View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: R108-tnk88-15 (Length: 777)
Name: R108-tnk88-15
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] R108-tnk88-15 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 446; Significance: 0; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 1 - 522
Target Start/End: Original strand, 44141131 - 44141652
Alignment:
| Q |
1 |
cagaggagattttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
44141131 |
cagaggagattttgaaagagaatcctagtgtttgtgaatacatggcaccttcattggatgctaggcaagacatggtggtggtagaggtacctagactagg |
44141230 |
T |
|
| Q |
101 |
gaaggaggctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaa |
200 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| | |
|
|
| T |
44141231 |
gaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgtagacatgcctgga |
44141330 |
T |
|
| Q |
201 |
actgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
44141331 |
gctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggcacggtccttcgtt |
44141430 |
T |
|
| Q |
301 |
tggctaaagatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcactt |
400 |
Q |
| |
|
||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
44141431 |
tggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtctgttctgaagtcactgcagtcacatttcgcggccctagtgatactcactt |
44141530 |
T |
|
| Q |
401 |
ggacagccttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatg |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44141531 |
ggacagccttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatg |
44141630 |
T |
|
| Q |
501 |
gtttggactgcacaaacaattg |
522 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
44141631 |
gtttggactgcacaaacaattg |
44141652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 1 - 522
Target Start/End: Original strand, 44128504 - 44129025
Alignment:
| Q |
1 |
cagaggagattttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
44128504 |
cagaggagattttgaaagagaatcctagtgtttgtgaatacatggcaccttcattggatgctaggcaagacatggtggtggtagaggtacctagactagg |
44128603 |
T |
|
| Q |
101 |
gaaggaggctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaa |
200 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| | |
|
|
| T |
44128604 |
gaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgtagacatgcctgga |
44128703 |
T |
|
| Q |
201 |
actgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
44128704 |
gctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggcacggtccttcgtt |
44128803 |
T |
|
| Q |
301 |
tggctaaagatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcactt |
400 |
Q |
| |
|
||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
44128804 |
tggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtctgttctgaagtcactgcagtcacatttcgcggccctagtgatactcactt |
44128903 |
T |
|
| Q |
401 |
ggacagccttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatg |
500 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44128904 |
ggacagccttgttggacaggccctatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatg |
44129003 |
T |
|
| Q |
501 |
gtttggactgcacaaacaattg |
522 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
44129004 |
gtttggactgcacaaacaattg |
44129025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 1 - 522
Target Start/End: Original strand, 44132709 - 44133230
Alignment:
| Q |
1 |
cagaggagattttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
44132709 |
cagaggagattttgaaagagaatcctagtgtttgtgaatacatggcaccttcattggatgctaggcaagacatggtggtggtagaggtacctagactagg |
44132808 |
T |
|
| Q |
101 |
gaaggaggctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaa |
200 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| | |
|
|
| T |
44132809 |
gaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgtagacatgcctgga |
44132908 |
T |
|
| Q |
201 |
actgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
44132909 |
gctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggcacggtccttcgtt |
44133008 |
T |
|
| Q |
301 |
tggctaaagatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcactt |
400 |
Q |
| |
|
||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
44133009 |
tggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtctgttctgaagtcactgcagtcacatttcgcggccctagtgatactcactt |
44133108 |
T |
|
| Q |
401 |
ggacagccttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatg |
500 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44133109 |
ggacagccttgttggacaggccctatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatg |
44133208 |
T |
|
| Q |
501 |
gtttggactgcacaaacaattg |
522 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
44133209 |
gtttggactgcacaaacaattg |
44133230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 517 - 777
Target Start/End: Original strand, 44128248 - 44128508
Alignment:
| Q |
517 |
caattgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaag |
616 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44128248 |
caattgtgttgaacaaagcacatatcctgatttctacttcaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaag |
44128347 |
T |
|
| Q |
617 |
tattttttccctctaccttagatactttccatttaaatatattttgctatctttacattggtttcttatcacccaagttttgttgaactaatatcatctt |
716 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
44128348 |
tattttttccctctaccttagatactttccatttaaatatattttgctatctttacattggtttcttaacacccaagttttgttgaactaatatcatctt |
44128447 |
T |
|
| Q |
717 |
ttcataattcccttcaggtgataaatctatgatcaagaggagatatatgtacctaacagag |
777 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44128448 |
ttcataattcccttcaggtgataaatctatgatcaagaggagatatatgtacctaacagag |
44128508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 517 - 777
Target Start/End: Original strand, 44132453 - 44132713
Alignment:
| Q |
517 |
caattgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaag |
616 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44132453 |
caattgtgttgaacaaagcacatatcctgatttctacttcaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaag |
44132552 |
T |
|
| Q |
617 |
tattttttccctctaccttagatactttccatttaaatatattttgctatctttacattggtttcttatcacccaagttttgttgaactaatatcatctt |
716 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
44132553 |
tattttttccctctaccttagatactttccatttaaatatattttgctatctttacattggtttcttaacacccaagttttgttgaactaatatcatctt |
44132652 |
T |
|
| Q |
717 |
ttcataattcccttcaggtgataaatctatgatcaagaggagatatatgtacctaacagag |
777 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44132653 |
ttcataattcccttcaggtgataaatctatgatcaagaggagatatatgtacctaacagag |
44132713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 517 - 777
Target Start/End: Original strand, 44140875 - 44141135
Alignment:
| Q |
517 |
caattgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaag |
616 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44140875 |
caattgtgttgaacaaagcacatatcctgatttctacttcaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaag |
44140974 |
T |
|
| Q |
617 |
tattttttccctctaccttagatactttccatttaaatatattttgctatctttacattggtttcttatcacccaagttttgttgaactaatatcatctt |
716 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
44140975 |
tattttttccctctaccttagatactttccatttaaatatattttgctatctttacattggtttcttaacacccaagttttgttgaactaatatcatctt |
44141074 |
T |
|
| Q |
717 |
ttcataattcccttcaggtgataaatctatgatcaagaggagatatatgtacctaacagag |
777 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44141075 |
ttcataattcccttcaggtgataaatctatgatcaagaggagatatatgtacctaacagag |
44141135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 387; Significance: 0; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 4 - 522
Target Start/End: Complemental strand, 46707177 - 46706659
Alignment:
| Q |
4 |
aggagattttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaa |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
46707177 |
aggagattttgaaagagaatcccagtgtttgtgaatatatggcaccttcattggatgccaggcaagacatggtggtggtagaggtacctagactagggaa |
46707078 |
T |
|
| Q |
104 |
ggaggctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaact |
203 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| |||||||||| | || |
|
|
| T |
46707077 |
ggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattacccacttaatcgtttgcactactagtggtgtagacatgcctggagct |
46706978 |
T |
|
| Q |
204 |
gattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttgg |
303 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
46706977 |
gattaccaactcacaaaactcttcggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggcacggggcttcgtttgg |
46706878 |
T |
|
| Q |
304 |
ctaaagatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcacttgga |
403 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
46706877 |
ctaacgatttggctgagaacaacaaaggtgcccgtgtattggttgtttgttctgaagtcactgcagtcacattccgcggccctagtgatactcacttgga |
46706778 |
T |
|
| Q |
404 |
cagccttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtt |
503 |
Q |
| |
|
|||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
46706777 |
cagccttgttgggcaagcactgtttggagtcagagctgctgcacttattgttggttctgatccagtaccagaaattgagaaacctatatttgagatggtt |
46706678 |
T |
|
| Q |
504 |
tggactgcacaaacaattg |
522 |
Q |
| |
|
|||||| |||||||||||| |
|
|
| T |
46706677 |
tggacttcacaaacaattg |
46706659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 1 - 522
Target Start/End: Original strand, 5310327 - 5310848
Alignment:
| Q |
1 |
cagaggagattttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagg |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
5310327 |
cagaggagattttgaaagaaaatcctagtgtttgtgaatacatggcaccttcattggatgcaaggcaagacatggtggtggtagaggtacctagactagg |
5310426 |
T |
|
| Q |
101 |
gaaggaggctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaa |
200 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | |
|
|
| T |
5310427 |
aaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctgga |
5310526 |
T |
|
| Q |
201 |
actgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtt |
300 |
Q |
| |
|
||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||| |
|
|
| T |
5310527 |
gctgattatcaactcacaaaactcttgggccttcgtccatatgtgaaaaggtatatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtt |
5310626 |
T |
|
| Q |
301 |
tggctaaagatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcactt |
400 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| |
|
|
| T |
5310627 |
tggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacatttcgtggccccagtgatactcactt |
5310726 |
T |
|
| Q |
401 |
ggacagccttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatg |
500 |
Q |
| |
|
||||||||||||||| |||||| | |||||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
5310727 |
ggacagccttgttgggcaagcattgtttggagatggagctgctgctcttattgttggttctgacccagtaccagaaattgagaaacctatatttgagatg |
5310826 |
T |
|
| Q |
501 |
gtttggactgcacaaacaattg |
522 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
5310827 |
gtttggactgcacaaacaattg |
5310848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 9 - 522
Target Start/End: Complemental strand, 5289881 - 5289368
Alignment:
| Q |
9 |
attttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaaggagg |
108 |
Q |
| |
|
||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||| |
|
|
| T |
5289881 |
attttgaaagaaaatccaagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagactaggaaaggagg |
5289782 |
T |
|
| Q |
109 |
ctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactgatta |
208 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | | ||||| |
|
|
| T |
5289781 |
ctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctggagccgatta |
5289682 |
T |
|
| Q |
209 |
ccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggctaaa |
308 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||||||| ||| |
|
|
| T |
5289681 |
tcaactcacaaaactcttgggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtttggccaaa |
5289582 |
T |
|
| Q |
309 |
gatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcacttggacagcc |
408 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
5289581 |
gatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagcc |
5289482 |
T |
|
| Q |
409 |
ttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggac |
508 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
5289481 |
ttgttgggcaagcactgtttggagatggagctgctgctcttattgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggac |
5289382 |
T |
|
| Q |
509 |
tgcacaaacaattg |
522 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5289381 |
tgcacaaacaattg |
5289368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 9 - 522
Target Start/End: Original strand, 5315049 - 5315562
Alignment:
| Q |
9 |
attttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaaggagg |
108 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
5315049 |
attttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagactagggaaggagg |
5315148 |
T |
|
| Q |
109 |
ctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactgatta |
208 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | | ||||| |
|
|
| T |
5315149 |
ctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgttgacatgcctggagcagatta |
5315248 |
T |
|
| Q |
209 |
ccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggctaaa |
308 |
Q |
| |
|
|||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||| || ||||||||||| |||||||||||| |
|
|
| T |
5315249 |
tcaactcaccaaactattaggtcttcgcccatatgtgaaaagatacatgatgtaccaacaagggtgctttgcaggtggcacggtgctccgtttggctaaa |
5315348 |
T |
|
| Q |
309 |
gatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcacttggacagcc |
408 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| || ||||||||||||||||| ||||||| |
|
|
| T |
5315349 |
gatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacatttcgtggtcctagtgatactcacttagacagcc |
5315448 |
T |
|
| Q |
409 |
ttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggac |
508 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| || |||||||| || || |||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
5315449 |
ttgttggacaagcactatttggagatggagcggctgctcttattgttggctctgacccagtaccagaaatagagaaacctatatttgagatggtttggac |
5315548 |
T |
|
| Q |
509 |
tgcacaaacaattg |
522 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5315549 |
tgcacaaacaattg |
5315562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 9 - 522
Target Start/End: Original strand, 5302434 - 5302947
Alignment:
| Q |
9 |
attttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaaggagg |
108 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||| |
|
|
| T |
5302434 |
attttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagactaggaaaggagg |
5302533 |
T |
|
| Q |
109 |
ctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactgatta |
208 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||| ||||||| |
|
|
| T |
5302534 |
ctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcccgaagctgatta |
5302633 |
T |
|
| Q |
209 |
ccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggctaaa |
308 |
Q |
| |
|
|||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| || ||||| || |||||||||||||||||||| ||| |
|
|
| T |
5302634 |
tcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtttggccaaa |
5302733 |
T |
|
| Q |
309 |
gatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcacttggacagcc |
408 |
Q |
| |
|
||| | || |||||||||||||||||||||||||||||||| ||||| || ||||| || || |||||||| |||||||||||||||||||||||||| | |
|
|
| T |
5302734 |
gatctagctgagaacaacaaaggtgctcgtgtgttggttgtatgttcagaggtcaccgctgtcacatttcgtggccctagtgatactcacttggacagtc |
5302833 |
T |
|
| Q |
409 |
ttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggac |
508 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || |||||||| || || || |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
5302834 |
ttgttggacaagcactatttggagatggagctgctgctcttattgttggctctgaccccgtaccagaaattgagaaacctatatttgagatggtttggac |
5302933 |
T |
|
| Q |
509 |
tgcacaaacaattg |
522 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5302934 |
tgcacaaacaattg |
5302947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 9 - 522
Target Start/End: Original strand, 5284246 - 5284759
Alignment:
| Q |
9 |
attttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaaggagg |
108 |
Q |
| |
|
||||||||| | ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||||| |
|
|
| T |
5284246 |
attttgaaaaaaaatcctagtgtttgtgaatacatggccccttcattggatgcaaggcaagacatggtggtggtagaggtacctagactaggaaaggagg |
5284345 |
T |
|
| Q |
109 |
ctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactgatta |
208 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | | ||||| |
|
|
| T |
5284346 |
ctgcagtgaaggctataaaagaatggggccaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctggagccgatta |
5284445 |
T |
|
| Q |
209 |
ccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggctaaa |
308 |
Q |
| |
|
|||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| || ||||| || || ||||| ||||||||||| ||| |
|
|
| T |
5284446 |
tcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaa |
5284545 |
T |
|
| Q |
309 |
gatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcacttggacagcc |
408 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| |||||||| ||||||||||| ||||| | |
|
|
| T |
5284546 |
gatttagctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacatttcgtggccctagcgatactcacttagacagtc |
5284645 |
T |
|
| Q |
409 |
ttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggac |
508 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || |||||||| || || ||| ||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
5284646 |
ttgttggacaagcactatttggagatggagctgctgctcttattgttggctctgacccaataccagaaattgagagacctatatttgagatggtttggac |
5284745 |
T |
|
| Q |
509 |
tgcacaaacaattg |
522 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5284746 |
tgcacaaacaattg |
5284759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 518 - 620
Target Start/End: Complemental strand, 5290183 - 5290081
Alignment:
| Q |
518 |
aattgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaagt |
617 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||||||||| |
|
|
| T |
5290183 |
aattgtgttgaacaaagcacttatcctgatttttactttaaaattacaaatagtgaacacaaaactgaactcaaagagaaatttcagcgcatgtgtaagt |
5290084 |
T |
|
| Q |
618 |
att |
620 |
Q |
| |
|
||| |
|
|
| T |
5290083 |
att |
5290081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 518 - 620
Target Start/End: Original strand, 5302132 - 5302234
Alignment:
| Q |
518 |
aattgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaagt |
617 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||||||||| |
|
|
| T |
5302132 |
aattgtgttgaacaaagcacttatcctgatttttactttaaaattacaaatagtgaacacaaaactgaactcaaagagaaatttcagcgcatgtgtaagt |
5302231 |
T |
|
| Q |
618 |
att |
620 |
Q |
| |
|
||| |
|
|
| T |
5302232 |
att |
5302234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 518 - 620
Target Start/End: Original strand, 5309769 - 5309871
Alignment:
| Q |
518 |
aattgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaagt |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || |||||||| || ||||||||||||| |
|
|
| T |
5309769 |
aattgtgttgaacaaagcacatatcctgatttttactttaaaatcacaaatagtgaacacaaaactgaacttaaggagaaatttcagcgcatgtgtaagt |
5309868 |
T |
|
| Q |
618 |
att |
620 |
Q |
| |
|
||| |
|
|
| T |
5309869 |
att |
5309871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 518 - 620
Target Start/End: Original strand, 5283944 - 5284046
Alignment:
| Q |
518 |
aattgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaagt |
617 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
5283944 |
aattgtgttgaacaaagcacgtatcctgatttttactttaaaatcacaaacagtgaacacaaaactgaacttaaagagaaatttcagcgcatgtgtaagt |
5284043 |
T |
|
| Q |
618 |
att |
620 |
Q |
| |
|
||| |
|
|
| T |
5284044 |
att |
5284046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 518 - 620
Target Start/End: Original strand, 5314586 - 5314688
Alignment:
| Q |
518 |
aattgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaagt |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| || ||||||||||||| |
|
|
| T |
5314586 |
aattgtgttgaacaaagcacatatcctgatttttactttaaaattacaaatagtgaacacaaagttgaactcaaagagaaatttcagcgcatgtgtaagt |
5314685 |
T |
|
| Q |
618 |
att |
620 |
Q |
| |
|
||| |
|
|
| T |
5314686 |
att |
5314688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 702 - 774
Target Start/End: Complemental strand, 46707251 - 46707179
Alignment:
| Q |
702 |
aactaatatcatcttttcataattcccttcaggtgataaatctatgatcaagaggagatatatgtacctaaca |
774 |
Q |
| |
|
||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
46707251 |
aactaatatcatcctatcataattaccttcaggtgataaatctatgatcaagaggagatacatgtacctaaca |
46707179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 728 - 777
Target Start/End: Original strand, 5310282 - 5310331
Alignment:
| Q |
728 |
cttcaggtgataaatctatgatcaagaggagatatatgtacctaacagag |
777 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
5310282 |
cttcaggtgataaatctatgatcaagaggagatacatgtatctaacagag |
5310331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 728 - 776
Target Start/End: Original strand, 5284193 - 5284241
Alignment:
| Q |
728 |
cttcaggtgataaatctatgatcaagaggagatatatgtacctaacaga |
776 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
5284193 |
cttcaggtgataaatctatgatcaagaggagatacatgtatctaacaga |
5284241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 728 - 776
Target Start/End: Original strand, 5314996 - 5315044
Alignment:
| Q |
728 |
cttcaggtgataaatctatgatcaagaggagatatatgtacctaacaga |
776 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
5314996 |
cttcaggtgataaatctatgatcaagaggagatacatgtatctaacaga |
5315044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 728 - 776
Target Start/End: Complemental strand, 5289934 - 5289886
Alignment:
| Q |
728 |
cttcaggtgataaatctatgatcaagaggagatatatgtacctaacaga |
776 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| |||||||| |
|
|
| T |
5289934 |
cttcaggtgataaatccatgatcaagaggagatacatgtatctaacaga |
5289886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 728 - 776
Target Start/End: Original strand, 5302381 - 5302429
Alignment:
| Q |
728 |
cttcaggtgataaatctatgatcaagaggagatatatgtacctaacaga |
776 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| |||||||| |
|
|
| T |
5302381 |
cttcaggtgataaatccatgatcaagaggagatacatgtatctaacaga |
5302429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 364; Significance: 0; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 1 - 520
Target Start/End: Original strand, 1504907 - 1505426
Alignment:
| Q |
1 |
cagaggagattttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagg |
100 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
1504907 |
cagaggagattttaaaagagaatcccagtgtttgtgaatacatggcaccttcattggatgctaggcaagacatggtggtggtagaggtacctagactagg |
1505006 |
T |
|
| Q |
101 |
gaaggaggctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaa |
200 |
Q |
| |
|
||||||||||| | || |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| | |
|
|
| T |
1505007 |
aaaggaggctgccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaattgtttgcaccacaagtggtgtagacatgcctgga |
1505106 |
T |
|
| Q |
201 |
actgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtt |
300 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||| || ||||| || || ||||||||||||| |
|
|
| T |
1505107 |
gctgattaccaactcaccaaactcttaggtcttcgcccatatgtgaagaggtacatgatgtaccagcaaggatgttttgcaggtgggacggtgcttcgtt |
1505206 |
T |
|
| Q |
301 |
tggctaaagatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcactt |
400 |
Q |
| |
|
|||| || || ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1505207 |
tggccaaggacttggctgagaacaacaaaggtgcccgtgtgttggttgtctgttccgaagtcactgcagtcacatttcgcggccctagtgatactcactt |
1505306 |
T |
|
| Q |
401 |
ggacagccttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatg |
500 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| |
|
|
| T |
1505307 |
ggacagccttgttggacaagctctatttggagatggagctgctgcactaattgttggttcagatccaataccagaaattgagaaacctatatttgaaatg |
1505406 |
T |
|
| Q |
501 |
gtttggactgcacaaacaat |
520 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
1505407 |
gtttggactgcacaaacaat |
1505426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 1 - 522
Target Start/End: Original strand, 1492098 - 1492619
Alignment:
| Q |
1 |
cagaggagattttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagg |
100 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| |||| |
|
|
| T |
1492098 |
cagaggagattttaaaagagaatcctaatgtttgtgaatacatggcaccttcattggatgctagacaagacatggtggtggtagaagtacctagactagg |
1492197 |
T |
|
| Q |
101 |
gaaggaggctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaa |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||| |
|
|
| T |
1492198 |
gaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagcggtgtagacatgcctggg |
1492297 |
T |
|
| Q |
201 |
actgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtt |
300 |
Q |
| |
|
| ||||| |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| |||||||| ||||| || |||||||| ||||||| |
|
|
| T |
1492298 |
gccgattatcaactcactaaactcttaggtcttcgtccatatgtaaaaagatacatgatgtaccagcaaggttgttttgcaggtggcacggtacttcgtt |
1492397 |
T |
|
| Q |
301 |
tggctaaagatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcactt |
400 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || || |||||||| ||||| |
|
|
| T |
1492398 |
tggctaaggatttggctgagaacaacaaaggtgctcgtgtgttagttgtttgttctgaagtcactgcagtcacatttcgtggtcccagtgatacacactt |
1492497 |
T |
|
| Q |
401 |
ggacagccttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatg |
500 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||| |||||||||||||| ||||| |||||||||||| |
|
|
| T |
1492498 |
ggacagtcttgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatg |
1492597 |
T |
|
| Q |
501 |
gtttggactgcacaaacaattg |
522 |
Q |
| |
|
||||||| ||||||||||||| |
|
|
| T |
1492598 |
atttggacagcacaaacaattg |
1492619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 6 - 522
Target Start/End: Original strand, 1482128 - 1482644
Alignment:
| Q |
6 |
gagattttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaagg |
105 |
Q |
| |
|
|||||||||||||| ||||||||||| || || |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| |||| |
|
|
| T |
1482128 |
gagattttgaaagaaaatcctagtgtatgcgaatacatggcaccttcattggatgctaggcaagacatggtggtggtagaggtgcctagactaggaaagg |
1482227 |
T |
|
| Q |
106 |
aggctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactga |
205 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||| |||| ||||| ||||||| |||||||||| | || |
|
|
| T |
1482228 |
aggctgcagtgaaggctataaaagaatggggccaaccaaaatcaaagattacacacttaatattttgtaccacaagtggtgtagacatgcctggtgccga |
1482327 |
T |
|
| Q |
206 |
ttaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggct |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||||| || || ||||||||||||||||| |
|
|
| T |
1482328 |
ttaccaactcacaaaactcttaggtcttcgtccatatgtgaagagatacatgatgtaccaacaaggatgctttgcaggtgggacggtgcttcgtttggcc |
1482427 |
T |
|
| Q |
306 |
aaagatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcacttggaca |
405 |
Q |
| |
|
|| || ||||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||| ||||| || || |||||||||||||| ||||||| |
|
|
| T |
1482428 |
aaggacttggctgagaataataaaggtgctcgtgtgttggttgtttgttctgaagttactgcagtgacattccgtggtcctagtgatactcatttggaca |
1482527 |
T |
|
| Q |
406 |
gccttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttg |
505 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1482528 |
gtcttgttggacaagcactctttggagatggagctgctgcactcattgttggttctgacccaataccagaaattgagaaacctatatttgagatggtttg |
1482627 |
T |
|
| Q |
506 |
gactgcacaaacaattg |
522 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
1482628 |
gactgcacaaacaattg |
1482644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 9 - 522
Target Start/End: Original strand, 1477937 - 1478450
Alignment:
| Q |
9 |
attttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaaggagg |
108 |
Q |
| |
|
||||||||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||| |||| ||||||| |
|
|
| T |
1477937 |
attttgaaagaaaatccaagtgtatgtgaatacatggcaccgtcattggatgctaggcaggacatggtggtggtagaagtacctagactaggaaaggagg |
1478036 |
T |
|
| Q |
109 |
ctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactgatta |
208 |
Q |
| |
|
|||||| ||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||| |||||||||| ||||||| |||||||||| ||||||| |
|
|
| T |
1478037 |
ctgcagtgaaagctataaaagaatggggccaaccaaaatcaaagattacacacttgatcttttgcaccacaagtggtgtagacatgcctggcgctgatta |
1478136 |
T |
|
| Q |
209 |
ccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggctaaa |
308 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || || ||||||||||||||||| || |
|
|
| T |
1478137 |
ccaactcaccaaactcttaggtcttcgtccatatgtgaagaggtatatgatgtaccaacaaggatgttttgcaggtgggacggtgcttcgtttggccaag |
1478236 |
T |
|
| Q |
309 |
gatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcacttggacagcc |
408 |
Q |
| |
|
|| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| || || |||||||||||||| |||||||| | |
|
|
| T |
1478237 |
gacttggctgagaacaataaaggtgctcgtgtgttggttgtttgttctgaagttactgcagtgacattccgtggtcctagtgatactcatttggacagtc |
1478336 |
T |
|
| Q |
409 |
ttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggac |
508 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
1478337 |
ttgttggacaagcactatttggagatggtgctgctgcactcattgttggttctgacccaataccagaaattgagaaacctatatttgagatggtttggac |
1478436 |
T |
|
| Q |
509 |
tgcacaaacaattg |
522 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
1478437 |
tgcacaaacaattg |
1478450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 1 - 522
Target Start/End: Original strand, 1509054 - 1509575
Alignment:
| Q |
1 |
cagaggagattttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagg |
100 |
Q |
| |
|
|||| |||||||||||||||||||| | |||||||| || | |||||| |||||||||||||||||||||||||||| ||| |||||||||| |||| |
|
|
| T |
1509054 |
cagaagagattttgaaagagaatcccaatgtttgtgcttatacggcaccatcattggatgctaggcaagacatggtggttgtaaaggtacctaggctagg |
1509153 |
T |
|
| Q |
101 |
gaaggaggctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaa |
200 |
Q |
| |
|
|| |||| ||||| ||||||||||||||||||||| || ||||| ||||||||||| || |||||| |||||||||| ||||||| ||| ||| ||| | |
|
|
| T |
1509154 |
aaaagaggttgcagtgaaggctataaaagaatggggccagccaaaatcaaagattacacatttaatcttttgcaccacaagtggtgttgatatgtctgga |
1509253 |
T |
|
| Q |
201 |
actgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtt |
300 |
Q |
| |
|
|| |||| ||||| || ||||| |||||||||| |||||||| |||||||| ||||||||||||||| | || ||||| || ||||| ||||||| || |
|
|
| T |
1509254 |
gctcattatcaacttaccaaacttttaggtcttcacccatatgtaaaaaggtacatgatgtaccaacaaaggtgttttgcaggtggcactgtgcttcatt |
1509353 |
T |
|
| Q |
301 |
tggctaaagatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcactt |
400 |
Q |
| |
|
|||| || |||||||| || || ||| ||| ||||||||||||||||||||||||| |||||| |||||| |||||| | |||||| |||||||||| || |
|
|
| T |
1509354 |
tggcaaaggatttggctgaaaataaccaagatgctcgtgtgttggttgtttgttctaaagtcattgcagtcacattttgtggccctggtgatactcattt |
1509453 |
T |
|
| Q |
401 |
ggacagccttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatg |
500 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| | || || |||||||||||||||||| | |||||||||||| |
|
|
| T |
1509454 |
ggacagtcttgttggacaagcattatttggagatggagctgctgcactcattgttggtactgaccctgtaccagaaattgagaaatctatatttgagatg |
1509553 |
T |
|
| Q |
501 |
gtttggactgcacaaacaattg |
522 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
1509554 |
gtttggactgcacaaacaattg |
1509575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 46 - 522
Target Start/End: Original strand, 1499215 - 1499691
Alignment:
| Q |
46 |
caccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaaggaggctgcagcgaaggctataaaagaatggggtcaaccaaa |
145 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||| ||||||| |||||||| |||||||||||||||||| ||||||||| |||||||||||||||| || |
|
|
| T |
1499215 |
caccttctttggatgctaggcaagacatgatggcggtagagatacctagactagggaaggaggctgcagtgaaggctatcgaagaatggggtcaaccgaa |
1499314 |
T |
|
| Q |
146 |
gtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactgattaccaactcacaaaactcttaggtcttcgtccatatgtg |
245 |
Q |
| |
|
|||||| ||||| || ||||| |||||||| ||||||| |||||||||| | ||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
1499315 |
gtcaaatattacacatttaattttttgcacctatagtggtgtagacatgcctggtgcggattaccaactaacaaaactcttaggtcttaacccatatgtg |
1499414 |
T |
|
| Q |
246 |
aaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggctaaagatttggcggagaacaacaaaggtgctcgtgtgttgg |
345 |
Q |
| |
|
|||||||| ||||||||||||| ||| || | ||| || || || || ||||||||||| || || || || ||||| |||||||||||||||||||||| |
|
|
| T |
1499415 |
aaaaggtacatgatgtaccaactagggtgttatgcaggtggaacagtacttcgtttggcgaaggacttagctgagaataacaaaggtgctcgtgtgttgg |
1499514 |
T |
|
| Q |
346 |
ttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcacttggacagccttgttggacaagcactatttggagatggagctgctgc |
445 |
Q |
| |
|
|||||||||||||| |||||||| | ||||| | || |||||| |||||||| | ||| ||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
1499515 |
ttgtttgttctgaaatcactgcaatctcattttgtggacctagtaatactcacctacacaaacttgttggacaagcaatatttggagatggagctgcggc |
1499614 |
T |
|
| Q |
446 |
actaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggactgcacaaacaattg |
522 |
Q |
| |
|
| | |||||||| || || | |||||| |||||||||||||| |||||||| | |||||||||||||||||||||| |
|
|
| T |
1499615 |
agtcattgttggctctgacctagtacctgaaattgagaaacctttatttgagttagtttggactgcacaaacaattg |
1499691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 9 - 520
Target Start/End: Original strand, 1486608 - 1487119
Alignment:
| Q |
9 |
attttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaaggagg |
108 |
Q |
| |
|
||||||||||||||||||| | |||| || ||| ||||||| ||||||||||||||||||||||||| | ||| || ||||| |||| || |||| |
|
|
| T |
1486608 |
attttgaaagagaatcctaatttttgcacttatatgacaccttctttggatgctaggcaagacatggtggtgcgagacgtgcctaggctaggaaatgagg |
1486707 |
T |
|
| Q |
109 |
ctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactgatta |
208 |
Q |
| |
|
|||||| ||| ||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||| ||||||| | |||||||| | ||||| |
|
|
| T |
1486708 |
ctgcagtgaaagctataaaagaatagggccaaccaaagtcaaagattacacacttaatattttgcaccatgagtggtataggcatgcctggtgccgatta |
1486807 |
T |
|
| Q |
209 |
ccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggctaaa |
308 |
Q |
| |
|
||||||||||||||||||||||||| | || |||||||| |||||||||| ||||||||||| |||||||| || ||||| || || |||| ||| || |
|
|
| T |
1486808 |
ccaactcacaaaactcttaggtctttgcccggatgtgaaacggtatatgatataccaacaaggatgctttgcagggggcactgttctacgttaggccaag |
1486907 |
T |
|
| Q |
309 |
gatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttac-atttcgcggccctagtgatactcacttggacagc |
407 |
Q |
| |
|
|| ||||| |||||||| |||| ||||| ||||||||| | ||||||||||||||| || | || |||| | ||||||| ||| ||| || || || | |
|
|
| T |
1486908 |
gacttggctgagaacaataaagatgctcttgtgttggtaatatgttctgaagtcactaca-tcactattttgtggccctaatgaaactgacatgagcaac |
1487006 |
T |
|
| Q |
408 |
cttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttgga |
507 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||| || | | |||||||| || ||||| || || ||||||||||||| | |||||| | ||||||| |
|
|
| T |
1487007 |
cttgttggacaagcattatttggtgatggagctgttgtagtcattgttggctccgatccgatatcaaaaattgagaaacctctctttgagcttgtttgga |
1487106 |
T |
|
| Q |
508 |
ctgcacaaacaat |
520 |
Q |
| |
|
||||||||||||| |
|
|
| T |
1487107 |
ctgcacaaacaat |
1487119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 518 - 625
Target Start/End: Original strand, 1504435 - 1504542
Alignment:
| Q |
518 |
aattgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaagt |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
1504435 |
aattgtgttgaacaaagcacatatcctgatttctactttagaatcacaaacagtgaacacaaaactgaactcaaagagaaatttcaacgcatgtgtaagt |
1504534 |
T |
|
| Q |
618 |
attttttc |
625 |
Q |
| |
|
||||||| |
|
|
| T |
1504535 |
gttttttc |
1504542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 521 - 619
Target Start/End: Original strand, 1491674 - 1491772
Alignment:
| Q |
521 |
tgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaagtat |
619 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||||||||||||||||| |
|
|
| T |
1491674 |
tgtgttgaacaaagcacatatcctgatttttactttaaaatcacaaatagcgaacacaaaactgagctcaaagaaaaatttcaacgcatgtgtaagtat |
1491772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 672 - 777
Target Start/End: Original strand, 1504807 - 1504911
Alignment:
| Q |
672 |
cattggtttcttatcacccaagttttgttgaactaatatcatcttttcataattcccttcaggtgataaatctatgatcaagaggagatatatgtaccta |
771 |
Q |
| |
|
||||| |||| |||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
1504807 |
cattgatttcgtatcacccaaattt-gttgaactaatatcatctcttcataattaccttcaggtgataaatctatgattaagagaagatacatgtaccta |
1504905 |
T |
|
| Q |
772 |
acagag |
777 |
Q |
| |
|
|||||| |
|
|
| T |
1504906 |
acagag |
1504911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 521 - 620
Target Start/End: Original strand, 1477673 - 1477772
Alignment:
| Q |
521 |
tgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaagtatt |
620 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||| |||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
1477673 |
tgtgttgaacaaagcacatatcctgatttttacttcaaaatcacaaacagtgagcacaaagttgaacttaaagaaaaatttcaacgcatgtgtaagtatt |
1477772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 521 - 624
Target Start/End: Original strand, 1481784 - 1481887
Alignment:
| Q |
521 |
tgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaagtatt |
620 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || || ||||||||||| ||||| ||||||||||||||||| | |
|
|
| T |
1481784 |
tgtgttgaacaaagcacatatcctgatttttactttaaaatcacaaacagtgagcataaagtcgaactcaaagaaaaatttcaacgcatgtgtaagtact |
1481883 |
T |
|
| Q |
621 |
tttt |
624 |
Q |
| |
|
|||| |
|
|
| T |
1481884 |
tttt |
1481887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 518 - 620
Target Start/End: Original strand, 1485517 - 1485621
Alignment:
| Q |
518 |
aattgtgttgaacaaagcacatatcctgatttc--tactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaa |
615 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| | |||| ||||||| || |||||||| |||||| ||||||||| || ||||| ||||| |
|
|
| T |
1485517 |
aattgtgttgaacaaagcacatatcctgatttctatacttcagaatcgcaaatagcgagcacaagacgcaactcagagagaaatttcagcgcatttgtaa |
1485616 |
T |
|
| Q |
616 |
gtatt |
620 |
Q |
| |
|
||||| |
|
|
| T |
1485617 |
gtatt |
1485621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 518 - 618
Target Start/End: Original strand, 1496881 - 1496981
Alignment:
| Q |
518 |
aattgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaagt |
617 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||| || | | ||||||| | ||| |||||||||||| | ||| |||||||||| ||||| ||| ||| |
|
|
| T |
1496881 |
aattgtattgaacaaagcacatatcctgatctctatttcagagtcacaaacaatgagcacaagactgaattaaaaaagaaattccagcgcatatgttagt |
1496980 |
T |
|
| Q |
618 |
a |
618 |
Q |
| |
|
| |
|
|
| T |
1496981 |
a |
1496981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 728 - 767
Target Start/End: Original strand, 1482078 - 1482117
Alignment:
| Q |
728 |
cttcaggtgataaatctatgatcaagaggagatatatgta |
767 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
1482078 |
cttcaggtgataaatctatgatcaagaggagatacatgta |
1482117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 728 - 767
Target Start/End: Original strand, 1477884 - 1477923
Alignment:
| Q |
728 |
cttcaggtgataaatctatgatcaagaggagatatatgta |
767 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
1477884 |
cttcaggtgataaatccatgatcaagaggagatacatgta |
1477923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 42 - 520
Target Start/End: Complemental strand, 24163941 - 24163463
Alignment:
| Q |
42 |
atggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaaggaggctgcagcgaaggctataaaagaatggggtcaac |
141 |
Q |
| |
|
||||||||||| |||||| |||||||||||||||||| ||||||| ||| ||| |||| |||||||| || | ||||||||||||||||||||| |||| |
|
|
| T |
24163941 |
atggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaagaatggggccaac |
24163842 |
T |
|
| Q |
142 |
caaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactgattaccaactcacaaaactcttaggtcttcgtccata |
241 |
Q |
| |
|
||||||||||||| || |||||||| ||||||| | ||||||| || ||||||| | |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
24163841 |
caaagtcaaagatcacacacttaatattttgcactataagtggtgtagatatgcctggtgccgattaccaactcacaaaactcttaggtcttcgcccatg |
24163742 |
T |
|
| Q |
242 |
tgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggctaaagatttggcggagaacaacaaaggtgctcgtgtg |
341 |
Q |
| |
|
||| |||||||||||||||||||||||||| || ||||| || |||||||| ||||| ||||| || || ||||| ||||||||||||||| |||||||| |
|
|
| T |
24163741 |
tgtaaaaaggtatatgatgtaccaacaagggtgttttgcaggtggcacggtacttcgcttggccaaggacttggctgagaacaacaaaggttctcgtgtg |
24163642 |
T |
|
| Q |
342 |
ttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcacttggacagccttgttggacaagcactatttggagatggagctg |
441 |
Q |
| |
|
|||||||||||||||||||| || ||| | |||||| | || || || ||||||||||| |||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
24163641 |
ttggttgtttgttctgaagttaccgcaatcacattttgtggaccaagcgatactcacttagacaaccttgttggacaagctctatttggagatggagctg |
24163542 |
T |
|
| Q |
442 |
ctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggactgcacaaacaat |
520 |
Q |
| |
|
||||| | |||||||| || || ||| ||| |||||||||||||| |||||||| | |||||||| ||||||||||| |
|
|
| T |
24163541 |
ctgcagtcattgttggctctgacccaatacaggaaattgagaaacctctatttgagttagtttggacagcacaaacaat |
24163463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 521 - 620
Target Start/End: Complemental strand, 24165535 - 24165436
Alignment:
| Q |
521 |
tgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaagtatt |
620 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | ||||||| || || ||||||| |||||||||| ||||| |||||||| |||||||||| |
|
|
| T |
24165535 |
tgtgttgaacaaagcacatatcctgatttctactttagagtcacaaacagcgagcacaagatcaaactcaaagaaaaatttcaacgcatttgtaagtatt |
24165436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 732 - 773
Target Start/End: Complemental strand, 24164023 - 24163982
Alignment:
| Q |
732 |
aggtgataaatctatgatcaagaggagatatatgtacctaac |
773 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
24164023 |
aggtgataaaactatgatcaagaggagatacatgtacctaac |
24163982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 163; Significance: 1e-86; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 6 - 520
Target Start/End: Complemental strand, 37863577 - 37863063
Alignment:
| Q |
6 |
gagattttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaagg |
105 |
Q |
| |
|
||||||||||| |||||||||||| | |||||||| ||||||||||| |||||||| || || || ||||||| || || ||||| | |||| || | |
|
|
| T |
37863577 |
gagattttgaaggagaatcctagtttatgtgagtatatggcaccttcgttggatgcaagacaggatatggtggttgtggaagtaccaaagctaggaaaag |
37863478 |
T |
|
| Q |
106 |
aggctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactga |
205 |
Q |
| |
|
|||||||| | |||||||| || |||||||||||||| ||||||||||||||||| |||| |||||||||| ||||||| || ||||||| |||| |
|
|
| T |
37863477 |
aggctgcaacaaaggctatcaaggaatggggtcaacctaagtcaaagattactcatctaattttttgcaccacaagtggtgtggatatgcctggtgctga |
37863378 |
T |
|
| Q |
206 |
ttaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggct |
305 |
Q |
| |
|
|| || |||||||| ||||| |||||||| || |||||||| | ||||||||||| ||||||||||| ||||| || || |||||||||||||||||| |
|
|
| T |
37863377 |
ctatcagctcacaaagctcttgggtcttcgcccgtatgtgaagcgttatatgatgtatcaacaaggttgttttgctggtgggacggtgcttcgtttggct |
37863278 |
T |
|
| Q |
306 |
aaagatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcacttggaca |
405 |
Q |
| |
|
||||||||||| || ||||||||||| |||||||| ||||| |||||||| || ||||||||||||| || || || |||||||||||||| | || | |
|
|
| T |
37863277 |
aaagatttggctgaaaacaacaaaggcgctcgtgttttggtggtttgttcggagatcactgcagttactttccgtggacctagtgatactcatcttgata |
37863178 |
T |
|
| Q |
406 |
gccttgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttg |
505 |
Q |
| |
|
| ||||| || || ||| | ||||||||||| || || || | ||||||||||||||||| | |||||| ||||||| || | ||||| ||||||| |
|
|
| T |
37863177 |
gtcttgtggggcaggcattgtttggagatggtgcagcagctgtgattgttggttcagatccgttgccagaagttgagaagcctttgtttgaattggtttg |
37863078 |
T |
|
| Q |
506 |
gactgcacaaacaat |
520 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
37863077 |
gactgcacaaacaat |
37863063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 13 - 517
Target Start/End: Complemental strand, 37859544 - 37859040
Alignment:
| Q |
13 |
tgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagggaaggaggctgc |
112 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||||||||||||||| || ||||||||||||| || |||||||| ||| |||| || ||||| || |
|
|
| T |
37859544 |
tgaaagagaatccaagtgtatgcgagtacatggcaccttcattggatgcaagacaagacatggtggttgtggaggtaccaagactaggaaaagaggcagc |
37859445 |
T |
|
| Q |
113 |
agcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactgattaccaa |
212 |
Q |
| |
|
| | ||||| || || |||||||||||||| ||||| |||||||| ||| | ||| |||||||||| ||||| | |||||||| | | || || || |
|
|
| T |
37859444 |
aacaaaggccatcaaggaatggggtcaacctaagtccaagattacccacctcatcttttgcaccaccagtggcgtggacatgcccggtgccgactatcag |
37859345 |
T |
|
| Q |
213 |
ctcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggctaaagatt |
312 |
Q |
| |
|
|| ||||| ||||| || ||||||||||||||||| | || |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| | |
|
|
| T |
37859344 |
ctgacaaagctcttgggccttcgtccatatgtgaagcgttacatgatgtaccaacaaggttgttttgctggtggcacggtgcttcgtttggctaaagact |
37859245 |
T |
|
| Q |
313 |
tggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcacttggacagccttgt |
412 |
Q |
| |
|
|||| || |||||||||||||||||||||||||| |||||||| || | ||||||||||| || || || || ||||| ||||| | || |||||||| |
|
|
| T |
37859244 |
tggctgaaaacaacaaaggtgctcgtgtgttggtagtttgttcagagataactgcagttactttccgtggacccagtgacactcatcttgatagccttgt |
37859145 |
T |
|
| Q |
413 |
tggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggactgca |
512 |
Q |
| |
|
|| |||||| | ||||||||||| || || || | || || |||||||| ||| ||||| || |||||||||| | ||||| |||| ||||||||| |
|
|
| T |
37859144 |
ggggcaagcattgtttggagatggtgcagcagctgtgatcgtaggttcagacccattaccacaagttgagaaacccttgtttgaattggtatggactgca |
37859045 |
T |
|
| Q |
513 |
caaac |
517 |
Q |
| |
|
||||| |
|
|
| T |
37859044 |
caaac |
37859040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 117 - 344
Target Start/End: Original strand, 39030117 - 39030344
Alignment:
| Q |
117 |
aaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaaactgattaccaactca |
216 |
Q |
| |
|
|||||||| || |||||||||||||| ||||||| | ||||||| | || ||||||| | ||||||| || ||||||| | |||| || || |||| |
|
|
| T |
39030117 |
aaggctatcaatgaatggggtcaacctaagtcaatggttactcatctcatattttgcacttcaagtggtgtcgatatgcctggagctgactatcagctca |
39030216 |
T |
|
| Q |
217 |
caaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtttggctaaagatttggc |
316 |
Q |
| |
|
|||| |||||||| ||| |||||||||| || | ||||||||||||||||||||||| ||||| || | | || ||||| ||||||||||||||||| |
|
|
| T |
39030217 |
caaagctcttaggcctttgtccatatgtaaagcgttatatgatgtaccaacaaggttgttttgctggtgcgatggctcttcgcttggctaaagatttggc |
39030316 |
T |
|
| Q |
317 |
ggagaacaacaaaggtgctcgtgtgttg |
344 |
Q |
| |
|
||||||||||||||||| ||||||||| |
|
|
| T |
39030317 |
tgagaacaacaaaggtgcccgtgtgttg |
39030344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 521 - 616
Target Start/End: Complemental strand, 37863811 - 37863716
Alignment:
| Q |
521 |
tgtgttgaacaaagcacatatcctgatttctactttaaaatcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaag |
616 |
Q |
| |
|
|||||||| || || ||||||||||| || ||||| |||||||| ||||||||||| |||||||||| ||| |||||||| |||||||||||| |
|
|
| T |
37863811 |
tgtgttgatcagagtacatatcctgacttttacttccgtatcacaaacagtgaacacaaaactgaactcagagaaaaattccagcgcatgtgtaag |
37863716 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 560 - 616
Target Start/End: Complemental strand, 37859782 - 37859726
Alignment:
| Q |
560 |
atcacaaatagtgaacacaagactgaactcaaagagaaattccaacgcatgtgtaag |
616 |
Q |
| |
|
|||||||| |||||||| |||||||| |||||||| ||||| || |||||||||||| |
|
|
| T |
37859782 |
atcacaaacagtgaacataagactgagctcaaagaaaaatttcagcgcatgtgtaag |
37859726 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 98; Significance: 7e-48; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 1 - 442
Target Start/End: Original strand, 35250741 - 35251182
Alignment:
| Q |
1 |
cagaggagattttgaaagagaatcctagtgtttgtgagtacatggcaccttcattggatgctaggcaagacatggtgggggtagaggtacctagattagg |
100 |
Q |
| |
|
||||||| ||| ||||||| ||||| | | | |||| ||||||||||| ||||||||||| || ||||| ||||||| |||||||| || || ||||| |
|
|
| T |
35250741 |
cagaggaaattctgaaagaaaatcccaatatgtgtgcttacatggcaccatcattggatgcaagacaagatatggtggtagtagaggtgccaaggttagg |
35250840 |
T |
|
| Q |
101 |
gaaggaggctgcagcgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacgagtggtgctgacatgcctgaa |
200 |
Q |
| |
|
|| || || ||| | || || || || |||||||||||||||||||| ||||| |||||| | || |||||| || ||||||| || ||||||| |
|
|
| T |
35250841 |
aaaagaagcagcaacaaaagcgatcaaggaatggggtcaaccaaagtccaagatcactcacctcatattttgcattactagtggtgtggatatgcctggt |
35250940 |
T |
|
| Q |
201 |
actgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgccggaggcacggtgcttcgtt |
300 |
Q |
| |
|
||||||| || ||||||||| | |||| |||||||| | |||||| | |||||||||||||||||||| || || || || || | ||| ||||||| |
|
|
| T |
35250941 |
gctgattatcagctcacaaaattgctaggacttcgtccgtcggtgaaacgttatatgatgtaccaacaagggtgtttcgctggtggtatggttcttcgtt |
35251040 |
T |
|
| Q |
301 |
tggctaaagatttggcggagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcactgcagttacatttcgcggccctagtgatactcactt |
400 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||| | || |||||||| || |||||||||| || ||||| ||||||||||| || || | |
|
|
| T |
35251041 |
tggctaaagatttggctgagaacaataaaggtgctcgtgttcttgtggtttgttcagagatcactgcagtgacttttcgtggccctagtgacacccatct |
35251140 |
T |
|
| Q |
401 |
ggacagccttgttggacaagcactatttggagatggagctgc |
442 |
Q |
| |
|
|| || || || ||||||||| | ||||||||||| ||||| |
|
|
| T |
35251141 |
tgatagtctcgtgggacaagcattgtttggagatggcgctgc |
35251182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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