31736036
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||| | | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
31736105 |
tgactcaaaatttgatggaaggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
31736036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 45694010 - 45693945
Alignment:
Q |
145 |
tcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
45694010 |
tcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
45693945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 6115701 - 6115638
Alignment:
Q |
147 |
aaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
6115701 |
aaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
6115638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 16561145 - 16561210
Alignment:
Q |
145 |
tcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||||||| |||||||| || ||||||| ||||||||||||| || |||||||||||||||||| |
|
|
T |
16561145 |
tcaaaatttgttggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttg |
16561210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 27339720 - 27339651
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||| |||||||| ||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
27339720 |
tgactccaaatttgacggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
27339651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 28998834 - 28998765
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| ||||| |||||||||| ||||| |||||||||||| |
|
|
T |
28998834 |
tgactcaaaatttgatggatggagaatattgttgctaaaactataaaagatttgtttaaaatatattttg |
28998765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 29004550 - 29004481
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| ||||| |||||||||| ||||| |||||||||||| |
|
|
T |
29004550 |
tgactcaaaatttgatggatggagaatattgttgctaaaactataaaagatttgtttaaaatatattttg |
29004481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 27337522 - 27337453
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||| |||||||||||||| || ||||||| |||||||||| ||||| |||||||||||||||||| |
|
|
T |
27337522 |
tgactccaaatttgatggatggggaatattgttgctaaaaatatataagatttgtttcaaatatattttg |
27337453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 21948746 - 21948704
Alignment:
Q |
168 |
attgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
21948746 |
attgttgctaaaaatataaaagatttgtttcaaatatattttg |
21948704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 173
Target Start/End: Original strand, 14352422 - 14352461
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgtt |
173 |
Q |
|
|
|||||||||||| ||||||||||||||||| ||||||||| |
|
|
T |
14352422 |
ttgaaattgacttaaaatttgatggatgaagaagattgtt |
14352461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 32260883 - 32260937
Alignment:
Q |
291 |
gcaaatatatttttaaaaggaatatttgaaacaaatatattttgcactgaaggag |
345 |
Q |
|
|
|||||||||| |||||| ||||||||||| ||||||||||||||| ||||||| |
|
|
T |
32260883 |
gcaaatatatatttaaagggaatatttgatgcaaatatattttgcatcgaaggag |
32260937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 6996067 - 6996108
Alignment:
Q |
169 |
ttgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||| ||||||||||||||| |||||||||||||||||| |
|
|
T |
6996067 |
ttgttgctaaaaatataaaagacttgtttcaaatatattttg |
6996108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 88; Significance: 3e-42; HSPs: 39)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 134 - 353
Target Start/End: Complemental strand, 12310622 - 12310405
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
|
|
|||||||| ||| |||||| ||||||||| |||||||||| || ||||||||||| |||||||||||||||||| | |||||||||||||||||| | |
|
|
T |
12310622 |
ttgaaattaactttaaatttaatggatgaagaagattgttgctactgatataaaagatttgtttcaaatatattttgtgcttctagaagattgttgctga |
12310523 |
T |
|
Q |
234 |
aaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatatttt |
333 |
Q |
|
|
|| |||| | | | ||| ||| |||||||||||| | |||||| | | |||||||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
12310522 |
aattatacttaaggacagttaatatatttttgtacc-gtatgaagga-agatttgatgtaaatatatttttaaaaggaatatttgatgcaaatatatttt |
12310425 |
T |
|
Q |
334 |
gcactgaaggagaaagaaaa |
353 |
Q |
|
|
||||| |||||||||||||| |
|
|
T |
12310424 |
gcactaaaggagaaagaaaa |
12310405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 10690677 - 10690752
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||||||||||||||||||||||| | | |||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
T |
10690677 |
ttgaaattgactcaaaatttgatggagggagaagattgttgctaaaaatataaaag-tatgtttcaaatatattttg |
10690752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 443336 - 443405
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
443336 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
443405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 1849675 - 1849744
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||| ||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
1849675 |
tgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
1849744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 3035425 - 3035494
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
3035425 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
3035494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 7092758 - 7092689
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
7092758 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
7092689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 7095005 - 7094936
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
7095005 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
7094936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 7472564 - 7472495
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
7472564 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
7472495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 11756935 - 11757004
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
11756935 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
11757004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 18345247 - 18345316
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
18345247 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
18345316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 20625744 - 20625813
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
20625744 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
20625813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 20629635 - 20629704
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
20629635 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
20629704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 20642054 - 20642123
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
20642054 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
20642123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 24258168 - 24258237
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||| ||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
24258168 |
tgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
24258237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 37412706 - 37412637
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
37412706 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
37412637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 21470874 - 21470804
Alignment:
Q |
140 |
ttgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||| |||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
21470874 |
ttgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
21470804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 1606181 - 1606246
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
||||||||||||||||||| ||| || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
1606181 |
tgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
1606246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 3677007 - 3677076
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||||||||||||| |||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
3677007 |
tgactcaaaatttgatagatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
3677076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 20299165 - 20299234
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| | |||||||||||||||| |
|
|
T |
20299165 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttg |
20299234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 28485275 - 28485340
Alignment:
Q |
145 |
tcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||| || ||||||| ||||||||||||| || |||||||||||||||||| |
|
|
T |
28485275 |
tcaaaatttgatggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttg |
28485340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 28487259 - 28487328
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| || ||||||||||||||| |
|
|
T |
28487259 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgcttcaaatatattttg |
28487328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 38395996 - 38396065
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||| |||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
38395996 |
tgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
38396065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 47865338 - 47865407
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||| |||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
47865338 |
tgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
47865407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 40281982 - 40281911
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaaga--ttgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||||| |||| |||||| ||||||||||||| || |||||||||||||||||| |
|
|
T |
40281982 |
tgactcaaaatttgatggatgaagaagaatttgttgctaaaaatataaaatatttgtttcaaatatattttg |
40281911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 12485087 - 12484984
Alignment:
Q |
165 |
aagattgttgttaaaaatataaaagatatgtttcaaatatattt-tgcgattctagaagattgttgctaaaaatatatccatgaatagtaaatgtatttt |
263 |
Q |
|
|
||||||||||| |||||||||||||| |||||||||||||||| || | ||| || ||||||||||| ||||||||| ||| |||| |||| |||||| |
|
|
T |
12485087 |
aagattgttgtagaaaatataaaagatttgtttcaaatatatttgtgtgcttcaaggagattgttgctgaaaatatatttatggatagcaaatatatttt |
12484988 |
T |
|
Q |
264 |
tgta |
267 |
Q |
|
|
|||| |
|
|
T |
12484987 |
tgta |
12484984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 12506518 - 12506415
Alignment:
Q |
165 |
aagattgttgttaaaaatataaaagatatgtttcaaatatattt-tgcgattctagaagattgttgctaaaaatatatccatgaatagtaaatgtatttt |
263 |
Q |
|
|
||||||||||| |||||||||||||| |||||||||||||||| || | ||| || ||||||||||| ||||||||| ||| |||| |||| |||||| |
|
|
T |
12506518 |
aagattgttgtagaaaatataaaagatttgtttcaaatatatttgtgtgcttcaaggagattgttgctgaaaatatatttatggatagcaaatatatttt |
12506419 |
T |
|
Q |
264 |
tgta |
267 |
Q |
|
|
|||| |
|
|
T |
12506418 |
tgta |
12506415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 12657711 - 12657608
Alignment:
Q |
165 |
aagattgttgttaaaaatataaaagatatgtttcaaatata-ttttgcgattctagaagattgttgctaaaaatatatccatgaatagtaaatgtatttt |
263 |
Q |
|
|
|||||| |||| |||||||||||||| ||||||||||||| ||||| | ||| || ||||||||||| ||||||||| |||| |||| |||| |||||| |
|
|
T |
12657711 |
aagattattgtagaaaatataaaagatttgtttcaaatatatttttgtgcttcaaggagattgttgctgaaaatatattcatggatagcaaatatatttt |
12657612 |
T |
|
Q |
264 |
tgta |
267 |
Q |
|
|
|||| |
|
|
T |
12657611 |
tgta |
12657608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 21989863 - 21989929
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatatt |
207 |
Q |
|
|
|||| |||||||||||||||| | || ||||||| |||||||||||||||| ||||||||||||||| |
|
|
T |
21989863 |
tgacccaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatt |
21989929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 7349857 - 7349792
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
|||||||||| |||||||||| | || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
7349857 |
tgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
7349792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 7352236 - 7352171
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
|||||||||| |||||||||| | || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
7352236 |
tgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
7352171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 7470611 - 7470542
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||| ||| ||||||||||||| || |||||||||||||||||| |
|
|
T |
7470611 |
tgactcaaaatttgatggatggagaatattattgctaaaaatataaaacatttgtttcaaatatattttg |
7470542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 31156490 - 31156425
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
|||||||||| |||||||||| | || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
31156490 |
tgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
31156425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 42331583 - 42331514
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||| ||||||||||| ||||| || ||||||| |||||||||||||||| ||||| |||||||||||| |
|
|
T |
42331583 |
tgacttaaaatttgatgaatgaagaatattgttgctaaaaatataaaagatttgttttaaatatattttg |
42331514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 40281828 - 40281741
Alignment:
Q |
282 |
atatttgatgcaaatatatttttaaaa-ggaatatttgaaacaaatatattttgcactgaaggagaaagaaaagacgtatcttcagcg |
368 |
Q |
|
|
||||||||||||||||||| ||||||| ||||||||||| |||||| |||| |||||||||||| |||| |||||||||||||| |
|
|
T |
40281828 |
atatttgatgcaaatatatatttaaaagggaatatttgatgcaaatactatttgtgctgaaggagaaaaaaaaaacgtatcttcagcg |
40281741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 38393700 - 38393762
Alignment:
Q |
148 |
aaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||||||||||| | || ||||||| |||||||||| ||||| |||||||||||||||||| |
|
|
T |
38393700 |
aaatttgatggatggagaatattgttgctaaaaatatataagatttgtttcaaatatattttg |
38393762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 6628840 - 6628917
Alignment:
Q |
165 |
aagattgttgttaaaaatataaaagatatgtttcaaatata-ttttgcgattctagaagattgttgctaaaaatatat |
241 |
Q |
|
|
||||||| ||| |||||||||||||| ||||||||||||| ||||| | ||| || ||||||||||||||||||||| |
|
|
T |
6628840 |
aagattgctgtagaaaatataaaagatttgtttcaaatatatttttgtgcttcaaggagattgttgctaaaaatatat |
6628917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 317
Target Start/End: Original strand, 10690811 - 10690846
Alignment:
Q |
282 |
atatttgatgcaaatatatttttaaaaggaatattt |
317 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| |
|
|
T |
10690811 |
atatttgatgcaaatatatttttaaaaggaatattt |
10690846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 20297108 - 20297158
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagat |
191 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |
|
|
T |
20297108 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagat |
20297158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 40281858 - 40281810
Alignment:
Q |
282 |
atatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatat |
330 |
Q |
|
|
||||||||| | ||||||||||||||||||||||||| ||||||||| |
|
|
T |
40281858 |
atatttgatacggatatatttttaaaaggaatatttgatgcaaatatat |
40281810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 22)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 134 - 368
Target Start/End: Complemental strand, 41304971 - 41304748
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
|
|
|||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||| | ||| |||||||||||||| | |
|
|
T |
41304971 |
ttgaaattgactcaaaatttgatggatgaagaagatt-----taaaaatataaaagatttgt--caaatatattttgtgcttccagaagattgttgctga |
41304879 |
T |
|
Q |
234 |
aaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatatttt |
333 |
Q |
|
|
||||||| ||| ||||||||| |||||||||| | |||||| | | ||||||||||||||||||||| |||||||||||||| |||||||||||| |
|
|
T |
41304878 |
caatatatttatggatagtaaatatatttttgta--catatgaagga-agatttgatgcaaatatattttt-aaaggaatatttgatgcaaatatatttt |
41304783 |
T |
|
Q |
334 |
gcactgaaggagaaagaaaagacgtatcttcagcg |
368 |
Q |
|
|
|| ||||||| || |||| |||||||||||||| |
|
|
T |
41304782 |
gcgtcgaaggaggaaaaaaaaacgtatcttcagcg |
41304748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 134 - 368
Target Start/End: Original strand, 15693576 - 15693808
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
|
|
|||||||||||| ||||||||||||||||| || ||||||| |||||||||||| ||| |||||||||||||||||| | ||| | || |||||||| | |
|
|
T |
15693576 |
ttgaaattgacttaaaatttgatggatgaataatattgttgctaaaaatataaa-gatttgtttcaaatatattttgtgcttccaaaaacttgttgctga |
15693674 |
T |
|
Q |
234 |
aaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatatttt |
333 |
Q |
|
|
|||||||| ||| | ||||| |||||||||||| | |||||| | | |||||||||||||||||||||||| || |||||||| |||||||||||| |
|
|
T |
15693675 |
aaatatatttatgggcaataaatatatttttgtacc-gtatgaagga-agatttgatgcaaatatatttttaaaggggatatttgatgcaaatatatttt |
15693772 |
T |
|
Q |
334 |
gcactgaaggagaaagaaa-agacgtatcttcagcg |
368 |
Q |
|
|
| |||||||||||| ||| | |||||||||||||| |
|
|
T |
15693773 |
gtgctgaaggagaaaaaaagaaacgtatcttcagcg |
15693808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 348
Target Start/End: Original strand, 39286881 - 39287089
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
|
|
|||||||||| |||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||||||| ||||| |||||||||||||| | |
|
|
T |
39286881 |
ttgaaattgattcaaaatttgatggatga----gattgttgctaaaaatataaatgatttgtttcaaatatattttatgattccagaagattgttgctta |
39286976 |
T |
|
Q |
234 |
aaatatatccatgaatagtaaatgtatttttgtacccgaatgaa-gaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatattt |
332 |
Q |
|
|
|||||||| ||| | | ||||| |||||||||| || ||||| |||| |||||||||||||||||| ||| ||||||||||| | |||||||||| |
|
|
T |
39286977 |
aaatatatttatggacaataaatatatttttgta-ccatatgaatgaag--atttgatgcaaatatattcttacaaggaatatttaatgcaaatatattg |
39287073 |
T |
|
Q |
333 |
tgcactgaaggagaaa |
348 |
Q |
|
|
| |||||||||||| |
|
|
T |
39287074 |
cgtgctgaaggagaaa |
39287089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 135 - 269
Target Start/End: Complemental strand, 41303629 - 41303494
Alignment:
Q |
135 |
tgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaa-tataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
|
|
||||||||||||| ||||||||||||||| |||||||||| |||||| |||||||||| |||||||||||||||||| | ||| | |||||||||||| | |
|
|
T |
41303629 |
tgaaattgactcagaatttgatggatgaagaagattgttgctaaaaaatataaaagatttgtttcaaatatattttgtgcttccataagattgttgctga |
41303530 |
T |
|
Q |
234 |
aaatatatccatgaatagtaaatgtatttttgtacc |
269 |
Q |
|
|
|||||||| ||| | ||||||| || ||||||||| |
|
|
T |
41303529 |
aaatatatttatggacagtaaatataattttgtacc |
41303494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 28568339 - 28568411
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||| |
|
|
T |
28568339 |
ttgaaattgactcaaaatttgatggatgaagaatattgttgttaaaaatataaaagatttgtttcaaatatat |
28568411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 35216174 - 35216105
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
35216174 |
tgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
35216105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 35218555 - 35218486
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
35218555 |
tgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
35218486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 28568747 - 28568671
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||||| |||||| || ||||||| ||||| |||||||||| |||||||||||||||||| |
|
|
T |
28568747 |
ttgaaattgactcaaaatttgatagatgaagaatattgttgctaaaactataaaagatttgtttcaaatatattttg |
28568671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 27136495 - 27136426
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||||| || |||| || |||||||||||||||| |||||||||||||||||| |
|
|
T |
27136495 |
tgactcaaaatttgatggatgaagaatattggtgctaaaaatataaaagatttgtttcaaatatattttg |
27136426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 27583897 - 27583828
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||| ||||||||||||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
27583897 |
tgactcaaattttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
27583828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 42452459 - 42452528
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||| ||||||||||||||||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
42452459 |
tgacttaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
42452528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 42924084 - 42924015
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
42924084 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
42924015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 23452819 - 23452751
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatatttt |
209 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| ||||||||||||||||| |
|
|
T |
23452819 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatttt |
23452751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 34575693 - 34575624
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||||| || ||||||| |||||||||||||||| |||| |||||||||||| |
|
|
T |
34575693 |
tgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgttctaaatatattttg |
34575624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 27583775 - 27583690
Alignment:
Q |
282 |
atatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatattttgcactgaaggagaaagaaaagacgtatcttcagcg |
368 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||| ||||||| | || |||||||||||||| || | | |||||||||||| |
|
|
T |
27583775 |
atatttgatgcaaatatattttgaaaaggaatatttgatgcaaatat-tctttcactgaaggagaaaaaagaaatgtatcttcagcg |
27583690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 7502572 - 7502629
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagat |
191 |
Q |
|
|
||||||||| |||||||||||||||||||| |||||||||| | ||| |||||||||| |
|
|
T |
7502572 |
ttgaaattgtctcaaaatttgatggatgaagaagattgttgctcaaagtataaaagat |
7502629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 368
Target Start/End: Original strand, 7502691 - 7502777
Alignment:
Q |
284 |
atttgatgcaaatatatttttaaaaggaatatttgaaacaaatatattttgcactgaaggag--aaagaaaagacgtatcttcagcg |
368 |
Q |
|
|
|||||||||||||||||||||||| | ||||||||| |||||||||||| | |||||||| ||| || | |||||||||||||| |
|
|
T |
7502691 |
atttgatgcaaatatatttttaaaggaaatatttgatgcaaatatattttacgttgaaggaggaaaaaaataaacgtatcttcagcg |
7502777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 34575588 - 34575519
Alignment:
Q |
284 |
atttgatgcaaatatatttttaaaaggaatatttgaaacaaatatattttgcactgaaggagaaagaaaag |
354 |
Q |
|
|
|||||||||||||||||||| ||| ||||||||||| ||||||| | || |||||||||||||| ||||| |
|
|
T |
34575588 |
atttgatgcaaatatattttgaaagggaatatttgatgcaaatat-tctttcactgaaggagaaaaaaaag |
34575519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 26345387 - 26345463
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcg |
212 |
Q |
|
|
||||||||||||||||| || || || ||||||||||||| ||||||||| ||| || ||||| |||||||||||||| |
|
|
T |
26345387 |
ttgaaattgactcaaaagtttctgaat-aaaaagattgttgctaaaaatat-aaatatttgtttaaaatatattttgcg |
26345463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 163
Target Start/End: Complemental strand, 10943010 - 10942981
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaa |
163 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
10943010 |
ttgaaattgactcaaaatttgatggatgaa |
10942981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 163
Target Start/End: Complemental strand, 10948879 - 10948850
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaa |
163 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
10948879 |
ttgaaattgactcaaaatttgatggatgaa |
10948850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 368
Target Start/End: Complemental strand, 28568616 - 28568534
Alignment:
Q |
284 |
atttgatgcaaatatatttttaaaaggaatatttgaaacaaatatattttgcactgaaggagaaagaaaagacgtatcttcagcg |
368 |
Q |
|
|
|||||||||||||||||||| ||| ||||||||||| || |||| | || ||| |||||||||| |||| | |||||||||||| |
|
|
T |
28568616 |
atttgatgcaaatatattttgaaagggaatatttgatgcatatat-tctttcaccgaaggagaaa-aaaaaaagtatcttcagcg |
28568534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 81; Significance: 5e-38; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 134 - 342
Target Start/End: Original strand, 30443015 - 30443221
Alignment:
Q |
134 |
ttgaaattgactcaaaattt--gatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgct |
231 |
Q |
|
|
|||||||||||||||||||| |||||||||| || ||||||||||||||||||| |||| ||||||||||||||||| | ||| |||||||||||||| |
|
|
T |
30443015 |
ttgaaattgactcaaaatttatgatggatgaagaatattgttgttaaaaatataagagatttgtttcaaatatattttttgcttccagaagattgttgct |
30443114 |
T |
|
Q |
232 |
aaaaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatatt |
331 |
Q |
|
|
||||||||| ||| | | |||| ||| |||||| ||| || ||| | | ||||||||||||| |||||||||||| ||||||||| ||||||||||| |
|
|
T |
30443115 |
gaaaatatatttatggaca--aaatatatgtttgta-ccgtataaagga-agatttgatgcaaatgtatttttaaaagaaatatttgatacaaatatatt |
30443210 |
T |
|
Q |
332 |
ttgcactgaag |
342 |
Q |
|
|
|||| |||||| |
|
|
T |
30443211 |
ttgcgctgaag |
30443221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 134 - 345
Target Start/End: Original strand, 30445222 - 30445433
Alignment:
Q |
134 |
ttgaaattgactcaaaattt--gatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgct |
231 |
Q |
|
|
|||||||||||||||||| | |||||||||| || ||||||| || |||||||||| || |||||||||||||||||| | ||| |||| ||||||||| |
|
|
T |
30445222 |
ttgaaattgactcaaaatctatgatggatgaagaatattgttgctagaaatataaaatatttgtttcaaatatattttgtgcttccagaatattgttgct |
30445321 |
T |
|
Q |
232 |
aaaaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatatt |
331 |
Q |
|
|
||||||||| ||||| | ||||| |||||||||| || |||||| | | |||||||||||||||||||| ||||||||||||||| | ||||||| |
|
|
T |
30445322 |
gaaaatatatttatgaacaataaatatatttttgta-ccatatgaagga-agatttgatgcaaatatattttaaaaaggaatatttgatgcctatatatt |
30445419 |
T |
|
Q |
332 |
ttgcactgaaggag |
345 |
Q |
|
|
|||| ||||||||| |
|
|
T |
30445420 |
ttgcgctgaaggag |
30445433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 2629469 - 2629400
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||| ||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
2629469 |
tgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
2629400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 30035186 - 30035117
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
30035186 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
30035117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 20526556 - 20526624
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatatttt |
209 |
Q |
|
|
|||||||||||||||||| |||| || ||||||| |||||||||||||||| ||||||||||||||||| |
|
|
T |
20526556 |
tgactcaaaatttgatgggtgaagaatattgttgctaaaaatataaaagatttgtttcaaatatatttt |
20526624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 5275918 - 5275849
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| | |||||||||||||||| |
|
|
T |
5275918 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttg |
5275849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 18317761 - 18317830
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||| ||| ||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
18317761 |
tgactcaaaatttgaaggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
18317830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 19705155 - 19705086
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||| ||| || ||||||| |||||||||||||||| ||||||||| |||||||| |
|
|
T |
19705155 |
tgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaagatattttg |
19705086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 12196094 - 12196029
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
|||||||||| |||||||||| | || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
12196094 |
tgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
12196029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 22858526 - 22858457
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| ||||||| |||| |
|
|
T |
22858526 |
tgactcaaaatttgatggatgaagaatattgttaataaaaatataaaagatttgttttaaatatactttg |
22858457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 26933148 - 26933083
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
|||||||||| |||||||||| | || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
26933148 |
tgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
26933083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 30966933 - 30967002
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||| |||||||||||||| | || ||||||| |||||||||||||||| | |||||||||||||||| |
|
|
T |
30966933 |
tgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttg |
30967002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 12158521 - 12158575
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaa |
188 |
Q |
|
|
|||||||||| ||||||||||||| ||||| |||||||||| ||||||||||||| |
|
|
T |
12158521 |
ttgaaattgagtcaaaatttgatgaatgaagaagattgttgctaaaaatataaaa |
12158575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 17011789 - 17011837
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaag |
189 |
Q |
|
|
||||| ||||||||||||||||| || ||| ||| |||||||||||||| |
|
|
T |
17011789 |
tgacttaaaatttgatggatgaagaatattattgctaaaaatataaaag |
17011837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 13986381 - 13986215
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
|
|
|||||||||||||||||||| ||||||||| |||||||||| ||||||||| |||||| ||||| |||||||||||| | |||||||||||||||| | | |
|
|
T |
13986381 |
ttgaaattgactcaaaattttatggatgaagaagattgttgctaaaaatat-aaagatttgttttaaatatattttgtggttctagaagattgttgttga |
13986283 |
T |
|
Q |
234 |
aaatatatccatgaatagtaaatgtatttttgtacccgaatg-aagaagatatttgatgcaaatatatttt |
303 |
Q |
|
|
|||||||| ||| ||||| ||| ||||||||| ||| ||| |||||| |||||||||||||||||||| |
|
|
T |
13986282 |
aaatatatttatggatagttaataaatttttgta-ccgcatgaaagaag--atttgatgcaaatatatttt |
13986215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 3265742 - 3265673
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
3265742 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
3265673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 3873760 - 3873829
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
3873760 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
3873829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 15808972 - 15809041
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
15808972 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
15809041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 32339104 - 32339173
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
32339104 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
32339173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 43529881 - 43529950
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
43529881 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
43529950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 41382429 - 41382497
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatatttt |
209 |
Q |
|
|
||||||||||||||||||||| | || |||||||||||||||||||||||| |||||| |||||||||| |
|
|
T |
41382429 |
tgactcaaaatttgatggatggagaatattgttgttaaaaatataaaagatttgtttcgaatatatttt |
41382497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 608482 - 608549
Alignment:
Q |
143 |
actcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||| ||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
608482 |
actcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
608549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 11701457 - 11701333
Alignment:
Q |
218 |
agaagattgttgctaaaaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatattt |
317 |
Q |
|
|
|||||||||||||| ||||||||| ||| ||||||| |||||||||||| | |||||| |||||| ||||||||||||||| ||||||||| |
|
|
T |
11701457 |
agaagattgttgctgaaaatatatttatggtcagtaaatatatttttgtaccgtatggaagaa-----ttgatgtaaatatatttttaaagggaatattt |
11701363 |
T |
|
Q |
318 |
gaaacaaatatattttgcactgaaggagaa |
347 |
Q |
|
|
|| |||||||||||||||| ||||||||| |
|
|
T |
11701362 |
gatgcaaatatattttgcacggaaggagaa |
11701333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 28283803 - 28283734
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||| ||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
28283803 |
tgactcaaaatttgatggatggagaatatttttgctaaaaatataaaagatttgtttcaaatatattttg |
28283734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 41384503 - 41384571
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatatttt |
209 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||| |||||||||| |
|
|
T |
41384503 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcgaatatatttt |
41384571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 30679263 - 30679188
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||||||||||||||||||||||||||| || | ||||| |||||||| ||||||| ||||| | |||||||||| |
|
|
T |
30679263 |
ttgaaattgactcaaaatttgatggatgaagaata-tgttggtaaaaataaaaaagatttgttttagatatattttg |
30679188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 11701485 - 11701435
Alignment:
Q |
135 |
tgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatata |
185 |
Q |
|
|
||||||||||||||||||||||||| ||| |||||||||| | |||||||| |
|
|
T |
11701485 |
tgaaattgactcaaaatttgatggacgaagaagattgttgctgaaaatata |
11701435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 24)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 38209263 - 38209160
Alignment:
Q |
137 |
aaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaaaaa |
236 |
Q |
|
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||| | ||| |||||||||||| | |||| |
|
|
T |
38209263 |
aaattgactcaaaatttgatggatgaaaaatattgttgttaaaaatataaaagatttgttttaaatatattttgtgcttcaagaagattgttgttgaaaa |
38209164 |
T |
|
Q |
237 |
tata |
240 |
Q |
|
|
|||| |
|
|
T |
38209163 |
tata |
38209160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 134 - 269
Target Start/End: Complemental strand, 29609994 - 29609859
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
|
|
|||||||| | ||||||||||||||||||| || ||||||| ||||| ||| ||| | |||||||||||||||| | |||||||||||||||| | | |
|
|
T |
29609994 |
ttgaaattaattcaaaatttgatggatgaagaatattgttgctaaaagtattcttgatttttttcaaatatattttgtgcttctagaagattgttgatga |
29609895 |
T |
|
Q |
234 |
aaatatatccatgaatagtaaatgtatttttgtacc |
269 |
Q |
|
|
|||||||| ||||| ||||||| |||||||||||| |
|
|
T |
29609894 |
aaatatatttatgaagagtaaatatatttttgtacc |
29609859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 54929274 - 54929077
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcga--ttctagaagattgttgct |
231 |
Q |
|
|
|||||||||||| ||||||||||||| || || ||||||| |||||||||||||||| || || |||| ||||||| | || ||||||| ||||| |
|
|
T |
54929274 |
ttgaaattgacttaaaatttgatgga--aataatattgttgctaaaaatataaaagatttgatttaaatgtattttgtgtgctttcggaagattattgct |
54929177 |
T |
|
Q |
232 |
aaaaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatatt |
331 |
Q |
|
|
||||||||| ||| | | |||| |||||||||||| | |||||| | | ||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
T |
54929176 |
gaaaatatatttatggacaaaaaatatatttttgtacc-gtatgaagga-agatttgatgcaaatatatttttaataggaatatttgatgcaaatatatt |
54929079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 22135209 - 22135140
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
22135209 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
22135140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 24347969 - 24348038
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
24347969 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
24348038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 56030199 - 56030268
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
56030199 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
56030268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 38890691 - 38890624
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattt |
208 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||| |
|
|
T |
38890691 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattt |
38890624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 335
Target Start/End: Original strand, 10979613 - 10979780
Alignment:
Q |
165 |
aagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaaaaatatatccatgaatagtaaatgtattttt |
264 |
Q |
|
|
||||||||| | |||||||||||||| | ||||||||||||||| | ||| |||||||||||||| ||||||||| ||| | | |||| ||||||| |
|
|
T |
10979613 |
aagattgttaatgaaaatataaaagatttacttcaaatatattttgtgcttcaagaagattgttgctgaaaatatatttatggacaacaaatatattttt |
10979712 |
T |
|
Q |
265 |
gtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatattttgc |
335 |
Q |
|
|
|| | | |||||| | | ||||||||||||||||||||| |||||||||||||| ||||||||| |||| |
|
|
T |
10979713 |
gt-gctgtatgaagga-agatttgatgcaaatatattttt-aaaggaatatttgatgcaaatatatcttgc |
10979780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 5100753 - 5100822
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| ||||| |||||||||||| |
|
|
T |
5100753 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgttttaaatatattttg |
5100822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 14788011 - 14787942
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || | ||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
14788011 |
tgactcaaaatttgatggatggagaataatgttgctaaaaatataaaagatttgtttcaaatatattttg |
14787942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 22132973 - 22132908
Alignment:
Q |
145 |
tcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
22132973 |
tcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
22132908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 47211298 - 47211229
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||| ||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
47211298 |
tgacttaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
47211229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 5516846 - 5516653
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
|
|
|||||||||| | ||||||||||| ||| | || ||||||| |||||||||||| || ||||||||||||||||| | || | |||||| |||||||| |
|
|
T |
5516846 |
ttgaaattgatttaaaatttgatgaatggagaatattgttgctaaaaatataaatgaattgtttcaaatatattttatgtttttggaagatcgttgctaa |
5516747 |
T |
|
Q |
234 |
aaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaa-ggaatatttgaaacaaatatattt |
332 |
Q |
|
|
|||||||| || ||| ||||| ||||||| || || |||||| | || |||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
T |
5516746 |
aaatatatttatagataataaatatattttttta-tcgtatgaagga-at-----atgcaaatatatttttaaaagggaatatttgatgcaaatatattt |
5516654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 14789561 - 14789500
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaat |
202 |
Q |
|
|
||||||||||||||||||||||| || | ||||| |||||||||||||||| |||||||||| |
|
|
T |
14789561 |
tgactcaaaatttgatggatgaagaataatgttgctaaaaatataaaagatttgtttcaaat |
14789500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 44600418 - 44600353
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
|||||||||| |||||||||| | || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
44600418 |
tgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
44600353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 9022074 - 9022138
Alignment:
Q |
145 |
tcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatatttt |
209 |
Q |
|
|
||||||||| |||||||| ||| ||||||||| |||||||||| ||| ||||||||||||||||| |
|
|
T |
9022074 |
tcaaaattttatggatgagaaatattgttgttgaaaatataaatgatttgtttcaaatatatttt |
9022138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 17662809 - 17662747
Alignment:
Q |
148 |
aaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||||||||||| | || ||||||| |||||||||||||||| ||||| |||||||||||| |
|
|
T |
17662809 |
aaatttgatggatggagaatattgttgctaaaaatataaaagatttgttttaaatatattttg |
17662747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 9863509 - 9863578
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||||||||||| ||||||||| | |||||| |||||||||||| ||| ||||||||| |||||||| |
|
|
T |
9863509 |
tgactcaaaatttgttggatgaaatatattgttactaaaaatataaatgatttgtttcaaacatattttg |
9863578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 30136331 - 30136390
Alignment:
Q |
147 |
aaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
||||||||||| ||| | || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
30136331 |
aaaatttgatgaatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
30136390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 32274398 - 32274322
Alignment:
Q |
163 |
aaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaaaaatatat |
241 |
Q |
|
|
||||||||||| ||||||||||||| ||||||| |||||||||||| | |||||||| ||||||||| ||||||||| |
|
|
T |
32274398 |
aaaagattgttactaaaaatataaaa-atatgttg-aaatatattttgtgcttctagaaaattgttgctgaaaatatat |
32274322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 19322418 - 19322487
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgtt-gttaaaaatataaaagatatgtttcaaatatatttt |
209 |
Q |
|
|
||||||||||||||||||||| | || ||| || | |||||||||||||||| ||||| ||||||||||| |
|
|
T |
19322418 |
tgactcaaaatttgatggatggagaatattttttgctaaaaatataaaagatttgttttaaatatatttt |
19322487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 38209131 - 38209080
Alignment:
Q |
284 |
atttgatgcaaatatattttt-aaaaggaatatttgaaacaaatatattttg |
334 |
Q |
|
|
||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |
|
|
T |
38209131 |
atttgatgcaaatatatatttgaaaaggaatatttgatgcaaatatattttg |
38209080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 9022193 - 9022237
Alignment:
Q |
284 |
atttgatgcaaatatatttttaaaaggaatatttgaaacaaatat |
328 |
Q |
|
|
|||||||||||||||||||| ||| ||||||||||| ||||||| |
|
|
T |
9022193 |
atttgatgcaaatatattttaaaagggaatatttgatgcaaatat |
9022237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 10112636 - 10112701
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||| |||||||| || ||||| || ||||||| |||||||||||||| ||||||||||||||||| |
|
|
T |
10112636 |
tgacttaaaatttgttgaatgaagaatattgttgctaaaaatataaaag----gtttcaaatatattttg |
10112701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 21)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 53974204 - 53974107
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgct |
231 |
Q |
|
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||||||| | ||| |||||||||||||| |
|
|
T |
53974204 |
ttgaaattgactcaaaatttgatggatgaagaatgttgttgttaaaaatataaaagatttgtttcaattatattttgtgcttccagaagattgttgct |
53974107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 11072637 - 11072741
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
|
|
|||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||||||||||||| ||| | ||| |||||||||||||| | |
|
|
T |
11072637 |
ttgaaattgactcaaaatttgatggatgaagaagattgttgcaaaaaatataaatgatttgtttcaaatatatcttgtgcttccagaagattgttgctga |
11072736 |
T |
|
Q |
234 |
aaata |
238 |
Q |
|
|
||||| |
|
|
T |
11072737 |
aaata |
11072741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 342
Target Start/End: Original strand, 11066249 - 11066455
Alignment:
Q |
135 |
tgaaattgactcaaaatttgatggatgaaaaagattgttg-ttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaa |
233 |
Q |
|
|
||||||||||||| ||||||||||||||| || ||||||| | ||||| ||||| ||| |||||||||||||| ||| | || ||||||||||| | | |
|
|
T |
11066249 |
tgaaattgactcataatttgatggatgaagaatattgttgctaaaaaagataaatgatttgtttcaaatatatcttgtgctttcggaagattgttgttga |
11066348 |
T |
|
Q |
234 |
aaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatatttgaaacaaatatatttt |
333 |
Q |
|
|
||||| || ||| | | ||||| ||||||| || || |||||| | |||||||||||||||||||||||||| |||||||||| |||||||||| | |
|
|
T |
11066349 |
aaatacatttatggacaataaatatattttttta-ccatatgaagga-atatttgatgcaaatatatttttaaagagaatatttgatgcaaatatattat |
11066446 |
T |
|
Q |
334 |
gcactgaag |
342 |
Q |
|
|
|| |||||| |
|
|
T |
11066447 |
gcgctgaag |
11066455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 51943052 - 51943121
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
51943052 |
tgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
51943121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 746432 - 746501
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
746432 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
746501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 41848814 - 41848883
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
41848814 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
41848883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 42991963 - 42992032
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || |||||||||||||||||||||| | |||||||||||||||||| |
|
|
T |
42991963 |
tgactcaaaatttgatggatggagaatattgttgttaaaaatataaaaggtttgtttcaaatatattttg |
42992032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 53918240 - 53918171
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
53918240 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
53918171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 25533117 - 25533185
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatatttt |
209 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| ||||||||||||||||| |
|
|
T |
25533117 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatttt |
25533185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 303
Target Start/End: Complemental strand, 54287625 - 54287489
Alignment:
Q |
165 |
aagattgttgttaaaaatataaaagatatgtttcaaatatattttgcgattctagaagattgttgctaaaaatatatccatgaatagtaaatgtattttt |
264 |
Q |
|
|
|||||||||| |||||||||||||||| |||||||||||||||| | | ||| | ||||||| || | ||||||||| ||| ||| ||||| |||||| |
|
|
T |
54287625 |
aagattgttgctaaaaatataaaagatttgtttcaaatatatttcgtgcttccaaaagattgctgttgaaaatatatttatggataataaatacattttt |
54287526 |
T |
|
Q |
265 |
gtacccgaatgaagaagatatttgatgcaaatatatttt |
303 |
Q |
|
|
||| | | |||||| | |||||||||||||||||||||| |
|
|
T |
54287525 |
gta-ctgtatgaagga-atatttgatgcaaatatatttt |
54287489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 455583 - 455652
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
455583 |
tgactcaaaatttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
455652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 457960 - 458029
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
457960 |
tgactcaaaatttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
458029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 1313092 - 1313161
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||| ||| |||||||||||||||||| |
|
|
T |
1313092 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaatgatttgtttcaaatatattttg |
1313161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 10622117 - 10622052
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
10622117 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
10622052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 53916072 - 53916003
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||| ||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
53916072 |
tgactcaaaatttgagggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
53916003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 4104473 - 4104409
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatata |
205 |
Q |
|
|
||||||||||||||||||| ||| || ||||||| |||||||||||||||| ||||||||||||| |
|
|
T |
4104473 |
tgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatata |
4104409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 6561623 - 6561687
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatata |
205 |
Q |
|
|
|||||| |||||||||||||||| || ||||||| |||||||||||||||| ||||||||||||| |
|
|
T |
6561623 |
tgactcgaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatata |
6561687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 42989962 - 42990030
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatatttt |
209 |
Q |
|
|
||||||||||||||||||||| | || ||||||| ||||||||||||| || ||||||||||||||||| |
|
|
T |
42989962 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatatttt |
42990030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 27636196 - 27636133
Alignment:
Q |
147 |
aaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||| | || ||||||| ||||||||||||| || ||||||||||||||||| |
|
|
T |
27636196 |
aaaatttgatggatggagaatattgttgctaaaaatataaaatattagtttcaaatatattttg |
27636133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 12019168 - 12019233
Alignment:
Q |
177 |
aaaaatataaaagatatgtttcaaatat-attttgcgattctagaagattgttgctaaaaatatat |
241 |
Q |
|
|
||||||| ||||||| |||||||||||| |||||||| ||| || ||||||||||||||| ||||| |
|
|
T |
12019168 |
aaaaatagaaaagatttgtttcaaatataattttgcgtttcaaggagattgttgctaaaattatat |
12019233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 41848938 - 41848970
Alignment:
Q |
284 |
atttgatgcaaatatatttttaaaaggaatatt |
316 |
Q |
|
|
|||||||||||||||||||| |||||||||||| |
|
|
T |
41848938 |
atttgatgcaaatatattttgaaaaggaatatt |
41848970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 23)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 5779224 - 5779148
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
|||||||||||| |||||||||| |||||| |||||| ||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
5779224 |
ttgaaattgacttaaaatttgatagatgaagaagattattgctaaaaatataaaagatttgtttcaaatatattttg |
5779148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 17415890 - 17415822
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatatttt |
209 |
Q |
|
|
||||||||||||||||||||||| || ||||||| |||||||||||||||| ||||||||||||||||| |
|
|
T |
17415890 |
tgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatatttt |
17415822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 18511792 - 18511723
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||||| || ||||||| |||||||||||||||| |||||| ||||||||||| |
|
|
T |
18511792 |
tgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcgaatatattttg |
18511723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 18596336 - 18596405
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
18596336 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
18596405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 25803717 - 25803786
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
25803717 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
25803786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 27912229 - 27912298
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
27912229 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
27912298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 15551935 - 15552000
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
15551935 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
15552000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 18468708 - 18468777
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||| ||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
18468708 |
tgactcaaaatttgatggatggagaatatttttgctaaaaatataaaagatttgtttcaaatatattttg |
18468777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 26097431 - 26097500
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| ||||||||||||| || |||||||||||||||||| |
|
|
T |
26097431 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatattttg |
26097500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 26098831 - 26098762
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||| ||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
26098831 |
tgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttg |
26098762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 27910145 - 27910214
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||| ||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
27910145 |
tgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttg |
27910214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 40221292 - 40221361
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||| || |||||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
40221292 |
tgactcaaaatttaattgatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
40221361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 3373620 - 3373555
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatat |
206 |
Q |
|
|
||||||| ||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
3373620 |
tgactcagaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat |
3373555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 6662023 - 6661954
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||| |||| |||||||||||| || ||||||| ||||||||||||| || |||||||||||||||||| |
|
|
T |
6662023 |
tgacttaaaacttgatggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttg |
6661954 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 18509897 - 18509828
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| | |||| ||||||||||| |
|
|
T |
18509897 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcgaatatattttg |
18509828 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 21288541 - 21288608
Alignment:
Q |
143 |
actcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||| | || ||||||| |||||||| ||||||| ||||| |||||||||||| |
|
|
T |
21288541 |
actcaaaatttgatggatggagaatattgttgctaaaaataaaaaagatttgtttaaaatatattttg |
21288608 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 353
Target Start/End: Complemental strand, 5779112 - 5779040
Alignment:
Q |
284 |
atttgatgcaaatatattttta---aaaggaatatttgaaacaaatatattttgcactgaaggagaaagaaaa |
353 |
Q |
|
|
||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| ||||||| |
|
|
T |
5779112 |
atttgatgcaaatatattttttttgaaagaaatatttgatgcaaatatattttgcactgaaggaggaagaaaa |
5779040 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 368
Target Start/End: Original strand, 32520231 - 32520381
Alignment:
Q |
218 |
agaagattgttgctaaaaatatatccatgaatagtaaa--tgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatat |
315 |
Q |
|
|
|||||||||||||| ||||||||| ||| | |||||| | |||||||||||| | | |||||| | |||||||||||| |||||||||||| ||||| |
|
|
T |
32520231 |
agaagattgttgctgaaaatatatttatgtagagtaaaaatatatttttgtacc-gtacgaagaaaa-atttgatgcaaacatatttttaaaataaatat |
32520328 |
T |
|
Q |
316 |
ttgaaacaaatatattttgcactgaaggagaaagaaaagacgtatcttcagcg |
368 |
Q |
|
|
|| | |||||||||||||| || ||||||| | || | || ||||||||||| |
|
|
T |
32520329 |
ttaatgcaaatatattttgcgcttaaggagagaaaacaaacatatcttcagcg |
32520381 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 10586549 - 10586608
Alignment:
Q |
151 |
tttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
10586549 |
tttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
10586608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 32520202 - 32520253
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatata |
185 |
Q |
|
|
||||||| |||| ||||||||||||||||| |||||||||| | |||||||| |
|
|
T |
32520202 |
ttgaaatagacttaaaatttgatggatgaagaagattgttgctgaaaatata |
32520253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 15143252 - 15143360
Alignment:
Q |
218 |
agaagattgttgctaaaaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatatttttaaaaggaatattt |
317 |
Q |
|
|
|||| ||||||||||||||||||| ||| | | ||||| ||||||||||| | ||||| | | |||||||||||||||||||| ||| ||||||||| |
|
|
T |
15143252 |
agaatattgttgctaaaaatatatttatggacaataaatacatttttgtaccata-tgaagga-agatttgatgcaaatatattttgaaagggaatattt |
15143349 |
T |
|
Q |
318 |
gaaacaaatat |
328 |
Q |
|
|
|| ||||||| |
|
|
T |
15143350 |
gatgcaaatat |
15143360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 15143230 - 15143274
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatata |
185 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||| |
|
|
T |
15143230 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatata |
15143274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 18466421 - 18466465
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatata |
185 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||| |
|
|
T |
18466421 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatata |
18466465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1674 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1674
Description:
Target: scaffold1674; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 85 - 16
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
85 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
16 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0468 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0468
Description:
Target: scaffold0468; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 2175 - 2106
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
2175 |
tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
2106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 134 - 305
Target Start/End: Complemental strand, 58002 - 57834
Alignment:
Q |
134 |
ttgaaattgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattt--tgcgattctagaagattgttgct |
231 |
Q |
|
|
||||||||||||||||||||||||||||| | |||||| ||||| |||||||||| ||||| | |||| ||| || | ||| |||||||||||| | |
|
|
T |
58002 |
ttgaaattgactcaaaatttgatggatgatga--attgtttctaaaagtataaaagatttgttttatatattttttgtgtgcttccagaagattgttgtt |
57905 |
T |
|
Q |
232 |
aaaaatatatccatgaatagtaaatgtatttttgtacccgaatgaagaagatatttgatgcaaatatattttta |
305 |
Q |
|
|
||||||||| ||||| | ||||| |||||||||| ||| ||||||| | |||||||||||||||||||||| |
|
|
T |
57904 |
gaaaatatatgtatgaacaataaatatatttttgta-ccgtatgaaga--aaatttgatgcaaatatattttta |
57834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0511 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0511
Description:
Target: scaffold0511; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 1745 - 1814
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||| ||| ||| || ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
1745 |
tgactcaaaatttgaaggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg |
1814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 4558 - 4623
Alignment:
Q |
143 |
actcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattt |
208 |
Q |
|
|
||||||||||||||||||||| || ||||||| |||||||||||||||| |||||| ||||||||| |
|
|
T |
4558 |
actcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcgaatatattt |
4623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 51719 - 51788
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||||||| | || | ||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
51719 |
tgactcaaaatttgatggatggagaataatgttgctaaaaatataaaagatttgtttcaaatatattttg |
51788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 50169 - 50230
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaat |
202 |
Q |
|
|
||||||||||||||||||||||| || | ||||| |||||||||||||||| |||||||||| |
|
|
T |
50169 |
tgactcaaaatttgatggatgaagaataatgttgctaaaaatataaaagatttgtttcaaat |
50230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0154 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0154
Description:
Target: scaffold0154; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 12047 - 11982
Alignment:
Q |
145 |
tcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatattttg |
210 |
Q |
|
|
||||||||||||||||| | || ||||||| ||||||||||||| || |||||||||||||||||| |
|
|
T |
12047 |
tcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatattttg |
11982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 78893 - 78961
Alignment:
Q |
141 |
tgactcaaaatttgatggatgaaaaagattgttgttaaaaatataaaagatatgtttcaaatatatttt |
209 |
Q |
|
|
||||| ||||||||||||||| | || ||||||| |||||||||||||||| ||| ||||||||||||| |
|
|
T |
78893 |
tgacttaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtctcaaatatatttt |
78961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0533 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0533
Description:
Target: scaffold0533; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 2263 - 2199
Alignment:
Q |
178 |
aaaatataaaagatatgtttcaaatatattttgc-gattctagaagattgttgctaaaaatatat |
241 |
Q |
|
|
|||||||||||||| ||||||||||||||||| | ||| || ||||||||||| ||||||||| |
|
|
T |
2263 |
aaaatataaaagatttgtttcaaatatatttttatgtttcaagtagattgttgctgaaaatatat |
2199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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